RNA–Protein interactions for RNA: ENST00000637533.1

MECP2-222, Transcript of methyl-CpG binding protein 2, human

TSL 5

Gene MECP2, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MECP2-222	ENST00000637533	MTOR	P42345	2549 aa		0.29	□□□□□ -2.36
MECP2-222	ENST00000637533	USP24	Q9UPU5	2620 aa		0.29	□□□□□ -2.36
MECP2-222	ENST00000637533	CEP290	O15078	2479 aa		0.28	□□□□□ -2.36
MECP2-222	ENST00000637533	MAP1B	P46821	2468 aa	Known RBP	0.28	□□□□□ -2.36
MECP2-222	ENST00000637533	NAV2	Q8IVL1	2488 aa		0.28	□□□□□ -2.36
MECP2-222	ENST00000637533	HUWE1	Q7Z6Z7	4374 aa	Known RBP	0.28	□□□□□ -2.36
MECP2-222	ENST00000637533		A0A0C4DFX4	3053 aa		0.28	□□□□□ -2.36
MECP2-222	ENST00000637533	FLNA	P21333	2647 aa	Known RBP	0.28	□□□□□ -2.36
MECP2-222	ENST00000637533	FSIP2	Q5CZC0	6907 aa		0.28	□□□□□ -2.36
MECP2-222	ENST00000637533	CSMD3	Q7Z407	3707 aa		0.28	□□□□□ -2.36
MECP2-222	ENST00000637533	PRM1	P04553	51 aa		0.28	□□□□□ -2.36
MECP2-222	ENST00000637533	KRTAP21-1	Q3LI58	79 aa		0.28	□□□□□ -2.36
MECP2-222	ENST00000637533	PRKDC	P78527	4128 aa	Known RBP	0.28	□□□□□ -2.36
MECP2-222	ENST00000637533	FLNB	O75369	2602 aa	Known RBP	0.28	□□□□□ -2.37
MECP2-222	ENST00000637533	ANKRD11	Q6UB99	2663 aa	Predicted RBP	0.28	□□□□□ -2.37
MECP2-222	ENST00000637533	ALMS1	Q8TCU4	4167 aa		0.27	□□□□□ -2.37
MECP2-222	ENST00000637533	NF1	P21359	2839 aa		0.27	□□□□□ -2.37
MECP2-222	ENST00000637533	KRTAP21-2	Q3LI59	83 aa		0.27	□□□□□ -2.37
MECP2-222	ENST00000637533	ACAN	P16112	2415 aa		0.27	□□□□□ -2.37
MECP2-222	ENST00000637533	IGF2R	P11717	2491 aa		0.27	□□□□□ -2.37
MECP2-222	ENST00000637533	KMT2A	Q03164	3969 aa		0.26	□□□□□ -2.37
MECP2-222	ENST00000637533	NSD1	Q96L73	2696 aa	Predicted RBP	0.26	□□□□□ -2.37
MECP2-222	ENST00000637533	RPL39	P62891	51 aa	Known RBP	0.26	□□□□□ -2.37
MECP2-222	ENST00000637533	BSN	Q9UPA5	3926 aa		0.26	□□□□□ -2.37
MECP2-222	ENST00000637533	UTP20	O75691	2785 aa	Known RBP	0.25	□□□□□ -2.37
MECP2-222	ENST00000637533	TG	P01266	2768 aa		0.25	□□□□□ -2.37
MECP2-222	ENST00000637533	FLNC	Q14315	2725 aa		0.25	□□□□□ -2.37
MECP2-222	ENST00000637533	TENM3	Q9P273	2699 aa		0.25	□□□□□ -2.37
MECP2-222	ENST00000637533	CACNA1A	O00555	2505 aa		0.25	□□□□□ -2.37
MECP2-222	ENST00000637533	MUC5AC	P98088	5654 aa		0.25	□□□□□ -2.37
MECP2-222	ENST00000637533		K7EIM0	57 aa		0.25	□□□□□ -2.37
MECP2-222	ENST00000637533	PRCD	Q00LT1	54 aa		0.25	□□□□□ -2.37
MECP2-222	ENST00000637533	DEFB136	Q30KP8	78 aa		0.25	□□□□□ -2.37
MECP2-222	ENST00000637533	SRRM2	Q9UQ35	2752 aa	Known RBP	0.25	□□□□□ -2.37
MECP2-222	ENST00000637533	DMBT1	Q9UGM3	2413 aa	Predicted RBP	0.24	□□□□□ -2.37
MECP2-222	ENST00000637533	TNXB	P22105	4242 aa		0.24	□□□□□ -2.37
MECP2-222	ENST00000637533	ACACA	Q13085	2346 aa		0.24	□□□□□ -2.37
MECP2-222	ENST00000637533	SPRR2E	P22531	72 aa		0.24	□□□□□ -2.37
MECP2-222	ENST00000637533	KRTAP8-1	Q8IUC2	63 aa		0.24	□□□□□ -2.37
MECP2-222	ENST00000637533	ARHGAP5-AS1	Q96IT6	56 aa		0.24	□□□□□ -2.37
MECP2-222	ENST00000637533	KRTAP4-1	Q9BYQ7	146 aa		0.24	□□□□□ -2.37
MECP2-222	ENST00000637533	NBEA	Q8NFP9	2946 aa		0.24	□□□□□ -2.37
MECP2-222	ENST00000637533	UBR5	O95071	2799 aa	Predicted RBP	0.24	□□□□□ -2.37
MECP2-222	ENST00000637533	SPTBN4	Q9H254	2564 aa		0.24	□□□□□ -2.37
MECP2-222	ENST00000637533	EPG5	Q9HCE0	2579 aa		0.24	□□□□□ -2.37
MECP2-222	ENST00000637533	MAST4	O15021	2626 aa		0.23	□□□□□ -2.37
MECP2-222	ENST00000637533	LPA	P08519	4548 aa		0.23	□□□□□ -2.37
MECP2-222	ENST00000637533	CD52	P31358	61 aa		0.23	□□□□□ -2.37
MECP2-222	ENST00000637533	RPL39L	Q96EH5	51 aa	Known RBP	0.23	□□□□□ -2.37
MECP2-222	ENST00000637533		Q9Y3F1	56 aa		0.23	□□□□□ -2.37
MECP2-222	ENST00000637533	HIVEP1	P15822	2718 aa		0.23	□□□□□ -2.37
MECP2-222	ENST00000637533	SETD2	Q9BYW2	2564 aa	Predicted RBP	0.23	□□□□□ -2.37
MECP2-222	ENST00000637533	DCHS2	Q6V1P9	2916 aa		0.23	□□□□□ -2.37
MECP2-222	ENST00000637533	MUC16	Q8WXI7	14507 aa		0.22	□□□□□ -2.37
MECP2-222	ENST00000637533	ITPR1	Q14643	2758 aa		0.22	□□□□□ -2.37
MECP2-222	ENST00000637533	NBAS	A2RRP1	2371 aa		0.22	□□□□□ -2.37
MECP2-222	ENST00000637533	FAM186A	A6NE01	2351 aa		0.22	□□□□□ -2.37
MECP2-222	ENST00000637533	DEFB1	P60022	68 aa		0.22	□□□□□ -2.37
MECP2-222	ENST00000637533	RPS29	P62273	56 aa	Known RBP	0.22	□□□□□ -2.37
MECP2-222	ENST00000637533	KRTAP5-10	Q6L8G5	202 aa		0.22	□□□□□ -2.37
MECP2-222	ENST00000637533	LEAP2	Q969E1	77 aa		0.22	□□□□□ -2.37
MECP2-222	ENST00000637533	SPRR2F	Q96RM1	72 aa		0.22	□□□□□ -2.37
MECP2-222	ENST00000637533	TNRC18	O15417	2968 aa	Predicted RBP	0.22	□□□□□ -2.37
MECP2-222	ENST00000637533	TEP1	Q99973	2627 aa	Known RBP	0.22	□□□□□ -2.37
MECP2-222	ENST00000637533	MYCBP2	O75592	4640 aa		0.22	□□□□□ -2.37
MECP2-222	ENST00000637533	STAB2	Q8WWQ8	2551 aa		0.21	□□□□□ -2.38
MECP2-222	ENST00000637533	SPG11	Q96JI7	2443 aa		0.21	□□□□□ -2.38
MECP2-222	ENST00000637533	HRNR	Q86YZ3	2850 aa	Predicted RBP	0.21	□□□□□ -2.38
MECP2-222	ENST00000637533	LRP1	Q07954	4544 aa	Known RBP	0.2	□□□□□ -2.38
MECP2-222	ENST00000637533	LRRK2	Q5S007	2527 aa		0.2	□□□□□ -2.38
MECP2-222	ENST00000637533	PDZD2	O15018	2839 aa		0.2	□□□□□ -2.38
MECP2-222	ENST00000637533	MXRA5	Q9NR99	2828 aa		0.2	□□□□□ -2.38
MECP2-222	ENST00000637533	PKD1	P98161	4303 aa		0.2	□□□□□ -2.38
MECP2-222	ENST00000637533	RIF1	Q5UIP0	2472 aa	Known RBP	0.2	□□□□□ -2.38
MECP2-222	ENST00000637533	NBEAL1	Q6ZS30	2694 aa		0.2	□□□□□ -2.38
MECP2-222	ENST00000637533	GCN1	Q92616	2671 aa	Known RBP	0.2	□□□□□ -2.38
MECP2-222	ENST00000637533	SON	P18583	2426 aa	Known RBP	0.19	□□□□□ -2.38
MECP2-222	ENST00000637533	NBEAL2	Q6ZNJ1	2754 aa		0.19	□□□□□ -2.38
MECP2-222	ENST00000637533	MGAM2	Q2M2H8	2515 aa		0.19	□□□□□ -2.38
MECP2-222	ENST00000637533	COL7A1	Q02388	2944 aa		0.19	□□□□□ -2.38
MECP2-222	ENST00000637533	HTT	P42858	3142 aa		0.19	□□□□□ -2.38
MECP2-222	ENST00000637533	FAT2	Q9NYQ8	4349 aa		0.19	□□□□□ -2.38
MECP2-222	ENST00000637533	MT1H	P80294	61 aa		0.19	□□□□□ -2.38
MECP2-222	ENST00000637533	DEFB124	Q8NES8	71 aa		0.19	□□□□□ -2.38
MECP2-222	ENST00000637533	TMEM167A	Q8TBQ9	72 aa		0.19	□□□□□ -2.38
MECP2-222	ENST00000637533	ZAN	Q9Y493	2812 aa		0.19	□□□□□ -2.38
MECP2-222	ENST00000637533	KMT2D	O14686	5537 aa		0.19	□□□□□ -2.38
MECP2-222	ENST00000637533	SYNE1	Q8NF91	8797 aa	Known RBP	0.19	□□□□□ -2.38
MECP2-222	ENST00000637533	COL6A3	P12111	3177 aa		0.19	□□□□□ -2.38
MECP2-222	ENST00000637533	ZZEF1	O43149	2961 aa		0.19	□□□□□ -2.38
MECP2-222	ENST00000637533	TACC2	O95359	2948 aa		0.19	□□□□□ -2.38
MECP2-222	ENST00000637533	COL6A5	A8TX70	2615 aa		0.18	□□□□□ -2.38
MECP2-222	ENST00000637533	ANKHD1	Q8IWZ3	2542 aa	Known RBP	0.18	□□□□□ -2.38
MECP2-222	ENST00000637533	PKHD1	P08F94	4074 aa		0.18	□□□□□ -2.38
MECP2-222	ENST00000637533	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	0.17	□□□□□ -2.38
MECP2-222	ENST00000637533	DEFB133	Q30KQ1	61 aa		0.17	□□□□□ -2.38
MECP2-222	ENST00000637533	DNAH3	Q8TD57	4116 aa		0.17	□□□□□ -2.38
MECP2-222	ENST00000637533	ACACB	O00763	2458 aa		0.16	□□□□□ -2.38
MECP2-222	ENST00000637533	DMXL1	Q9Y485	3027 aa		0.16	□□□□□ -2.38
MECP2-222	ENST00000637533	TENM2	Q9NT68	2774 aa		0.16	□□□□□ -2.38

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms