RNA–Protein interactions for RNA: ENST00000637736.1

CACNA1A-246, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-246ENST00000637736 HTTP42858 3142 aa10.59□□□□□ -0.71
CACNA1A-246ENST00000637736 LAMA1P25391 3075 aa10.58□□□□□ -0.72
CACNA1A-246ENST00000637736 COL12A1Q99715 3063 aa10.56□□□□□ -0.72
CACNA1A-246ENST00000637736 Q6ZRN7 208 aaPredicted RBP10.54□□□□□ -0.72
CACNA1A-246ENST00000637736 COL6A3P12111 3177 aa10.53□□□□□ -0.72
CACNA1A-246ENST00000637736 HIVEP1P15822 2718 aa10.52□□□□□ -0.73
CACNA1A-246ENST00000637736 PP632Q6XCG6 107 aa10.52□□□□□ -0.73
CACNA1A-246ENST00000637736 P0C880 135 aa10.51□□□□□ -0.73
CACNA1A-246ENST00000637736 KRTAP11-1Q8IUC1 163 aa10.5□□□□□ -0.73
CACNA1A-246ENST00000637736 KRTAP13-2Q52LG2 175 aa10.48□□□□□ -0.73
CACNA1A-246ENST00000637736 TENM1Q9UKZ4 2725 aa10.46□□□□□ -0.74
CACNA1A-246ENST00000637736 A0A1B0GVY2 172 aa10.46□□□□□ -0.74
CACNA1A-246ENST00000637736 BOD1L1Q8NFC6 3051 aa10.43□□□□□ -0.74
CACNA1A-246ENST00000637736 KRTAP13-1Q8IUC0 172 aa10.42□□□□□ -0.74
CACNA1A-246ENST00000637736 CELSR2Q9HCU4 2923 aa10.41□□□□□ -0.74
CACNA1A-246ENST00000637736 TACC2O95359 2948 aa10.4□□□□□ -0.74
CACNA1A-246ENST00000637736 SPEGQ15772 3267 aa10.37□□□□□ -0.75
CACNA1A-246ENST00000637736 VCANP13611 3396 aa10.36□□□□□ -0.75
CACNA1A-246ENST00000637736 FLNCQ14315 2725 aa10.36□□□□□ -0.75
CACNA1A-246ENST00000637736 PRO2289Q9P1D8 64 aa10.35□□□□□ -0.75
CACNA1A-246ENST00000637736 CFAP47Q6ZTR5 3102 aa10.35□□□□□ -0.75
CACNA1A-246ENST00000637736 ZZEF1O43149 2961 aa10.33□□□□□ -0.76
CACNA1A-246ENST00000637736 NF1P21359 2839 aa10.3□□□□□ -0.76
CACNA1A-246ENST00000637736 KRTAP7-1Q8IUC3 87 aa10.29□□□□□ -0.76
CACNA1A-246ENST00000637736 KRTAP10-10P60014 251 aa10.26□□□□□ -0.77
CACNA1A-246ENST00000637736 NBEAQ8NFP9 2946 aa10.26□□□□□ -0.77
CACNA1A-246ENST00000637736 KRTAP21-3Q3LHN1 58 aa10.26□□□□□ -0.77
CACNA1A-246ENST00000637736 ADGRG4Q8IZF6 3080 aa10.25□□□□□ -0.77
CACNA1A-246ENST00000637736 TNRC18O15417 2968 aaPredicted RBP10.2□□□□□ -0.78
CACNA1A-246ENST00000637736 ATMQ13315 3056 aa10.2□□□□□ -0.78
CACNA1A-246ENST00000637736 NIPBLQ6KC79 2804 aaeCLIP10.17□□□□□ -0.78
CACNA1A-246ENST00000637736 TENM3Q9P273 2699 aa10.17□□□□□ -0.78
CACNA1A-246ENST00000637736 DCHS2Q6V1P9 2916 aa10.15□□□□□ -0.78
CACNA1A-246ENST00000637736 SZT2Q5T011 3432 aa10.14□□□□□ -0.79
CACNA1A-246ENST00000637736 XP32Q5T750 250 aa10.12□□□□□ -0.79
CACNA1A-246ENST00000637736 CELSR1Q9NYQ6 3014 aa10.1□□□□□ -0.79
CACNA1A-246ENST00000637736 DMXL1Q9Y485 3027 aa10.1□□□□□ -0.79
CACNA1A-246ENST00000637736 TPRXLQ17RH7 258 aa10.07□□□□□ -0.8
CACNA1A-246ENST00000637736 SPTBN5Q9NRC6 3674 aaKnown RBP10.06□□□□□ -0.8
CACNA1A-246ENST00000637736 TGP01266 2768 aa10.05□□□□□ -0.8
CACNA1A-246ENST00000637736 TENM4Q6N022 2769 aa10.03□□□□□ -0.8
CACNA1A-246ENST00000637736 H0YAA0 97 aa10□□□□□ -0.81
CACNA1A-246ENST00000637736 NBPF19A0A087WUL8 3843 aa9.93□□□□□ -0.82
CACNA1A-246ENST00000637736 EYSQ5T1H1 3165 aa9.92□□□□□ -0.82
CACNA1A-246ENST00000637736 ZANQ9Y493 2812 aa9.91□□□□□ -0.82
CACNA1A-246ENST00000637736 FBN2P35556 2912 aa9.91□□□□□ -0.82
CACNA1A-246ENST00000637736 KRTAP1-4P0C5Y4 121 aa9.87□□□□□ -0.83
CACNA1A-246ENST00000637736 PDZD2O15018 2839 aa9.85□□□□□ -0.83
CACNA1A-246ENST00000637736 WDFY3Q8IZQ1 3526 aa9.8□□□□□ -0.84
CACNA1A-246ENST00000637736 HRNRQ86YZ3 2850 aaPredicted RBP9.74□□□□□ -0.85
CACNA1A-246ENST00000637736 VWFP04275 2813 aa9.72□□□□□ -0.85
CACNA1A-246ENST00000637736 PKD1L1Q8TDX9 2849 aa9.72□□□□□ -0.85
CACNA1A-246ENST00000637736 KRTAP13-3Q3SY46 172 aa9.7□□□□□ -0.86
CACNA1A-246ENST00000637736 ASPMQ8IZT6 3477 aa9.66□□□□□ -0.86
CACNA1A-246ENST00000637736 ZFHX4Q86UP3 3567 aa9.65□□□□□ -0.87
CACNA1A-246ENST00000637736 MXRA5Q9NR99 2828 aa9.64□□□□□ -0.87
CACNA1A-246ENST00000637736 KRTAP12-2P59991 146 aa9.62□□□□□ -0.87
CACNA1A-246ENST00000637736 LOC400499M0QZD8 3231 aa9.62□□□□□ -0.87
CACNA1A-246ENST00000637736 MYO15AQ9UKN7 3530 aa9.59□□□□□ -0.87
CACNA1A-246ENST00000637736 LAMA5O15230 3695 aa9.55□□□□□ -0.88
CACNA1A-246ENST00000637736 TENM2Q9NT68 2774 aa9.54□□□□□ -0.88
CACNA1A-246ENST00000637736 KRTAP15-1Q3LI76 137 aa9.43□□□□□ -0.9
CACNA1A-246ENST00000637736 KRTAP13-4Q3LI77 160 aa9.43□□□□□ -0.9
CACNA1A-246ENST00000637736 DCHS1Q96JQ0 3298 aa9.38□□□□□ -0.91
CACNA1A-246ENST00000637736 ZFHX3Q15911 3703 aa9.36□□□□□ -0.91
CACNA1A-246ENST00000637736 COL7A1Q02388 2944 aa9.31□□□□□ -0.92
CACNA1A-246ENST00000637736 RELNP78509 3460 aa9.25□□□□□ -0.93
CACNA1A-246ENST00000637736 SPENQ96T58 3664 aaKnown RBP9.25□□□□□ -0.93
CACNA1A-246ENST00000637736 CSMD1Q96PZ7 3565 aa9.25□□□□□ -0.93
CACNA1A-246ENST00000637736 SRRM2Q9UQ35 2752 aaKnown RBP9.22□□□□□ -0.93
CACNA1A-246ENST00000637736 SMG1Q96Q15 3661 aaKnown RBP9.17□□□□□ -0.94
CACNA1A-246ENST00000637736 KRTAP12-1P59990 96 aa9.17□□□□□ -0.94
CACNA1A-246ENST00000637736 CRCT1Q9UGL9 99 aa9.16□□□□□ -0.94
CACNA1A-246ENST00000637736 MEGF8Q7Z7M0 2845 aa9.13□□□□□ -0.95
CACNA1A-246ENST00000637736 DMDP11532 3685 aa9.08□□□□□ -0.96
CACNA1A-246ENST00000637736 INE1O15225 51 aa8.94□□□□□ -0.98
CACNA1A-246ENST00000637736 FBN3Q75N90 2809 aa8.93□□□□□ -0.98
CACNA1A-246ENST00000637736 FBN1P35555 2871 aaKnown RBP8.9□□□□□ -0.99
CACNA1A-246ENST00000637736 TRRAPQ9Y4A5 3859 aa8.86□□□□□ -0.99
CACNA1A-246ENST00000637736 VPS13CQ709C8 3753 aa8.82□□□□□ -1
CACNA1A-246ENST00000637736 KRTAP10-12P60413 245 aa8.75□□□□□ -1.01
CACNA1A-246ENST00000637736 KRTAP3-1Q9BYR8 98 aa8.73□□□□□ -1.01
CACNA1A-246ENST00000637736 SVEP1Q4LDE5 3571 aa8.73□□□□□ -1.01
CACNA1A-246ENST00000637736 CUBNO60494 3623 aa8.69□□□□□ -1.02
CACNA1A-246ENST00000637736 KRTAP10-6P60371 365 aaPredicted RBP8.61□□□□□ -1.03
CACNA1A-246ENST00000637736 MUC3AQ02505 3323 aa8.57□□□□□ -1.04
CACNA1A-246ENST00000637736 OTOGQ6ZRI0 2925 aa8.57□□□□□ -1.04
CACNA1A-246ENST00000637736 BSNQ9UPA5 3926 aa8.52□□□□□ -1.05
CACNA1A-246ENST00000637736 AKAP9Q99996 3911 aa8.51□□□□□ -1.05
CACNA1A-246ENST00000637736 CSMD3Q7Z407 3707 aa8.46□□□□□ -1.06
CACNA1A-246ENST00000637736 KRTAP12-3P60328 96 aa8.42□□□□□ -1.06
CACNA1A-246ENST00000637736 KRTAP10-5P60370 271 aa8.4□□□□□ -1.06
CACNA1A-246ENST00000637736 KRTAP23-1A1A580 65 aa8.36□□□□□ -1.07
CACNA1A-246ENST00000637736 CSMD2Q7Z408 3487 aa8.34□□□□□ -1.07
CACNA1A-246ENST00000637736 LCE3AQ5TA76 89 aa8.24□□□□□ -1.09
CACNA1A-246ENST00000637736 MT1HL1P0DM35 61 aa8.23□□□□□ -1.09
CACNA1A-246ENST00000637736 ALMS1Q8TCU4 4167 aa8.22□□□□□ -1.09
CACNA1A-246ENST00000637736 KRTAP3-3Q9BYR6 98 aa8.22□□□□□ -1.09
CACNA1A-246ENST00000637736 KRTAP3-2Q9BYR7 98 aa8.19□□□□□ -1.1
CACNA1A-246ENST00000637736 KRTAP8-1Q8IUC2 63 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms