RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 KRTAP29-1A8MX34 341 aaPredicted RBP3.63□□□□□ -1.83
CACNA1D-227ENST00000637844 NDUFC1O43677 76 aa3.63□□□□□ -1.83
CACNA1D-227ENST00000637844 NDUFS5O43920 106 aa3.63□□□□□ -1.83
CACNA1D-227ENST00000637844 MP68P56378 58 aa3.63□□□□□ -1.83
CACNA1D-227ENST00000637844 C5orf47Q569G3 176 aa3.63□□□□□ -1.83
CACNA1D-227ENST00000637844 C1orf195Q5TG92 126 aa3.63□□□□□ -1.83
CACNA1D-227ENST00000637844 TMEM254Q8TBM7 123 aa3.63□□□□□ -1.83
CACNA1D-227ENST00000637844 TP53AIP1Q9HCN2 124 aa3.63□□□□□ -1.83
CACNA1D-227ENST00000637844 DYNC1H1Q14204 4646 aaKnown RBP3.63□□□□□ -1.83
CACNA1D-227ENST00000637844 SRRM2Q9UQ35 2752 aaKnown RBP3.63□□□□□ -1.83
CACNA1D-227ENST00000637844 LINC00313P59037 77 aa3.62□□□□□ -1.83
CACNA1D-227ENST00000637844 MRPL34Q9BQ48 92 aaKnown RBP3.62□□□□□ -1.83
CACNA1D-227ENST00000637844 KLKP1Q107X0 134 aa3.61□□□□□ -1.83
CACNA1D-227ENST00000637844 APOBP04114 4563 aaKnown RBP3.6□□□□□ -1.83
CACNA1D-227ENST00000637844 H3BPC8 53 aa3.6□□□□□ -1.83
CACNA1D-227ENST00000637844 TMEM258P61165 79 aa3.6□□□□□ -1.83
CACNA1D-227ENST00000637844 Q8N1X5 172 aa3.6□□□□□ -1.83
CACNA1D-227ENST00000637844 SNURFQ9Y675 71 aa3.6□□□□□ -1.83
CACNA1D-227ENST00000637844 PKHD1P08F94 4074 aa3.6□□□□□ -1.83
CACNA1D-227ENST00000637844 TRAV22A0A0B4J277 110 aa3.59□□□□□ -1.83
CACNA1D-227ENST00000637844 H0Y9P7 68 aa3.59□□□□□ -1.83
CACNA1D-227ENST00000637844 KRTAP17-1Q9BYP8 105 aa3.59□□□□□ -1.83
CACNA1D-227ENST00000637844 A0A0U1RQV1 116 aa3.58□□□□□ -1.84
CACNA1D-227ENST00000637844 ATP5EP56381 51 aaPredicted RBP3.57□□□□□ -1.84
CACNA1D-227ENST00000637844 VPS13BQ7Z7G8 4022 aa3.56□□□□□ -1.84
CACNA1D-227ENST00000637844 KRTAP10-8P60410 259 aa3.56□□□□□ -1.84
CACNA1D-227ENST00000637844 NOTCH2NLQ7Z3S9 236 aa3.56□□□□□ -1.84
CACNA1D-227ENST00000637844 LINC00208Q96KT6 92 aa3.56□□□□□ -1.84
CACNA1D-227ENST00000637844 FAM236DA0A1B0GTK5 79 aa3.55□□□□□ -1.84
CACNA1D-227ENST00000637844 FAM236CP0DP71 79 aa3.55□□□□□ -1.84
CACNA1D-227ENST00000637844 C1orf64Q8NEQ6 169 aa3.55□□□□□ -1.84
CACNA1D-227ENST00000637844 H7BZZ5 65 aa3.54□□□□□ -1.84
CACNA1D-227ENST00000637844 CYSTM1Q9H1C7 97 aa3.54□□□□□ -1.84
CACNA1D-227ENST00000637844 LOC101927531A0A1B0GV80 90 aa3.53□□□□□ -1.84
CACNA1D-227ENST00000637844 OXTP01178 125 aa3.53□□□□□ -1.84
CACNA1D-227ENST00000637844 FP248Q71RG6 208 aaPredicted RBP3.53□□□□□ -1.84
CACNA1D-227ENST00000637844 Q8N9P0 234 aaPredicted RBP3.53□□□□□ -1.84
CACNA1D-227ENST00000637844 ZCCHC13Q8WW36 166 aaKnown RBP3.53□□□□□ -1.84
CACNA1D-227ENST00000637844 PKHD1L1Q86WI1 4243 aa3.53□□□□□ -1.84
CACNA1D-227ENST00000637844 RYR1P21817 5038 aa3.51□□□□□ -1.85
CACNA1D-227ENST00000637844 KRTAP16-1A8MUX0 517 aa3.51□□□□□ -1.85
CACNA1D-227ENST00000637844 RETNLBQ9BQ08 111 aa3.51□□□□□ -1.85
CACNA1D-227ENST00000637844 FAT1Q14517 4588 aa3.5□□□□□ -1.85
CACNA1D-227ENST00000637844 C9orf92A6NGG3 77 aa3.5□□□□□ -1.85
CACNA1D-227ENST00000637844 HSPG2P98160 4391 aa3.49□□□□□ -1.85
CACNA1D-227ENST00000637844 SPANXA2-OT1Q8N9U9 137 aa3.49□□□□□ -1.85
CACNA1D-227ENST00000637844 SERP1Q9Y6X1 66 aa3.49□□□□□ -1.85
CACNA1D-227ENST00000637844 RPS28P62857 69 aaKnown RBP3.48□□□□□ -1.85
CACNA1D-227ENST00000637844 PCLOQ9Y6V0 5065 aa3.47□□□□□ -1.85
CACNA1D-227ENST00000637844 IGLV7-46A0A075B6I9 117 aa3.47□□□□□ -1.85
CACNA1D-227ENST00000637844 A8MUU9 505 aa3.47□□□□□ -1.85
CACNA1D-227ENST00000637844 PCOTHQ58A44 107 aa3.47□□□□□ -1.85
CACNA1D-227ENST00000637844 Q5W150 140 aa3.47□□□□□ -1.85
CACNA1D-227ENST00000637844 HERC2O95714 4834 aa3.46□□□□□ -1.85
CACNA1D-227ENST00000637844 MT1HL1P0DM35 61 aa3.46□□□□□ -1.86
CACNA1D-227ENST00000637844 KRTAP13-3Q3SY46 172 aa3.46□□□□□ -1.86
CACNA1D-227ENST00000637844 C20orf166-AS1Q96NR2 134 aa3.46□□□□□ -1.86
CACNA1D-227ENST00000637844 CYP4F30PQ9H0H9 118 aa3.46□□□□□ -1.86
CACNA1D-227ENST00000637844 IGKV2D-30A0A075B6S6 120 aa3.45□□□□□ -1.86
CACNA1D-227ENST00000637844 J3QL48 77 aa3.45□□□□□ -1.86
CACNA1D-227ENST00000637844 IGKV2-30P06310 120 aa3.45□□□□□ -1.86
CACNA1D-227ENST00000637844 PRR4Q16378 134 aa3.45□□□□□ -1.86
CACNA1D-227ENST00000637844 C7orf65Q6ZTY9 151 aa3.44□□□□□ -1.86
CACNA1D-227ENST00000637844 Q75L30 129 aa3.44□□□□□ -1.86
CACNA1D-227ENST00000637844 ATP11AUNQ6ZP68 121 aa3.43□□□□□ -1.86
CACNA1D-227ENST00000637844 KIAA1109Q2LD37 5005 aa3.42□□□□□ -1.86
CACNA1D-227ENST00000637844 SMIM26A0A096LP01 95 aa3.41□□□□□ -1.86
CACNA1D-227ENST00000637844 HRES1P13985 223 aa3.41□□□□□ -1.86
CACNA1D-227ENST00000637844 KRTAP4-5Q9BYR2 181 aa3.41□□□□□ -1.86
CACNA1D-227ENST00000637844 ACYP2P14621 99 aa3.4□□□□□ -1.87
CACNA1D-227ENST00000637844 RPL37P61927 97 aaKnown RBP3.4□□□□□ -1.87
CACNA1D-227ENST00000637844 TNXBP22105 4242 aa3.39□□□□□ -1.87
CACNA1D-227ENST00000637844 FAT3Q8TDW7 4589 aa3.39□□□□□ -1.87
CACNA1D-227ENST00000637844 TPRXLQ17RH7 258 aa3.39□□□□□ -1.87
CACNA1D-227ENST00000637844 XP32Q5T750 250 aa3.39□□□□□ -1.87
CACNA1D-227ENST00000637844 FLG2Q5D862 2391 aaPredicted RBP3.39□□□□□ -1.87
CACNA1D-227ENST00000637844 COA5Q86WW8 74 aa3.38□□□□□ -1.87
CACNA1D-227ENST00000637844 ABCA13Q86UQ4 5058 aa3.37□□□□□ -1.87
CACNA1D-227ENST00000637844 A8MUN3 132 aa3.37□□□□□ -1.87
CACNA1D-227ENST00000637844 CHKB-CPT1BH3BT56 60 aa3.37□□□□□ -1.87
CACNA1D-227ENST00000637844 SPINK7P58062 85 aa3.37□□□□□ -1.87
CACNA1D-227ENST00000637844 DMAC1Q96GE9 116 aa3.37□□□□□ -1.87
CACNA1D-227ENST00000637844 LRP1Q07954 4544 aaKnown RBP3.37□□□□□ -1.87
CACNA1D-227ENST00000637844 V9GYY9 64 aa3.36□□□□□ -1.87
CACNA1D-227ENST00000637844 C4orf26Q17RF5 130 aa3.33□□□□□ -1.88
CACNA1D-227ENST00000637844 SEC61BP60468 96 aaKnown RBP3.32□□□□□ -1.88
CACNA1D-227ENST00000637844 SPTSSBQ8NFR3 76 aa3.32□□□□□ -1.88
CACNA1D-227ENST00000637844 MPLKIPQ8TAP9 179 aa3.32□□□□□ -1.88
CACNA1D-227ENST00000637844 Q1T7F1 81 aa3.31□□□□□ -1.88
CACNA1D-227ENST00000637844 COX6B2Q6YFQ2 88 aa3.3□□□□□ -1.88
CACNA1D-227ENST00000637844 MYCBP2O75592 4640 aa3.28□□□□□ -1.88
CACNA1D-227ENST00000637844 RBM12B-AS1Q9P1G2 102 aa3.28□□□□□ -1.88
CACNA1D-227ENST00000637844 HERC1Q15751 4861 aa3.27□□□□□ -1.89
CACNA1D-227ENST00000637844 DMBT1Q9UGM3 2413 aaPredicted RBP3.27□□□□□ -1.89
CACNA1D-227ENST00000637844 PRR15LQ9BU68 103 aa3.27□□□□□ -1.89
CACNA1D-227ENST00000637844 LINC01558Q9Y6Z2 57 aa3.25□□□□□ -1.89
CACNA1D-227ENST00000637844 PSPHP1O15172 72 aa3.24□□□□□ -1.89
CACNA1D-227ENST00000637844 SEC61GP60059 68 aa3.24□□□□□ -1.89
CACNA1D-227ENST00000637844 A0A1B0GU69 56 aa3.23□□□□□ -1.89
CACNA1D-227ENST00000637844 KRTAP3-1Q9BYR8 98 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms