RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 NOTCH2NLQ7Z3S9 236 aa10.5□□□□□ -0.73
HLA-A-209ENST00000638375 A8MWP4 228 aa10.49□□□□□ -0.73
HLA-A-209ENST00000638375 IGKV3D-7A0A0C4DH55 119 aa10.47□□□□□ -0.73
HLA-A-209ENST00000638375 LINC00313P59037 77 aa10.47□□□□□ -0.73
HLA-A-209ENST00000638375 UBL5Q9BZL1 73 aa10.47□□□□□ -0.73
HLA-A-209ENST00000638375 NDUFB1O75438 58 aa10.46□□□□□ -0.73
HLA-A-209ENST00000638375 BPY2O14599 106 aa10.45□□□□□ -0.74
HLA-A-209ENST00000638375 RPL37P61927 97 aaKnown RBP10.45□□□□□ -0.74
HLA-A-209ENST00000638375 RNF213Q63HN8 5207 aa10.44□□□□□ -0.74
HLA-A-209ENST00000638375 KRTAP16-1A8MUX0 517 aa10.44□□□□□ -0.74
HLA-A-209ENST00000638375 C8orf87E5RJ46 101 aa10.44□□□□□ -0.74
HLA-A-209ENST00000638375 SEC61BP60468 96 aaKnown RBP10.43□□□□□ -0.74
HLA-A-209ENST00000638375 PRR15Q8IV56 129 aa10.43□□□□□ -0.74
HLA-A-209ENST00000638375 FAM240AA0A1B0GVK7 77 aa10.41□□□□□ -0.74
HLA-A-209ENST00000638375 K7EQZ3 153 aa10.41□□□□□ -0.74
HLA-A-209ENST00000638375 ACYP1P07311 99 aa10.41□□□□□ -0.74
HLA-A-209ENST00000638375 Q75L30 129 aa10.41□□□□□ -0.74
HLA-A-209ENST00000638375 C20orf166-AS1Q96NR2 134 aa10.41□□□□□ -0.74
HLA-A-209ENST00000638375 A8MUU9 505 aa10.39□□□□□ -0.75
HLA-A-209ENST00000638375 C8orf17Q9NRJ1 99 aa10.39□□□□□ -0.75
HLA-A-209ENST00000638375 PCOTHQ58A44 107 aa10.38□□□□□ -0.75
HLA-A-209ENST00000638375 Q8N9L7 120 aa10.37□□□□□ -0.75
HLA-A-209ENST00000638375 MMP24-AS1A0A0U1RRL7 71 aa10.34□□□□□ -0.75
HLA-A-209ENST00000638375 KRTAP4-1Q9BYQ7 146 aa10.33□□□□□ -0.76
HLA-A-209ENST00000638375 CXCL6P80162 114 aa10.29□□□□□ -0.76
HLA-A-209ENST00000638375 ATP11AUNQ6ZP68 121 aa10.28□□□□□ -0.76
HLA-A-209ENST00000638375 J3QR89 54 aa10.27□□□□□ -0.77
HLA-A-209ENST00000638375 Q8N9P0 234 aaPredicted RBP10.27□□□□□ -0.77
HLA-A-209ENST00000638375 TMEM254Q8TBM7 123 aa10.26□□□□□ -0.77
HLA-A-209ENST00000638375 MUC2Q02817 5179 aa10.26□□□□□ -0.77
HLA-A-209ENST00000638375 hDV103S1A0JD37 113 aa10.25□□□□□ -0.77
HLA-A-209ENST00000638375 MRPL34Q9BQ48 92 aaKnown RBP10.24□□□□□ -0.77
HLA-A-209ENST00000638375 WFDC13Q8IUB5 93 aa10.23□□□□□ -0.77
HLA-A-209ENST00000638375 ATP5EP2Q5VTU8 51 aa10.21□□□□□ -0.77
HLA-A-209ENST00000638375 CASC2Q6XLA1 102 aa10.2□□□□□ -0.78
HLA-A-209ENST00000638375 LINC00643Q86TS7 51 aa10.2□□□□□ -0.78
HLA-A-209ENST00000638375 HCG22E2RYF7 251 aa10.19□□□□□ -0.78
HLA-A-209ENST00000638375 ZCCHC13Q8WW36 166 aaKnown RBP10.15□□□□□ -0.78
HLA-A-209ENST00000638375 K7ERU9 68 aa10.12□□□□□ -0.79
HLA-A-209ENST00000638375 NDUFS5O43920 106 aa10.12□□□□□ -0.79
HLA-A-209ENST00000638375 HIST1H4AP62805 103 aaKnown RBP10.09□□□□□ -0.79
HLA-A-209ENST00000638375 FAT4Q6V0I7 4981 aa10.05□□□□□ -0.8
HLA-A-209ENST00000638375 A0A087WVE0 104 aa10.04□□□□□ -0.8
HLA-A-209ENST00000638375 Q5W150 140 aa10.02□□□□□ -0.81
HLA-A-209ENST00000638375 A0A0U1RQV1 116 aa10.01□□□□□ -0.81
HLA-A-209ENST00000638375 KRTAP19-2Q3LHN2 52 aa10.01□□□□□ -0.81
HLA-A-209ENST00000638375 SPINK7P58062 85 aa9.96□□□□□ -0.82
HLA-A-209ENST00000638375 MT-ATP8P03928 68 aa9.95□□□□□ -0.82
HLA-A-209ENST00000638375 HRES1P13985 223 aa9.94□□□□□ -0.82
HLA-A-209ENST00000638375 LCE2CQ5TA81 110 aa9.94□□□□□ -0.82
HLA-A-209ENST00000638375 TP53AIP1Q9HCN2 124 aa9.94□□□□□ -0.82
HLA-A-209ENST00000638375 MPLKIPQ8TAP9 179 aa9.88□□□□□ -0.83
HLA-A-209ENST00000638375 IMUPQ9GZP8 106 aa9.87□□□□□ -0.83
HLA-A-209ENST00000638375 IGKV2D-30A0A075B6S6 120 aa9.86□□□□□ -0.83
HLA-A-209ENST00000638375 IGKV2-30P06310 120 aa9.86□□□□□ -0.83
HLA-A-209ENST00000638375 COX6B2Q6YFQ2 88 aa9.85□□□□□ -0.83
HLA-A-209ENST00000638375 C7orf65Q6ZTY9 151 aa9.84□□□□□ -0.83
HLA-A-209ENST00000638375 LCE2AQ5TA79 106 aaPredicted RBP9.83□□□□□ -0.84
HLA-A-209ENST00000638375 UQCRQO14949 82 aa9.81□□□□□ -0.84
HLA-A-209ENST00000638375 TRAV22A0A0B4J277 110 aa9.79□□□□□ -0.84
HLA-A-209ENST00000638375 OCR1Q9BZK8 76 aa9.79□□□□□ -0.84
HLA-A-209ENST00000638375 RBM12B-AS1Q9P1G2 102 aa9.79□□□□□ -0.84
HLA-A-209ENST00000638375 MT1HP80294 61 aa9.77□□□□□ -0.85
HLA-A-209ENST00000638375 FAM236DA0A1B0GTK5 79 aa9.75□□□□□ -0.85
HLA-A-209ENST00000638375 FAM236CP0DP71 79 aa9.75□□□□□ -0.85
HLA-A-209ENST00000638375 FLGP20930 4061 aaPredicted RBP9.75□□□□□ -0.85
HLA-A-209ENST00000638375 H0Y9P7 68 aa9.73□□□□□ -0.85
HLA-A-209ENST00000638375 SCGB1A1P11684 91 aa9.73□□□□□ -0.85
HLA-A-209ENST00000638375 FAM236AA0A1B0GUQ0 79 aa9.72□□□□□ -0.85
HLA-A-209ENST00000638375 FAM236BA0A1B0GV22 79 aa9.72□□□□□ -0.85
HLA-A-209ENST00000638375 LOC101927531A0A1B0GV80 90 aa9.68□□□□□ -0.86
HLA-A-209ENST00000638375 ATOX1O00244 68 aa9.68□□□□□ -0.86
HLA-A-209ENST00000638375 CYP4F30PQ9H0H9 118 aa9.68□□□□□ -0.86
HLA-A-209ENST00000638375 C4orf26Q17RF5 130 aa9.65□□□□□ -0.86
HLA-A-209ENST00000638375 C5orf47Q569G3 176 aa9.63□□□□□ -0.87
HLA-A-209ENST00000638375 MP68P56378 58 aa9.62□□□□□ -0.87
HLA-A-209ENST00000638375 C1orf64Q8NEQ6 169 aa9.62□□□□□ -0.87
HLA-A-209ENST00000638375 LINC00208Q96KT6 92 aa9.62□□□□□ -0.87
HLA-A-209ENST00000638375 M0R2T5 61 aa9.58□□□□□ -0.88
HLA-A-209ENST00000638375 SMIM20Q8N5G0 67 aa9.58□□□□□ -0.88
HLA-A-209ENST00000638375 TRAV7A0A075B6U4 112 aa9.57□□□□□ -0.88
HLA-A-209ENST00000638375 H3BPC8 53 aa9.55□□□□□ -0.88
HLA-A-209ENST00000638375 KRTAP3-1Q9BYR8 98 aa9.55□□□□□ -0.88
HLA-A-209ENST00000638375 H1FX-AS1Q4G0G2 97 aa9.54□□□□□ -0.88
HLA-A-209ENST00000638375 KLKP1Q107X0 134 aa9.52□□□□□ -0.89
HLA-A-209ENST00000638375 KRTAP10-6P60371 365 aaPredicted RBP9.5□□□□□ -0.89
HLA-A-209ENST00000638375 LORP23490 312 aaPredicted RBP9.48□□□□□ -0.89
HLA-A-209ENST00000638375 SERP2Q8N6R1 65 aa9.43□□□□□ -0.9
HLA-A-209ENST00000638375 SNURFQ9Y675 71 aa9.35□□□□□ -0.91
HLA-A-209ENST00000638375 S4R3F8 94 aa9.34□□□□□ -0.91
HLA-A-209ENST00000638375 C20orf197Q8N268 126 aa9.33□□□□□ -0.92
HLA-A-209ENST00000638375 KRTAP9-8Q9BYQ0 159 aa9.33□□□□□ -0.92
HLA-A-209ENST00000638375 A8MUN3 132 aa9.3□□□□□ -0.92
HLA-A-209ENST00000638375 LCA10Q71F78 164 aa9.3□□□□□ -0.92
HLA-A-209ENST00000638375 COX7CP15954 63 aa9.29□□□□□ -0.92
HLA-A-209ENST00000638375 MT2AP02795 61 aa9.25□□□□□ -0.93
HLA-A-209ENST00000638375 DMAC1Q96GE9 116 aa9.25□□□□□ -0.93
HLA-A-209ENST00000638375 KRTAP3-3Q9BYR6 98 aa9.25□□□□□ -0.93
HLA-A-209ENST00000638375 ANAPC13Q9BS18 74 aa9.22□□□□□ -0.93
HLA-A-209ENST00000638375 CSAG1Q6PB30 78 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms