RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 ZZEF1O43149 2961 aa8.64□□□□□ -1.03
UBE3A-227ENST00000638011 KRTAP1-3Q8IUG1 177 aa8.62□□□□□ -1.03
UBE3A-227ENST00000638011 A8MU10 97 aa8.61□□□□□ -1.03
UBE3A-227ENST00000638011 XIRP2A4UGR9 3374 aa8.58□□□□□ -1.04
UBE3A-227ENST00000638011 UNC80Q8N2C7 3258 aa8.58□□□□□ -1.04
UBE3A-227ENST00000638011 KRTAP1-1Q07627 177 aa8.58□□□□□ -1.04
UBE3A-227ENST00000638011 Q5VSD8 79 aa8.57□□□□□ -1.04
UBE3A-227ENST00000638011 DCHS2Q6V1P9 2916 aa8.54□□□□□ -1.04
UBE3A-227ENST00000638011 P0C880 135 aa8.5□□□□□ -1.05
UBE3A-227ENST00000638011 KRTAP1-5Q9BYS1 174 aa8.5□□□□□ -1.05
UBE3A-227ENST00000638011 DMXL1Q9Y485 3027 aa8.5□□□□□ -1.05
UBE3A-227ENST00000638011 ZANQ9Y493 2812 aa8.44□□□□□ -1.06
UBE3A-227ENST00000638011 BOD1L1Q8NFC6 3051 aa8.44□□□□□ -1.06
UBE3A-227ENST00000638011 HTTP42858 3142 aa8.42□□□□□ -1.06
UBE3A-227ENST00000638011 CELSR3Q9NYQ7 3312 aa8.41□□□□□ -1.06
UBE3A-227ENST00000638011 Q6ZRN7 208 aaPredicted RBP8.4□□□□□ -1.06
UBE3A-227ENST00000638011 ATMQ13315 3056 aa8.4□□□□□ -1.06
UBE3A-227ENST00000638011 KRTAP10-1P60331 282 aa8.39□□□□□ -1.07
UBE3A-227ENST00000638011 MKI67P46013 3256 aaKnown RBP8.38□□□□□ -1.07
UBE3A-227ENST00000638011 CELSR1Q9NYQ6 3014 aa8.37□□□□□ -1.07
UBE3A-227ENST00000638011 FBN2P35556 2912 aa8.34□□□□□ -1.07
UBE3A-227ENST00000638011 ADGRG4Q8IZF6 3080 aa8.33□□□□□ -1.08
UBE3A-227ENST00000638011 KRTAP13-1Q8IUC0 172 aa8.31□□□□□ -1.08
UBE3A-227ENST00000638011 USP34Q70CQ2 3546 aa8.31□□□□□ -1.08
UBE3A-227ENST00000638011 H0YAA0 97 aa8.29□□□□□ -1.08
UBE3A-227ENST00000638011 KRTAP10-2P60368 255 aa8.29□□□□□ -1.08
UBE3A-227ENST00000638011 VWFP04275 2813 aa8.27□□□□□ -1.09
UBE3A-227ENST00000638011 COL6A3P12111 3177 aa8.26□□□□□ -1.09
UBE3A-227ENST00000638011 TENM4Q6N022 2769 aa8.23□□□□□ -1.09
UBE3A-227ENST00000638011 MXRA5Q9NR99 2828 aa8.21□□□□□ -1.09
UBE3A-227ENST00000638011 TENM2Q9NT68 2774 aa8.2□□□□□ -1.1
UBE3A-227ENST00000638011 PKD1L1Q8TDX9 2849 aa8.2□□□□□ -1.1
UBE3A-227ENST00000638011 PRO2289Q9P1D8 64 aa8.17□□□□□ -1.1
UBE3A-227ENST00000638011 DNAH14Q0VDD8 3507 aa8.17□□□□□ -1.1
UBE3A-227ENST00000638011 KRTAP13-2Q52LG2 175 aa8.14□□□□□ -1.11
UBE3A-227ENST00000638011 LAMA3Q16787 3333 aa8.13□□□□□ -1.11
UBE3A-227ENST00000638011 COL7A1Q02388 2944 aa8.11□□□□□ -1.11
UBE3A-227ENST00000638011 CFAP47Q6ZTR5 3102 aa8.05□□□□□ -1.12
UBE3A-227ENST00000638011 KRTAP10-8P60410 259 aa8.05□□□□□ -1.12
UBE3A-227ENST00000638011 KRTAP7-1Q8IUC3 87 aa8.03□□□□□ -1.12
UBE3A-227ENST00000638011 HRNRQ86YZ3 2850 aaPredicted RBP8.02□□□□□ -1.12
UBE3A-227ENST00000638011 VCANP13611 3396 aa7.99□□□□□ -1.13
UBE3A-227ENST00000638011 BRCA2P51587 3418 aa7.94□□□□□ -1.14
UBE3A-227ENST00000638011 INE1O15225 51 aa7.91□□□□□ -1.14
UBE3A-227ENST00000638011 SPEGQ15772 3267 aa7.88□□□□□ -1.15
UBE3A-227ENST00000638011 TPRXLQ17RH7 258 aa7.85□□□□□ -1.15
UBE3A-227ENST00000638011 ZFHX3Q15911 3703 aa7.84□□□□□ -1.15
UBE3A-227ENST00000638011 XP32Q5T750 250 aa7.83□□□□□ -1.16
UBE3A-227ENST00000638011 MEGF8Q7Z7M0 2845 aa7.83□□□□□ -1.16
UBE3A-227ENST00000638011 KRTAP13-4Q3LI77 160 aa7.8□□□□□ -1.16
UBE3A-227ENST00000638011 CDH23Q9H251 3354 aa7.76□□□□□ -1.17
UBE3A-227ENST00000638011 MYO15AQ9UKN7 3530 aa7.67□□□□□ -1.18
UBE3A-227ENST00000638011 KRTAP1-4P0C5Y4 121 aa7.66□□□□□ -1.18
UBE3A-227ENST00000638011 SZT2Q5T011 3432 aa7.64□□□□□ -1.19
UBE3A-227ENST00000638011 OTOGQ6ZRI0 2925 aa7.63□□□□□ -1.19
UBE3A-227ENST00000638011 SPTBN5Q9NRC6 3674 aaKnown RBP7.62□□□□□ -1.19
UBE3A-227ENST00000638011 KRTAP13-3Q3SY46 172 aa7.62□□□□□ -1.19
UBE3A-227ENST00000638011 EYSQ5T1H1 3165 aa7.61□□□□□ -1.19
UBE3A-227ENST00000638011 ZFHX4Q86UP3 3567 aa7.61□□□□□ -1.19
UBE3A-227ENST00000638011 KRTAP12-2P59991 146 aa7.59□□□□□ -1.19
UBE3A-227ENST00000638011 KRTAP10-10P60014 251 aa7.58□□□□□ -1.2
UBE3A-227ENST00000638011 FBN3Q75N90 2809 aa7.57□□□□□ -1.2
UBE3A-227ENST00000638011 WDFY3Q8IZQ1 3526 aa7.51□□□□□ -1.21
UBE3A-227ENST00000638011 KRTAP12-1P59990 96 aa7.51□□□□□ -1.21
UBE3A-227ENST00000638011 FBN1P35555 2871 aaKnown RBP7.49□□□□□ -1.21
UBE3A-227ENST00000638011 NBPF19A0A087WUL8 3843 aa7.42□□□□□ -1.22
UBE3A-227ENST00000638011 LOC400499M0QZD8 3231 aa7.42□□□□□ -1.22
UBE3A-227ENST00000638011 ASPMQ8IZT6 3477 aa7.41□□□□□ -1.22
UBE3A-227ENST00000638011 KRTAP21-3Q3LHN1 58 aa7.41□□□□□ -1.22
UBE3A-227ENST00000638011 KRTAP15-1Q3LI76 137 aa7.37□□□□□ -1.23
UBE3A-227ENST00000638011 A0A1B0GVY2 172 aa7.37□□□□□ -1.23
UBE3A-227ENST00000638011 LAMA5O15230 3695 aa7.32□□□□□ -1.24
UBE3A-227ENST00000638011 SMG1Q96Q15 3661 aaKnown RBP7.29□□□□□ -1.24
UBE3A-227ENST00000638011 SPENQ96T58 3664 aaKnown RBP7.28□□□□□ -1.24
UBE3A-227ENST00000638011 RELNP78509 3460 aa7.27□□□□□ -1.24
UBE3A-227ENST00000638011 KRTAP23-1A1A580 65 aa7.22□□□□□ -1.25
UBE3A-227ENST00000638011 DMDP11532 3685 aa7.14□□□□□ -1.27
UBE3A-227ENST00000638011 DCHS1Q96JQ0 3298 aa7.12□□□□□ -1.27
UBE3A-227ENST00000638011 KRTAP10-6P60371 365 aaPredicted RBP7.05□□□□□ -1.28
UBE3A-227ENST00000638011 CSMD1Q96PZ7 3565 aa7.02□□□□□ -1.29
UBE3A-227ENST00000638011 AKAP9Q99996 3911 aa6.99□□□□□ -1.29
UBE3A-227ENST00000638011 KRTAP3-1Q9BYR8 98 aa6.97□□□□□ -1.29
UBE3A-227ENST00000638011 TRRAPQ9Y4A5 3859 aa6.97□□□□□ -1.29
UBE3A-227ENST00000638011 VPS13CQ709C8 3753 aa6.94□□□□□ -1.3
UBE3A-227ENST00000638011 KRTAP10-12P60413 245 aa6.91□□□□□ -1.3
UBE3A-227ENST00000638011 CUBNO60494 3623 aa6.82□□□□□ -1.32
UBE3A-227ENST00000638011 MUC3AQ02505 3323 aa6.76□□□□□ -1.33
UBE3A-227ENST00000638011 ALMS1Q8TCU4 4167 aa6.74□□□□□ -1.33
UBE3A-227ENST00000638011 KRTAP12-3P60328 96 aa6.74□□□□□ -1.33
UBE3A-227ENST00000638011 SVEP1Q4LDE5 3571 aa6.67□□□□□ -1.34
UBE3A-227ENST00000638011 KRTAP3-2Q9BYR7 98 aa6.67□□□□□ -1.34
UBE3A-227ENST00000638011 CSMD3Q7Z407 3707 aa6.67□□□□□ -1.34
UBE3A-227ENST00000638011 KRTAP3-3Q9BYR6 98 aa6.58□□□□□ -1.36
UBE3A-227ENST00000638011 BSNQ9UPA5 3926 aa6.48□□□□□ -1.37
UBE3A-227ENST00000638011 CSMD2Q7Z408 3487 aa6.38□□□□□ -1.39
UBE3A-227ENST00000638011 CRCT1Q9UGL9 99 aa6.38□□□□□ -1.39
UBE3A-227ENST00000638011 LCE3AQ5TA76 89 aa6.38□□□□□ -1.39
UBE3A-227ENST00000638011 LYSTQ99698 3801 aa6.36□□□□□ -1.39
UBE3A-227ENST00000638011 KRTAP10-5P60370 271 aa6.35□□□□□ -1.39
UBE3A-227ENST00000638011 KRTAP19-4Q3LI73 84 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms