RNA–Protein interactions for RNA: ENST00000638154.2

TCF4-290, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 7,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-290ENST00000638154 ATRQ13535 2644 aa2.62□□□□□ -1.99
TCF4-290ENST00000638154 FRYLO94915 3013 aa2.62□□□□□ -1.99
TCF4-290ENST00000638154 KRTAP1-5Q9BYS1 174 aa2.62□□□□□ -1.99
TCF4-290ENST00000638154 MKI67P46013 3256 aaKnown RBP2.61□□□□□ -1.99
TCF4-290ENST00000638154 MYO15AQ9UKN7 3530 aa2.61□□□□□ -1.99
TCF4-290ENST00000638154 SPTBN5Q9NRC6 3674 aaKnown RBP2.61□□□□□ -1.99
TCF4-290ENST00000638154 IGSF10Q6WRI0 2623 aa2.6□□□□□ -1.99
TCF4-290ENST00000638154 RPS29P62273 56 aaKnown RBP2.6□□□□□ -1.99
TCF4-290ENST00000638154 TRIOO75962 3097 aa2.59□□□□□ -2
TCF4-290ENST00000638154 ASPMQ8IZT6 3477 aa2.59□□□□□ -2
TCF4-290ENST00000638154 MAST4O15021 2626 aa2.59□□□□□ -2
TCF4-290ENST00000638154 WDFY4Q6ZS81 3184 aa2.58□□□□□ -2
TCF4-290ENST00000638154 CELSR3Q9NYQ7 3312 aa2.58□□□□□ -2
TCF4-290ENST00000638154 ANKRD11Q6UB99 2663 aaPredicted RBP2.58□□□□□ -2
TCF4-290ENST00000638154 UNC80Q8N2C7 3258 aa2.58□□□□□ -2
TCF4-290ENST00000638154 NBEAL2Q6ZNJ1 2754 aa2.58□□□□□ -2
TCF4-290ENST00000638154 TGP01266 2768 aa2.57□□□□□ -2
TCF4-290ENST00000638154 TEX15Q9BXT5 2789 aa2.57□□□□□ -2
TCF4-290ENST00000638154 DCHS1Q96JQ0 3298 aa2.57□□□□□ -2
TCF4-290ENST00000638154 LAMA5O15230 3695 aa2.56□□□□□ -2
TCF4-290ENST00000638154 MAP1AP78559 2803 aaPredicted RBP2.56□□□□□ -2
TCF4-290ENST00000638154 ITPR3Q14573 2671 aa2.56□□□□□ -2
TCF4-290ENST00000638154 LAMA3Q16787 3333 aa2.55□□□□□ -2
TCF4-290ENST00000638154 KMT2BQ9UMN6 2715 aaPredicted RBP2.54□□□□□ -2
TCF4-290ENST00000638154 EPPK1P58107 5090 aaKnown RBP2.54□□□□□ -2
TCF4-290ENST00000638154 SPENQ96T58 3664 aaKnown RBP2.54□□□□□ -2
TCF4-290ENST00000638154 ASH1LQ9NR48 2969 aaKnown RBP2.54□□□□□ -2
TCF4-290ENST00000638154 RELNP78509 3460 aa2.52□□□□□ -2.01
TCF4-290ENST00000638154 NBEAQ8NFP9 2946 aa2.51□□□□□ -2.01
TCF4-290ENST00000638154 FRYQ5TBA9 3013 aa2.51□□□□□ -2.01
TCF4-290ENST00000638154 COL12A1Q99715 3063 aa2.51□□□□□ -2.01
TCF4-290ENST00000638154 ALMS1Q8TCU4 4167 aa2.51□□□□□ -2.01
TCF4-290ENST00000638154 KRTAP10-1P60331 282 aa2.51□□□□□ -2.01
TCF4-290ENST00000638154 KRTAP10-6P60371 365 aaPredicted RBP2.5□□□□□ -2.01
TCF4-290ENST00000638154 KRTAP3-3Q9BYR6 98 aa2.5□□□□□ -2.01
TCF4-290ENST00000638154 KRTAP3-2Q9BYR7 98 aa2.5□□□□□ -2.01
TCF4-290ENST00000638154 KRTAP10-2P60368 255 aa2.49□□□□□ -2.01
TCF4-290ENST00000638154 HTTP42858 3142 aa2.48□□□□□ -2.01
TCF4-290ENST00000638154 VCANP13611 3396 aa2.47□□□□□ -2.01
TCF4-290ENST00000638154 OTOGQ6ZRI0 2925 aa2.47□□□□□ -2.01
TCF4-290ENST00000638154 DMXL1Q9Y485 3027 aa2.47□□□□□ -2.01
TCF4-290ENST00000638154 SPEGQ15772 3267 aa2.47□□□□□ -2.01
TCF4-290ENST00000638154 KRTAP3-1Q9BYR8 98 aa2.46□□□□□ -2.02
TCF4-290ENST00000638154 ZZEF1O43149 2961 aa2.46□□□□□ -2.02
TCF4-290ENST00000638154 FLNBO75369 2602 aaKnown RBP2.45□□□□□ -2.02
TCF4-290ENST00000638154 ZFHX4Q86UP3 3567 aa2.45□□□□□ -2.02
TCF4-290ENST00000638154 A0A1B0GVY2 172 aa2.45□□□□□ -2.02
TCF4-290ENST00000638154 RYR2Q92736 4967 aa2.44□□□□□ -2.02
TCF4-290ENST00000638154 CSMD1Q96PZ7 3565 aa2.44□□□□□ -2.02
TCF4-290ENST00000638154 TENM3Q9P273 2699 aa2.44□□□□□ -2.02
TCF4-290ENST00000638154 VPS13CQ709C8 3753 aa2.42□□□□□ -2.02
TCF4-290ENST00000638154 SMG1Q96Q15 3661 aaKnown RBP2.42□□□□□ -2.02
TCF4-290ENST00000638154 CFAP47Q6ZTR5 3102 aa2.41□□□□□ -2.02
TCF4-290ENST00000638154 CRYBG3Q68DQ2 2970 aa2.41□□□□□ -2.02
TCF4-290ENST00000638154 HIVEP1P15822 2718 aa2.41□□□□□ -2.02
TCF4-290ENST00000638154 FLNAP21333 2647 aaKnown RBP2.41□□□□□ -2.02
TCF4-290ENST00000638154 LAMA1P25391 3075 aa2.4□□□□□ -2.02
TCF4-290ENST00000638154 ATMQ13315 3056 aa2.4□□□□□ -2.03
TCF4-290ENST00000638154 NBPF19A0A087WUL8 3843 aa2.4□□□□□ -2.03
TCF4-290ENST00000638154 ITPR2Q14571 2701 aa2.39□□□□□ -2.03
TCF4-290ENST00000638154 UBR4Q5T4S7 5183 aa2.38□□□□□ -2.03
TCF4-290ENST00000638154 TACC2O95359 2948 aa2.38□□□□□ -2.03
TCF4-290ENST00000638154 AKAP9Q99996 3911 aa2.38□□□□□ -2.03
TCF4-290ENST00000638154 DCHS2Q6V1P9 2916 aa2.38□□□□□ -2.03
TCF4-290ENST00000638154 PDZD2O15018 2839 aa2.38□□□□□ -2.03
TCF4-290ENST00000638154 CELSR1Q9NYQ6 3014 aa2.37□□□□□ -2.03
TCF4-290ENST00000638154 NF1P21359 2839 aa2.36□□□□□ -2.03
TCF4-290ENST00000638154 DMXL2Q8TDJ6 3036 aa2.35□□□□□ -2.03
TCF4-290ENST00000638154 LOC400499M0QZD8 3231 aa2.35□□□□□ -2.03
TCF4-290ENST00000638154 BOD1L1Q8NFC6 3051 aa2.34□□□□□ -2.03
TCF4-290ENST00000638154 FLNCQ14315 2725 aa2.34□□□□□ -2.03
TCF4-290ENST00000638154 ADGRG4Q8IZF6 3080 aa2.34□□□□□ -2.03
TCF4-290ENST00000638154 EYSQ5T1H1 3165 aa2.34□□□□□ -2.04
TCF4-290ENST00000638154 KRTAP1-4P0C5Y4 121 aa2.34□□□□□ -2.04
TCF4-290ENST00000638154 KRTAP17-1Q9BYP8 105 aa2.33□□□□□ -2.04
TCF4-290ENST00000638154 LCE2DQ5TA82 110 aaPredicted RBP2.33□□□□□ -2.04
TCF4-290ENST00000638154 KRTAP10-5P60370 271 aa2.32□□□□□ -2.04
TCF4-290ENST00000638154 KIAA1109Q2LD37 5005 aa2.32□□□□□ -2.04
TCF4-290ENST00000638154 HRNRQ86YZ3 2850 aaPredicted RBP2.32□□□□□ -2.04
TCF4-290ENST00000638154 KRTAP1-3Q8IUG1 177 aa2.31□□□□□ -2.04
TCF4-290ENST00000638154 CSMD2Q7Z408 3487 aa2.31□□□□□ -2.04
TCF4-290ENST00000638154 TENM1Q9UKZ4 2725 aa2.3□□□□□ -2.04
TCF4-290ENST00000638154 KRTAP10-10P60014 251 aa2.3□□□□□ -2.04
TCF4-290ENST00000638154 KRTAP1-1Q07627 177 aa2.3□□□□□ -2.04
TCF4-290ENST00000638154 COL7A1Q02388 2944 aa2.29□□□□□ -2.04
TCF4-290ENST00000638154 RYR3Q15413 4870 aa2.29□□□□□ -2.04
TCF4-290ENST00000638154 TENM2Q9NT68 2774 aa2.29□□□□□ -2.04
TCF4-290ENST00000638154 MEGF8Q7Z7M0 2845 aa2.29□□□□□ -2.04
TCF4-290ENST00000638154 CRCT1Q9UGL9 99 aa2.28□□□□□ -2.04
TCF4-290ENST00000638154 TENM4Q6N022 2769 aa2.28□□□□□ -2.04
TCF4-290ENST00000638154 BSNQ9UPA5 3926 aa2.28□□□□□ -2.04
TCF4-290ENST00000638154 KMT2CQ8NEZ4 4911 aaKnown RBP2.28□□□□□ -2.04
TCF4-290ENST00000638154 SVEP1Q4LDE5 3571 aa2.27□□□□□ -2.05
TCF4-290ENST00000638154 CUBNO60494 3623 aa2.27□□□□□ -2.05
TCF4-290ENST00000638154 ZANQ9Y493 2812 aa2.27□□□□□ -2.05
TCF4-290ENST00000638154 KRTAP12-3P60328 96 aa2.26□□□□□ -2.05
TCF4-290ENST00000638154 LCE3AQ5TA76 89 aa2.26□□□□□ -2.05
TCF4-290ENST00000638154 KRTAP10-12P60413 245 aa2.23□□□□□ -2.05
TCF4-290ENST00000638154 MUC3AQ02505 3323 aa2.22□□□□□ -2.05
TCF4-290ENST00000638154 HMCN2Q8NDA2 5059 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms