RNA–Protein interactions for RNA: ENST00000637336.1

CFAP54-209, Transcript of cilia and flagella associated protein 54, humanhuman

APPRIS ALT2 TSL 5

Gene CFAP54, Length 6,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-209ENST00000637336 DCAF8L2P0C7V8 631 aa10.85□□□□□ -0.67
CFAP54-209ENST00000637336 FAM9AQ8IZU1 332 aaPredicted RBP10.8□□□□□ -0.68
CFAP54-209ENST00000637336 NISCHQ9Y2I1 1504 aa10.61□□□□□ -0.71
CFAP54-209ENST00000637336 APLP2Q06481 763 aa10.16□□□□□ -0.78
CFAP54-209ENST00000637336 PELP1Q8IZL8 1130 aaKnown RBP10.06□□□□□ -0.8
CFAP54-209ENST00000637336 SUPT5HO00267 1087 aaKnown RBP9.79□□□□□ -0.84
CFAP54-209ENST00000637336 CCER1Q8TC90 406 aaPredicted RBP9.61□□□□□ -0.87
CFAP54-209ENST00000637336 MYT1LQ9UL68 1186 aa9.55□□□□□ -0.88
CFAP54-209ENST00000637336 SHROOM4Q9ULL8 1493 aa9.53□□□□□ -0.88
CFAP54-209ENST00000637336 ATP1B4Q9UN42 357 aaPredicted RBP9.48□□□□□ -0.89
CFAP54-209ENST00000637336 ZEB1P37275 1124 aaPredicted RBP9.42□□□□□ -0.9
CFAP54-209ENST00000637336 TRIM41Q8WV44 630 aa9.41□□□□□ -0.9
CFAP54-209ENST00000637336 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.39□□□□□ -0.91
CFAP54-209ENST00000637336 HNRNPUL2Q1KMD3 747 aaKnown RBP9.39□□□□□ -0.91
CFAP54-209ENST00000637336 UBTFP17480 764 aaKnown RBP9.39□□□□□ -0.91
CFAP54-209ENST00000637336 ESF1Q9H501 851 aaKnown RBP9.27□□□□□ -0.93
CFAP54-209ENST00000637336 NEFMP07197 916 aa9.26□□□□□ -0.93
CFAP54-209ENST00000637336 NPM1P06748 294 aaKnown RBP eCLIP9.26□□□□□ -0.93
CFAP54-209ENST00000637336 NEFLP07196 543 aa9.26□□□□□ -0.93
CFAP54-209ENST00000637336 ERICH6Q7L0X2 663 aa9.25□□□□□ -0.93
CFAP54-209ENST00000637336 CENPBP07199 599 aaPredicted RBP9.21□□□□□ -0.93
CFAP54-209ENST00000637336 CDK11AQ9UQ88 783 aaPredicted RBP9.19□□□□□ -0.94
CFAP54-209ENST00000637336 EHMT2Q96KQ7 1210 aa9.18□□□□□ -0.94
CFAP54-209ENST00000637336 ACIN1Q9UKV3 1341 aaKnown RBP9.15□□□□□ -0.94
CFAP54-209ENST00000637336 ABCC9O60706 1549 aa9.15□□□□□ -0.95
CFAP54-209ENST00000637336 RANGAP1P46060 587 aaPredicted RBP9.15□□□□□ -0.95
CFAP54-209ENST00000637336 YTHDC1Q96MU7 727 aaKnown RBP9.14□□□□□ -0.95
CFAP54-209ENST00000637336 DAXXQ9UER7 740 aaPredicted RBP9.11□□□□□ -0.95
CFAP54-209ENST00000637336 ZBTB47Q9UFB7 747 aaPredicted RBP9.08□□□□□ -0.96
CFAP54-209ENST00000637336 SLC4A1APQ9BWU0 796 aaKnown RBP9.04□□□□□ -0.96
CFAP54-209ENST00000637336 TTBK1Q5TCY1 1321 aaPredicted RBP9.04□□□□□ -0.96
CFAP54-209ENST00000637336 BCANQ96GW7 911 aa9.02□□□□□ -0.96
CFAP54-209ENST00000637336 FBLN2P98095 1184 aa9.01□□□□□ -0.97
CFAP54-209ENST00000637336 STAG3Q9UJ98 1225 aa8.96□□□□□ -0.97
CFAP54-209ENST00000637336 PCGF6Q9BYE7 350 aa8.95□□□□□ -0.98
CFAP54-209ENST00000637336 RB1CC1Q8TDY2 1594 aa8.94□□□□□ -0.98
CFAP54-209ENST00000637336 PABPN1Q86U42 306 aaKnown RBP eCLIP8.92□□□□□ -0.98
CFAP54-209ENST00000637336 CHIC1Q5VXU3 224 aa8.91□□□□□ -0.98
CFAP54-209ENST00000637336 TRIM52Q96A61 297 aa8.89□□□□□ -0.99
CFAP54-209ENST00000637336 CCDC180Q9P1Z9 1646 aa8.88□□□□□ -0.99
CFAP54-209ENST00000637336 POLR3GLQ9BT43 218 aa8.88□□□□□ -0.99
CFAP54-209ENST00000637336 NPM2Q86SE8 214 aaKnown RBP8.87□□□□□ -0.99
CFAP54-209ENST00000637336 FAM50AQ14320 339 aaKnown RBP8.82□□□□□ -1
CFAP54-209ENST00000637336 HDGFP51858 240 aaKnown RBP8.82□□□□□ -1
CFAP54-209ENST00000637336 CLSPNQ9HAW4 1339 aa8.81□□□□□ -1
CFAP54-209ENST00000637336 CHMP7Q8WUX9 453 aaPredicted RBP8.8□□□□□ -1
CFAP54-209ENST00000637336 ZNF316A6NFI3 1004 aaPredicted RBP8.79□□□□□ -1
CFAP54-209ENST00000637336 ITGAEP38570 1179 aa8.79□□□□□ -1
CFAP54-209ENST00000637336 NACADO15069 1562 aa8.79□□□□□ -1
CFAP54-209ENST00000637336 MYT1Q01538 1121 aa8.78□□□□□ -1
CFAP54-209ENST00000637336 EIF5BO60841 1220 aaKnown RBP8.77□□□□□ -1
CFAP54-209ENST00000637336 ERCC6Q03468 1493 aa8.77□□□□□ -1
CFAP54-209ENST00000637336 TRIM26Q12899 539 aaPredicted RBP8.77□□□□□ -1.01
CFAP54-209ENST00000637336 SLC24A1O60721 1099 aa8.77□□□□□ -1.01
CFAP54-209ENST00000637336 FOXD1Q16676 465 aa8.77□□□□□ -1.01
CFAP54-209ENST00000637336 TSPY4P0CV99 314 aa8.75□□□□□ -1.01
CFAP54-209ENST00000637336 TSPY10P0CW01 314 aa8.75□□□□□ -1.01
CFAP54-209ENST00000637336 EIF4G2P78344 907 aaKnown RBP eCLIP8.74□□□□□ -1.01
CFAP54-209ENST00000637336 CANXP27824 592 aaKnown RBP8.72□□□□□ -1.01
CFAP54-209ENST00000637336 SCRIBQ14160 1630 aa8.72□□□□□ -1.01
CFAP54-209ENST00000637336 PPP1R15AO75807 674 aaPredicted RBP8.71□□□□□ -1.01
CFAP54-209ENST00000637336 RSF1Q96T23 1441 aaPredicted RBP8.71□□□□□ -1.01
CFAP54-209ENST00000637336 HAP1P54257 671 aaPredicted RBP8.71□□□□□ -1.02
CFAP54-209ENST00000637336 C14orf37Q86TY3 774 aa8.68□□□□□ -1.02
CFAP54-209ENST00000637336 ANO8Q9HCE9 1232 aaPredicted RBP8.67□□□□□ -1.02
CFAP54-209ENST00000637336 CDK11BP21127 795 aaKnown RBP8.66□□□□□ -1.02
CFAP54-209ENST00000637336 CDCA8Q53HL2 280 aa8.66□□□□□ -1.02
CFAP54-209ENST00000637336 AEBP2Q6ZN18 517 aaPredicted RBP8.66□□□□□ -1.02
CFAP54-209ENST00000637336 ZNF777Q9ULD5 760 aaPredicted RBP8.66□□□□□ -1.02
CFAP54-209ENST00000637336 ARID4BQ4LE39 1312 aaPredicted RBP8.66□□□□□ -1.02
CFAP54-209ENST00000637336 PLEKHD1A6NEE1 506 aa8.66□□□□□ -1.02
CFAP54-209ENST00000637336 CHGAP10645 457 aaKnown RBP8.65□□□□□ -1.02
CFAP54-209ENST00000637336 EEA1Q15075 1411 aa8.64□□□□□ -1.03
CFAP54-209ENST00000637336 ANP32CO43423 234 aa8.64□□□□□ -1.03
CFAP54-209ENST00000637336 CSRNP3Q8WYN3 585 aa8.63□□□□□ -1.03
CFAP54-209ENST00000637336 CHMP4AQ9BY43 222 aa8.63□□□□□ -1.03
CFAP54-209ENST00000637336 DCAF8L1A6NGE4 600 aa8.62□□□□□ -1.03
CFAP54-209ENST00000637336 KANK1Q14678 1352 aa8.61□□□□□ -1.03
CFAP54-209ENST00000637336 RTL5Q5HYW3 569 aaPredicted RBP8.61□□□□□ -1.03
CFAP54-209ENST00000637336 HMGB2P26583 209 aaKnown RBP8.61□□□□□ -1.03
CFAP54-209ENST00000637336 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.6□□□□□ -1.03
CFAP54-209ENST00000637336 ZNF326Q5BKZ1 582 aaKnown RBP8.59□□□□□ -1.03
CFAP54-209ENST00000637336 PDS5BQ9NTI5 1447 aa8.59□□□□□ -1.03
CFAP54-209ENST00000637336 TRHP20396 242 aaPredicted RBP8.59□□□□□ -1.04
CFAP54-209ENST00000637336 SCAF1Q9H7N4 1312 aaKnown RBP8.58□□□□□ -1.04
CFAP54-209ENST00000637336 CHMP4BQ9H444 224 aaKnown RBP8.58□□□□□ -1.04
CFAP54-209ENST00000637336 BAZ1BQ9UIG0 1483 aaKnown RBP8.57□□□□□ -1.04
CFAP54-209ENST00000637336 PNNQ9H307 717 aaKnown RBP8.57□□□□□ -1.04
CFAP54-209ENST00000637336 MYH16Q9H6N6 1097 aa8.57□□□□□ -1.04
CFAP54-209ENST00000637336 CLIP1P30622 1438 aa8.56□□□□□ -1.04
CFAP54-209ENST00000637336 TMX4Q9H1E5 349 aaPredicted RBP8.56□□□□□ -1.04
CFAP54-209ENST00000637336 CARMIL2Q6F5E8 1435 aa8.56□□□□□ -1.04
CFAP54-209ENST00000637336 MTUS2Q5JR59 1369 aa8.56□□□□□ -1.04
CFAP54-209ENST00000637336 UPF2Q9HAU5 1272 aaKnown RBP8.55□□□□□ -1.04
CFAP54-209ENST00000637336 CFAP53Q96M91 514 aa8.54□□□□□ -1.04
CFAP54-209ENST00000637336 TONSLQ96HA7 1378 aa8.53□□□□□ -1.04
CFAP54-209ENST00000637336 ANP32BQ92688 251 aaKnown RBP8.53□□□□□ -1.04
CFAP54-209ENST00000637336 ZCCHC6Q5VYS8 1495 aaKnown RBP8.53□□□□□ -1.04
CFAP54-209ENST00000637336 CEP162Q5TB80 1403 aa8.52□□□□□ -1.04
CFAP54-209ENST00000637336 PLPPR3Q6T4P5 718 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms