RNA–Protein interactions for RNA: ENST00000638787.1

NECAP1-212, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,067 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-212ENST00000638787 H3BQ85 93 aa4.98□□□□□ -1.61
NECAP1-212ENST00000638787 TPRXLQ17RH7 258 aa4.98□□□□□ -1.61
NECAP1-212ENST00000638787 Q5XG85 94 aa4.98□□□□□ -1.61
NECAP1-212ENST00000638787 KRTAP4-2Q9BYR5 136 aa4.98□□□□□ -1.61
NECAP1-212ENST00000638787 JMJD7-PLA2G4BH0Y9G9 81 aa4.96□□□□□ -1.61
NECAP1-212ENST00000638787 TMEM256-PLSCR3K7ERE1 68 aa4.96□□□□□ -1.61
NECAP1-212ENST00000638787 RNF213Q63HN8 5207 aa4.96□□□□□ -1.62
NECAP1-212ENST00000638787 KRTAP4-9Q9BYQ8 210 aa4.95□□□□□ -1.62
NECAP1-212ENST00000638787 KRTAP13-3Q3SY46 172 aa4.95□□□□□ -1.62
NECAP1-212ENST00000638787 C1orf195Q5TG92 126 aa4.94□□□□□ -1.62
NECAP1-212ENST00000638787 FAM236AA0A1B0GUQ0 79 aa4.93□□□□□ -1.62
NECAP1-212ENST00000638787 FAM236BA0A1B0GV22 79 aa4.93□□□□□ -1.62
NECAP1-212ENST00000638787 CCDC179H3BU77 68 aa4.92□□□□□ -1.62
NECAP1-212ENST00000638787 CCKP06307 115 aa4.92□□□□□ -1.62
NECAP1-212ENST00000638787 ASB16-AS1Q495Z4 193 aa4.92□□□□□ -1.62
NECAP1-212ENST00000638787 C14orf132Q9NPU4 83 aa4.92□□□□□ -1.62
NECAP1-212ENST00000638787 A0A1W2PNM2 257 aa4.91□□□□□ -1.62
NECAP1-212ENST00000638787 UQCRQO14949 82 aa4.91□□□□□ -1.62
NECAP1-212ENST00000638787 ATOX1O00244 68 aa4.9□□□□□ -1.62
NECAP1-212ENST00000638787 HIST1H4AP62805 103 aaKnown RBP4.9□□□□□ -1.62
NECAP1-212ENST00000638787 LINC00846Q9NV44 126 aa4.9□□□□□ -1.63
NECAP1-212ENST00000638787 SS18L2Q9UHA2 77 aa4.9□□□□□ -1.63
NECAP1-212ENST00000638787 A0A087WSZ3 146 aa4.89□□□□□ -1.63
NECAP1-212ENST00000638787 RBM3P98179 157 aaKnown RBP4.89□□□□□ -1.63
NECAP1-212ENST00000638787 ATP5EP2Q5VTU8 51 aa4.89□□□□□ -1.63
NECAP1-212ENST00000638787 TRBV7-4A0A0J9YYF1 115 aa4.88□□□□□ -1.63
NECAP1-212ENST00000638787 PDE6GP18545 87 aa4.88□□□□□ -1.63
NECAP1-212ENST00000638787 C9orf92A6NGG3 77 aa4.87□□□□□ -1.63
NECAP1-212ENST00000638787 COX7CP15954 63 aa4.87□□□□□ -1.63
NECAP1-212ENST00000638787 DSCR8Q96T75 97 aa4.87□□□□□ -1.63
NECAP1-212ENST00000638787 MUC17Q685J3 4493 aa4.87□□□□□ -1.63
NECAP1-212ENST00000638787 LOC110117498A0A087WWA1 95 aa4.87□□□□□ -1.63
NECAP1-212ENST00000638787 UBL5Q9BZL1 73 aa4.86□□□□□ -1.63
NECAP1-212ENST00000638787 Q96NJ1 140 aa4.84□□□□□ -1.63
NECAP1-212ENST00000638787 IGKV3D-7A0A0C4DH55 119 aa4.84□□□□□ -1.64
NECAP1-212ENST00000638787 Q6ZQT0 140 aa4.84□□□□□ -1.64
NECAP1-212ENST00000638787 SERP2Q8N6R1 65 aa4.84□□□□□ -1.64
NECAP1-212ENST00000638787 MUC2Q02817 5179 aa4.83□□□□□ -1.64
NECAP1-212ENST00000638787 SEC61BP60468 96 aaKnown RBP4.82□□□□□ -1.64
NECAP1-212ENST00000638787 CXCL6P80162 114 aa4.8□□□□□ -1.64
NECAP1-212ENST00000638787 A0A087WVE0 104 aa4.79□□□□□ -1.64
NECAP1-212ENST00000638787 IGKV4-1P06312 121 aa4.79□□□□□ -1.64
NECAP1-212ENST00000638787 KRTAP5-3Q6L8H2 238 aa4.79□□□□□ -1.64
NECAP1-212ENST00000638787 LINC00472Q9H8W2 130 aa4.79□□□□□ -1.64
NECAP1-212ENST00000638787 RPS28P62857 69 aaKnown RBP4.79□□□□□ -1.64
NECAP1-212ENST00000638787 DEFB116Q30KQ4 102 aa4.79□□□□□ -1.64
NECAP1-212ENST00000638787 SMIM20Q8N5G0 67 aa4.79□□□□□ -1.64
NECAP1-212ENST00000638787 A0A1B0GW54 56 aa4.78□□□□□ -1.64
NECAP1-212ENST00000638787 TMEM258P61165 79 aa4.77□□□□□ -1.65
NECAP1-212ENST00000638787 RPL37P61927 97 aaKnown RBP4.77□□□□□ -1.65
NECAP1-212ENST00000638787 Q6ZVQ6 151 aa4.77□□□□□ -1.65
NECAP1-212ENST00000638787 PCOTHQ58A44 107 aa4.76□□□□□ -1.65
NECAP1-212ENST00000638787 DSCR10P59022 87 aa4.76□□□□□ -1.65
NECAP1-212ENST00000638787 KRTAP4-1Q9BYQ7 146 aa4.76□□□□□ -1.65
NECAP1-212ENST00000638787 J3KT08 172 aa4.74□□□□□ -1.65
NECAP1-212ENST00000638787 Q75L30 129 aa4.74□□□□□ -1.65
NECAP1-212ENST00000638787 TRAV7A0A075B6U4 112 aa4.73□□□□□ -1.65
NECAP1-212ENST00000638787 IGHV6-1A0A0B4J1U7 121 aa4.73□□□□□ -1.65
NECAP1-212ENST00000638787 A0A0U1RQV1 116 aa4.73□□□□□ -1.65
NECAP1-212ENST00000638787 LINC00313P59037 77 aa4.73□□□□□ -1.65
NECAP1-212ENST00000638787 A0A1B0GVX0 72 aa4.73□□□□□ -1.65
NECAP1-212ENST00000638787 NREPQ16612 68 aa4.73□□□□□ -1.65
NECAP1-212ENST00000638787 NOTCH2NLQ7Z3S9 236 aa4.72□□□□□ -1.65
NECAP1-212ENST00000638787 C20orf166-AS1Q96NR2 134 aa4.72□□□□□ -1.65
NECAP1-212ENST00000638787 A8MUU9 505 aa4.71□□□□□ -1.65
NECAP1-212ENST00000638787 H3BS24 57 aa4.71□□□□□ -1.65
NECAP1-212ENST00000638787 KLKP1Q107X0 134 aa4.71□□□□□ -1.66
NECAP1-212ENST00000638787 KRTAP4-11Q9BYQ6 195 aa4.71□□□□□ -1.66
NECAP1-212ENST00000638787 KRTAP16-1A8MUX0 517 aa4.7□□□□□ -1.66
NECAP1-212ENST00000638787 C8orf87E5RJ46 101 aa4.7□□□□□ -1.66
NECAP1-212ENST00000638787 ATP11AUNQ6ZP68 121 aa4.7□□□□□ -1.66
NECAP1-212ENST00000638787 KRTAP9-8Q9BYQ0 159 aa4.7□□□□□ -1.66
NECAP1-212ENST00000638787 NDUFB1O75438 58 aa4.69□□□□□ -1.66
NECAP1-212ENST00000638787 CYSTM1Q9H1C7 97 aa4.69□□□□□ -1.66
NECAP1-212ENST00000638787 A8MWP4 228 aa4.69□□□□□ -1.66
NECAP1-212ENST00000638787 NDUFC1O43677 76 aa4.68□□□□□ -1.66
NECAP1-212ENST00000638787 C20orf197Q8N268 126 aa4.68□□□□□ -1.66
NECAP1-212ENST00000638787 FAT4Q6V0I7 4981 aa4.66□□□□□ -1.66
NECAP1-212ENST00000638787 H7BZZ5 65 aa4.66□□□□□ -1.66
NECAP1-212ENST00000638787 BPY2O14599 106 aa4.66□□□□□ -1.66
NECAP1-212ENST00000638787 PRR15Q8IV56 129 aa4.66□□□□□ -1.66
NECAP1-212ENST00000638787 C8orf17Q9NRJ1 99 aa4.66□□□□□ -1.66
NECAP1-212ENST00000638787 FAM236DA0A1B0GTK5 79 aa4.64□□□□□ -1.67
NECAP1-212ENST00000638787 FAM236CP0DP71 79 aa4.64□□□□□ -1.67
NECAP1-212ENST00000638787 K7EQZ3 153 aa4.63□□□□□ -1.67
NECAP1-212ENST00000638787 ATP5EP56381 51 aaPredicted RBP4.63□□□□□ -1.67
NECAP1-212ENST00000638787 MMP24-AS1A0A0U1RRL7 71 aa4.62□□□□□ -1.67
NECAP1-212ENST00000638787 KRTAP19-2Q3LHN2 52 aa4.61□□□□□ -1.67
NECAP1-212ENST00000638787 OCR1Q9BZK8 76 aa4.61□□□□□ -1.67
NECAP1-212ENST00000638787 SERP1Q9Y6X1 66 aa4.61□□□□□ -1.67
NECAP1-212ENST00000638787 Q8N9P0 234 aaPredicted RBP4.61□□□□□ -1.67
NECAP1-212ENST00000638787 TMEM254Q8TBM7 123 aa4.61□□□□□ -1.67
NECAP1-212ENST00000638787 Q8N9L7 120 aa4.6□□□□□ -1.67
NECAP1-212ENST00000638787 SNURFQ9Y675 71 aa4.6□□□□□ -1.67
NECAP1-212ENST00000638787 hDV103S1A0JD37 113 aa4.58□□□□□ -1.68
NECAP1-212ENST00000638787 ZCCHC13Q8WW36 166 aaKnown RBP4.58□□□□□ -1.68
NECAP1-212ENST00000638787 MRPL34Q9BQ48 92 aaKnown RBP4.58□□□□□ -1.68
NECAP1-212ENST00000638787 C5orf47Q569G3 176 aa4.58□□□□□ -1.68
NECAP1-212ENST00000638787 COX6B2Q6YFQ2 88 aa4.56□□□□□ -1.68
NECAP1-212ENST00000638787 SMIM26A0A096LP01 95 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms