RNA–Protein interactions for RNA: ENST00000637336.1

CFAP54-209, Transcript of cilia and flagella associated protein 54, humanhuman

APPRIS ALT2 TSL 5

Gene CFAP54, Length 6,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-209ENST00000637336 DMDP11532 3685 aa2.84□□□□□ -1.95
CFAP54-209ENST00000637336 MYO15AQ9UKN7 3530 aa2.83□□□□□ -1.96
CFAP54-209ENST00000637336 DNAH12Q6ZR08 3092 aa2.82□□□□□ -1.96
CFAP54-209ENST00000637336 DNAH14Q0VDD8 3507 aa2.81□□□□□ -1.96
CFAP54-209ENST00000637336 UNC80Q8N2C7 3258 aa2.81□□□□□ -1.96
CFAP54-209ENST00000637336 HUWE1Q7Z6Z7 4374 aaKnown RBP2.81□□□□□ -1.96
CFAP54-209ENST00000637336 SPENQ96T58 3664 aaKnown RBP2.8□□□□□ -1.96
CFAP54-209ENST00000637336 BRCA2P51587 3418 aa2.8□□□□□ -1.96
CFAP54-209ENST00000637336 KRTAP12-3P60328 96 aa2.8□□□□□ -1.96
CFAP54-209ENST00000637336 NIPBLQ6KC79 2804 aaeCLIP2.77□□□□□ -1.97
CFAP54-209ENST00000637336 KRTAP10-4P60372 401 aaPredicted RBP2.77□□□□□ -1.97
CFAP54-209ENST00000637336 VPS13AQ96RL7 3174 aa2.77□□□□□ -1.97
CFAP54-209ENST00000637336 KRTAP3-1Q9BYR8 98 aa2.76□□□□□ -1.97
CFAP54-209ENST00000637336 CFAP54Q96N23 3096 aa2.76□□□□□ -1.97
CFAP54-209ENST00000637336 AKAP13Q12802 2813 aa2.75□□□□□ -1.97
CFAP54-209ENST00000637336 SPEGQ15772 3267 aa2.74□□□□□ -1.97
CFAP54-209ENST00000637336 KRTAP10-6P60371 365 aaPredicted RBP2.74□□□□□ -1.97
CFAP54-209ENST00000637336 LAMA1P25391 3075 aa2.73□□□□□ -1.97
CFAP54-209ENST00000637336 NBEAQ8NFP9 2946 aa2.73□□□□□ -1.97
CFAP54-209ENST00000637336 RANBP2P49792 3224 aaKnown RBP2.73□□□□□ -1.97
CFAP54-209ENST00000637336 ALMS1Q8TCU4 4167 aa2.71□□□□□ -1.97
CFAP54-209ENST00000637336 ITPR1Q14643 2758 aa2.71□□□□□ -1.98
CFAP54-209ENST00000637336 KRTAP10-7P60409 375 aaPredicted RBP2.71□□□□□ -1.98
CFAP54-209ENST00000637336 MYCBP2O75592 4640 aa2.7□□□□□ -1.98
CFAP54-209ENST00000637336 ZFHX3Q15911 3703 aa2.7□□□□□ -1.98
CFAP54-209ENST00000637336 MKI67P46013 3256 aaKnown RBP2.7□□□□□ -1.98
CFAP54-209ENST00000637336 TRIOO75962 3097 aa2.69□□□□□ -1.98
CFAP54-209ENST00000637336 ZFHX4Q86UP3 3567 aa2.69□□□□□ -1.98
CFAP54-209ENST00000637336 SMG1Q96Q15 3661 aaKnown RBP2.68□□□□□ -1.98
CFAP54-209ENST00000637336 REV3LO60673 3130 aa2.68□□□□□ -1.98
CFAP54-209ENST00000637336 CRCT1Q9UGL9 99 aa2.67□□□□□ -1.98
CFAP54-209ENST00000637336 TENM2Q9NT68 2774 aa2.66□□□□□ -1.98
CFAP54-209ENST00000637336 FRYQ5TBA9 3013 aa2.66□□□□□ -1.98
CFAP54-209ENST00000637336 COL6A3P12111 3177 aa2.66□□□□□ -1.98
CFAP54-209ENST00000637336 APCP25054 2843 aa2.66□□□□□ -1.98
CFAP54-209ENST00000637336 TENM3Q9P273 2699 aa2.66□□□□□ -1.98
CFAP54-209ENST00000637336 FREM2Q5SZK8 3169 aa2.64□□□□□ -1.99
CFAP54-209ENST00000637336 PRRC2CQ9Y520 2896 aaKnown RBP2.64□□□□□ -1.99
CFAP54-209ENST00000637336 FLNCQ14315 2725 aa2.64□□□□□ -1.99
CFAP54-209ENST00000637336 CFAP47Q6ZTR5 3102 aa2.63□□□□□ -1.99
CFAP54-209ENST00000637336 FRYLO94915 3013 aa2.63□□□□□ -1.99
CFAP54-209ENST00000637336 KRTAP4-5Q9BYR2 181 aa2.63□□□□□ -1.99
CFAP54-209ENST00000637336 ASPMQ8IZT6 3477 aa2.63□□□□□ -1.99
CFAP54-209ENST00000637336 LORP23490 312 aaPredicted RBP2.63□□□□□ -1.99
CFAP54-209ENST00000637336 KRTAP3-2Q9BYR7 98 aa2.61□□□□□ -1.99
CFAP54-209ENST00000637336 NBEAL2Q6ZNJ1 2754 aa2.61□□□□□ -1.99
CFAP54-209ENST00000637336 PRUNE2Q8WUY3 3088 aa2.61□□□□□ -1.99
CFAP54-209ENST00000637336 TENM1Q9UKZ4 2725 aa2.61□□□□□ -1.99
CFAP54-209ENST00000637336 MT1HP80294 61 aa2.61□□□□□ -1.99
CFAP54-209ENST00000637336 SPRR2GQ9BYE4 73 aa2.6□□□□□ -1.99
CFAP54-209ENST00000637336 RELNP78509 3460 aa2.6□□□□□ -1.99
CFAP54-209ENST00000637336 LCE3AQ5TA76 89 aa2.6□□□□□ -1.99
CFAP54-209ENST00000637336 KRTAP3-3Q9BYR6 98 aa2.6□□□□□ -1.99
CFAP54-209ENST00000637336 LOC400499M0QZD8 3231 aa2.6□□□□□ -1.99
CFAP54-209ENST00000637336 FBN3Q75N90 2809 aa2.59□□□□□ -1.99
CFAP54-209ENST00000637336 EYSQ5T1H1 3165 aa2.59□□□□□ -1.99
CFAP54-209ENST00000637336 CELSR3Q9NYQ7 3312 aa2.59□□□□□ -2
CFAP54-209ENST00000637336 C5orf42Q9H799 3197 aa2.58□□□□□ -2
CFAP54-209ENST00000637336 UTP20O75691 2785 aaKnown RBP2.58□□□□□ -2
CFAP54-209ENST00000637336 SPRR2FQ96RM1 72 aa2.58□□□□□ -2
CFAP54-209ENST00000637336 DCHS1Q96JQ0 3298 aa2.57□□□□□ -2
CFAP54-209ENST00000637336 HTTP42858 3142 aa2.57□□□□□ -2
CFAP54-209ENST00000637336 TRANK1O15050 2925 aa2.56□□□□□ -2
CFAP54-209ENST00000637336 CHD9Q3L8U1 2897 aa2.56□□□□□ -2
CFAP54-209ENST00000637336 HERC1Q15751 4861 aa2.56□□□□□ -2
CFAP54-209ENST00000637336 WDFY4Q6ZS81 3184 aa2.55□□□□□ -2
CFAP54-209ENST00000637336 MT2AP02795 61 aa2.55□□□□□ -2
CFAP54-209ENST00000637336 ATMQ13315 3056 aa2.54□□□□□ -2
CFAP54-209ENST00000637336 MGAQ8IWI9 3026 aa2.54□□□□□ -2
CFAP54-209ENST00000637336 KRTAP10-5P60370 271 aa2.54□□□□□ -2
CFAP54-209ENST00000637336 SPRR2EP22531 72 aa2.53□□□□□ -2
CFAP54-209ENST00000637336 SPRR2BP35325 72 aa2.53□□□□□ -2
CFAP54-209ENST00000637336 SPRR2AP35326 72 aa2.53□□□□□ -2
CFAP54-209ENST00000637336 KRTAP12-4P60329 112 aa2.52□□□□□ -2.01
CFAP54-209ENST00000637336 DSPP15924 2871 aaKnown RBP2.51□□□□□ -2.01
CFAP54-209ENST00000637336 TACC2O95359 2948 aa2.51□□□□□ -2.01
CFAP54-209ENST00000637336 ASH1LQ9NR48 2969 aaKnown RBP2.51□□□□□ -2.01
CFAP54-209ENST00000637336 DMXL2Q8TDJ6 3036 aa2.51□□□□□ -2.01
CFAP54-209ENST00000637336 NBPF19A0A087WUL8 3843 aa2.5□□□□□ -2.01
CFAP54-209ENST00000637336 SPRR2DP22532 72 aa2.5□□□□□ -2.01
CFAP54-209ENST00000637336 BOD1L1Q8NFC6 3051 aa2.49□□□□□ -2.01
CFAP54-209ENST00000637336 MUC3AQ02505 3323 aa2.49□□□□□ -2.01
CFAP54-209ENST00000637336 DNAH2Q9P225 4427 aa2.48□□□□□ -2.01
CFAP54-209ENST00000637336 TGP01266 2768 aa2.48□□□□□ -2.01
CFAP54-209ENST00000637336 AKAP9Q99996 3911 aa2.48□□□□□ -2.01
CFAP54-209ENST00000637336 TNRC18O15417 2968 aaPredicted RBP2.47□□□□□ -2.01
CFAP54-209ENST00000637336 LCE2BO14633 110 aa2.47□□□□□ -2.01
CFAP54-209ENST00000637336 ADGRG4Q8IZF6 3080 aa2.47□□□□□ -2.01
CFAP54-209ENST00000637336 VPS13CQ709C8 3753 aa2.47□□□□□ -2.01
CFAP54-209ENST00000637336 BSNQ9UPA5 3926 aa2.46□□□□□ -2.02
CFAP54-209ENST00000637336 LRBAP50851 2863 aa2.45□□□□□ -2.02
CFAP54-209ENST00000637336 KRTAP19-8Q3LI54 63 aa2.45□□□□□ -2.02
CFAP54-209ENST00000637336 DNAH1Q9P2D7 4330 aa2.45□□□□□ -2.02
CFAP54-209ENST00000637336 CHD7Q9P2D1 2997 aa2.44□□□□□ -2.02
CFAP54-209ENST00000637336 CUBNO60494 3623 aa2.44□□□□□ -2.02
CFAP54-209ENST00000637336 MXRA5Q9NR99 2828 aa2.44□□□□□ -2.02
CFAP54-209ENST00000637336 LAMA5O15230 3695 aa2.43□□□□□ -2.02
CFAP54-209ENST00000637336 LCE2CQ5TA81 110 aa2.43□□□□□ -2.02
CFAP54-209ENST00000637336 LRP1BQ9NZR2 4599 aa2.42□□□□□ -2.02
CFAP54-209ENST00000637336 CSMD1Q96PZ7 3565 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms