RNA–Protein interactions for RNA: ENST00000637293.1

GABRB3-223, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-223ENST00000637293 K7EIM0 57 aa0.55□□□□□ -2.32
GABRB3-223ENST00000637293 ZNF469Q96JG9 3925 aaPredicted RBP0.55□□□□□ -2.32
GABRB3-223ENST00000637293 WNK1Q9H4A3 2382 aa0.55□□□□□ -2.32
GABRB3-223ENST00000637293 FLNCQ14315 2725 aa0.55□□□□□ -2.32
GABRB3-223ENST00000637293 ACANP16112 2415 aa0.55□□□□□ -2.32
GABRB3-223ENST00000637293 FRAS1Q86XX4 4008 aa0.54□□□□□ -2.32
GABRB3-223ENST00000637293 USP24Q9UPU5 2620 aa0.54□□□□□ -2.32
GABRB3-223ENST00000637293 GCN1Q92616 2671 aaKnown RBP0.54□□□□□ -2.32
GABRB3-223ENST00000637293 ACACAQ13085 2346 aa0.54□□□□□ -2.32
GABRB3-223ENST00000637293 PDZD2O15018 2839 aa0.54□□□□□ -2.32
GABRB3-223ENST00000637293 SPART-AS1P0CW21 52 aa0.54□□□□□ -2.32
GABRB3-223ENST00000637293 DEFB110Q30KQ9 67 aa0.54□□□□□ -2.32
GABRB3-223ENST00000637293 KRTAP5-7Q6L8G8 165 aa0.54□□□□□ -2.32
GABRB3-223ENST00000637293 MTORP42345 2549 aa0.54□□□□□ -2.32
GABRB3-223ENST00000637293 APC2O95996 2303 aa0.53□□□□□ -2.32
GABRB3-223ENST00000637293 CHD7Q9P2D1 2997 aa0.53□□□□□ -2.32
GABRB3-223ENST00000637293 H3BSH0 61 aa0.53□□□□□ -2.32
GABRB3-223ENST00000637293 SPRR2DP22532 72 aa0.53□□□□□ -2.32
GABRB3-223ENST00000637293 EPG5Q9HCE0 2579 aa0.52□□□□□ -2.33
GABRB3-223ENST00000637293 ZZEF1O43149 2961 aa0.52□□□□□ -2.33
GABRB3-223ENST00000637293 DMBT1Q9UGM3 2413 aaPredicted RBP0.52□□□□□ -2.33
GABRB3-223ENST00000637293 GPR98Q8WXG9 6306 aa0.52□□□□□ -2.33
GABRB3-223ENST00000637293 TMEM167AQ8TBQ9 72 aa0.52□□□□□ -2.33
GABRB3-223ENST00000637293 FLNBO75369 2602 aaKnown RBP0.52□□□□□ -2.33
GABRB3-223ENST00000637293 SPRR2BP35325 72 aa0.51□□□□□ -2.33
GABRB3-223ENST00000637293 RIF1Q5UIP0 2472 aaKnown RBP0.51□□□□□ -2.33
GABRB3-223ENST00000637293 NSD1Q96L73 2696 aaPredicted RBP0.51□□□□□ -2.33
GABRB3-223ENST00000637293 BSNQ9UPA5 3926 aa0.51□□□□□ -2.33
GABRB3-223ENST00000637293 ANKRD11Q6UB99 2663 aaPredicted RBP0.51□□□□□ -2.33
GABRB3-223ENST00000637293 SPTBN4Q9H254 2564 aa0.51□□□□□ -2.33
GABRB3-223ENST00000637293 LRRK2Q5S007 2527 aa0.5□□□□□ -2.33
GABRB3-223ENST00000637293 PRKDCP78527 4128 aaKnown RBP0.5□□□□□ -2.33
GABRB3-223ENST00000637293 DEFB104AQ8WTQ1 72 aa0.5□□□□□ -2.33
GABRB3-223ENST00000637293 TENM2Q9NT68 2774 aa0.5□□□□□ -2.33
GABRB3-223ENST00000637293 CCDC168Q8NDH2 2452 aa0.49□□□□□ -2.33
GABRB3-223ENST00000637293 FAM186AA6NE01 2351 aa0.49□□□□□ -2.33
GABRB3-223ENST00000637293 TACC2O95359 2948 aa0.49□□□□□ -2.33
GABRB3-223ENST00000637293 MUC19Q7Z5P9 8384 aa0.49□□□□□ -2.33
GABRB3-223ENST00000637293 UTP20O75691 2785 aaKnown RBP0.49□□□□□ -2.33
GABRB3-223ENST00000637293 KRTAP21-1Q3LI58 79 aa0.49□□□□□ -2.33
GABRB3-223ENST00000637293 NCOR2Q9Y618 2525 aa0.48□□□□□ -2.33
GABRB3-223ENST00000637293 MUC5BQ9HC84 5762 aaPredicted RBP0.48□□□□□ -2.33
GABRB3-223ENST00000637293 DMXL1Q9Y485 3027 aa0.48□□□□□ -2.33
GABRB3-223ENST00000637293 FAT2Q9NYQ8 4349 aa0.48□□□□□ -2.33
GABRB3-223ENST00000637293 FRYQ5TBA9 3013 aa0.48□□□□□ -2.33
GABRB3-223ENST00000637293 USP9YO00507 2555 aaPredicted RBP0.48□□□□□ -2.33
GABRB3-223ENST00000637293 LYSTQ99698 3801 aa0.47□□□□□ -2.33
GABRB3-223ENST00000637293 CRYBG3Q68DQ2 2970 aa0.47□□□□□ -2.33
GABRB3-223ENST00000637293 NBEAQ8NFP9 2946 aa0.47□□□□□ -2.33
GABRB3-223ENST00000637293 IGSF10Q6WRI0 2623 aa0.47□□□□□ -2.33
GABRB3-223ENST00000637293 ANKHD1Q8IWZ3 2542 aaKnown RBP0.46□□□□□ -2.34
GABRB3-223ENST00000637293 STAB1Q9NY15 2570 aa0.46□□□□□ -2.34
GABRB3-223ENST00000637293 H3BUX3 64 aa0.46□□□□□ -2.34
GABRB3-223ENST00000637293 KRTAP8-1Q8IUC2 63 aa0.46□□□□□ -2.34
GABRB3-223ENST00000637293 RHPN1-AS1Q9BWJ2 59 aa0.46□□□□□ -2.34
GABRB3-223ENST00000637293 CACNA1AO00555 2505 aa0.46□□□□□ -2.34
GABRB3-223ENST00000637293 ITPR3Q14573 2671 aa0.46□□□□□ -2.34
GABRB3-223ENST00000637293 HUWE1Q7Z6Z7 4374 aaKnown RBP0.45□□□□□ -2.34
GABRB3-223ENST00000637293 NBEAL2Q6ZNJ1 2754 aa0.45□□□□□ -2.34
GABRB3-223ENST00000637293 SPRR2AP35326 72 aa0.45□□□□□ -2.34
GABRB3-223ENST00000637293 DCHS2Q6V1P9 2916 aa0.45□□□□□ -2.34
GABRB3-223ENST00000637293 COL12A1Q99715 3063 aa0.45□□□□□ -2.34
GABRB3-223ENST00000637293 SONP18583 2426 aaKnown RBP0.45□□□□□ -2.34
GABRB3-223ENST00000637293 SPG11Q96JI7 2443 aa0.45□□□□□ -2.34
GABRB3-223ENST00000637293 MT1AP04731 61 aa0.44□□□□□ -2.34
GABRB3-223ENST00000637293 ACACBO00763 2458 aa0.44□□□□□ -2.34
GABRB3-223ENST00000637293 VPS13BQ7Z7G8 4022 aa0.43□□□□□ -2.34
GABRB3-223ENST00000637293 COL7A1Q02388 2944 aa0.43□□□□□ -2.34
GABRB3-223ENST00000637293 HIVEP1P15822 2718 aa0.43□□□□□ -2.34
GABRB3-223ENST00000637293 HRNRQ86YZ3 2850 aaPredicted RBP0.43□□□□□ -2.34
GABRB3-223ENST00000637293 CRCT1Q9UGL9 99 aa0.43□□□□□ -2.34
GABRB3-223ENST00000637293 KMT2AQ03164 3969 aa0.43□□□□□ -2.34
GABRB3-223ENST00000637293 TENM3Q9P273 2699 aa0.42□□□□□ -2.34
GABRB3-223ENST00000637293 RANBP2P49792 3224 aaKnown RBP0.42□□□□□ -2.34
GABRB3-223ENST00000637293 TGP01266 2768 aa0.42□□□□□ -2.34
GABRB3-223ENST00000637293 KALRNO60229 2985 aa0.42□□□□□ -2.34
GABRB3-223ENST00000637293 KRTAP21-2Q3LI59 83 aa0.42□□□□□ -2.34
GABRB3-223ENST00000637293 RPL39P5Q59GN2 51 aa0.42□□□□□ -2.34
GABRB3-223ENST00000637293 ZANQ9Y493 2812 aa0.42□□□□□ -2.34
GABRB3-223ENST00000637293 ITPR1Q14643 2758 aa0.41□□□□□ -2.34
GABRB3-223ENST00000637293 FLNAP21333 2647 aaKnown RBP0.41□□□□□ -2.34
GABRB3-223ENST00000637293 KRTAP4-1Q9BYQ7 146 aa0.41□□□□□ -2.34
GABRB3-223ENST00000637293 TLN2Q9Y4G6 2542 aa0.41□□□□□ -2.34
GABRB3-223ENST00000637293 MYCBP2O75592 4640 aa0.41□□□□□ -2.34
GABRB3-223ENST00000637293 TEP1Q99973 2627 aaKnown RBP0.41□□□□□ -2.34
GABRB3-223ENST00000637293 SACSQ9NZJ4 4579 aa0.4□□□□□ -2.34
GABRB3-223ENST00000637293 AHNAKQ09666 5890 aaKnown RBP0.4□□□□□ -2.35
GABRB3-223ENST00000637293 FASNP49327 2511 aaKnown RBP0.4□□□□□ -2.35
GABRB3-223ENST00000637293 CELSR3Q9NYQ7 3312 aa0.4□□□□□ -2.35
GABRB3-223ENST00000637293 HTTP42858 3142 aa0.4□□□□□ -2.35
GABRB3-223ENST00000637293 MXRA5Q9NR99 2828 aa0.39□□□□□ -2.35
GABRB3-223ENST00000637293 MYO18BQ8IUG5 2567 aa0.39□□□□□ -2.35
GABRB3-223ENST00000637293 PKD1P98161 4303 aa0.39□□□□□ -2.35
GABRB3-223ENST00000637293 CUBNO60494 3623 aa0.38□□□□□ -2.35
GABRB3-223ENST00000637293 USP9XQ93008 2570 aaPredicted RBP0.38□□□□□ -2.35
GABRB3-223ENST00000637293 DEFB108AA8MXU0 73 aa0.38□□□□□ -2.35
GABRB3-223ENST00000637293 SPRR2EP22531 72 aa0.38□□□□□ -2.35
GABRB3-223ENST00000637293 KRTAP6-2Q3LI66 62 aa0.38□□□□□ -2.35
GABRB3-223ENST00000637293 MGAQ8IWI9 3026 aa0.38□□□□□ -2.35
GABRB3-223ENST00000637293 COL6A3P12111 3177 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms