RNA–Protein interactions for RNA: ENST00000636709.1

CHRNA7-219, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 7,722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-219ENST00000636709 APCP25054 2843 aa4.89□□□□□ -1.63
CHRNA7-219ENST00000636709 LAMA1P25391 3075 aa4.88□□□□□ -1.63
CHRNA7-219ENST00000636709 KRTAP29-1A8MX34 341 aaPredicted RBP4.87□□□□□ -1.63
CHRNA7-219ENST00000636709 FRYLO94915 3013 aa4.86□□□□□ -1.63
CHRNA7-219ENST00000636709 KRTAP21-3Q3LHN1 58 aa4.86□□□□□ -1.63
CHRNA7-219ENST00000636709 UTP20O75691 2785 aaKnown RBP4.85□□□□□ -1.63
CHRNA7-219ENST00000636709 UBR5O95071 2799 aaPredicted RBP4.85□□□□□ -1.63
CHRNA7-219ENST00000636709 NSD1Q96L73 2696 aaPredicted RBP4.85□□□□□ -1.63
CHRNA7-219ENST00000636709 ASB16-AS1Q495Z4 193 aa4.85□□□□□ -1.63
CHRNA7-219ENST00000636709 KRTAP7-1Q8IUC3 87 aa4.84□□□□□ -1.63
CHRNA7-219ENST00000636709 BOD1L1Q8NFC6 3051 aa4.83□□□□□ -1.64
CHRNA7-219ENST00000636709 ASPMQ8IZT6 3477 aa4.83□□□□□ -1.64
CHRNA7-219ENST00000636709 MYO15AQ9UKN7 3530 aa4.82□□□□□ -1.64
CHRNA7-219ENST00000636709 TACC2O95359 2948 aa4.82□□□□□ -1.64
CHRNA7-219ENST00000636709 ASH1LQ9NR48 2969 aaKnown RBP4.82□□□□□ -1.64
CHRNA7-219ENST00000636709 ATMQ13315 3056 aa4.81□□□□□ -1.64
CHRNA7-219ENST00000636709 HIVEP1P15822 2718 aa4.8□□□□□ -1.64
CHRNA7-219ENST00000636709 KRTAP25-1Q3LHN0 102 aa4.8□□□□□ -1.64
CHRNA7-219ENST00000636709 XP32Q5T750 250 aa4.8□□□□□ -1.64
CHRNA7-219ENST00000636709 KRTAP16-1A8MUX0 517 aa4.79□□□□□ -1.64
CHRNA7-219ENST00000636709 NDUFAF8A1L188 74 aa4.77□□□□□ -1.65
CHRNA7-219ENST00000636709 ITPR1Q14643 2758 aa4.77□□□□□ -1.65
CHRNA7-219ENST00000636709 COL12A1Q99715 3063 aa4.77□□□□□ -1.65
CHRNA7-219ENST00000636709 EYSQ5T1H1 3165 aa4.77□□□□□ -1.65
CHRNA7-219ENST00000636709 PRO2289Q9P1D8 64 aa4.76□□□□□ -1.65
CHRNA7-219ENST00000636709 KRTAP13-1Q8IUC0 172 aa4.75□□□□□ -1.65
CHRNA7-219ENST00000636709 NBPF19A0A087WUL8 3843 aa4.74□□□□□ -1.65
CHRNA7-219ENST00000636709 WDFY3Q8IZQ1 3526 aa4.73□□□□□ -1.65
CHRNA7-219ENST00000636709 P0C880 135 aa4.71□□□□□ -1.66
CHRNA7-219ENST00000636709 ADGRG4Q8IZF6 3080 aa4.71□□□□□ -1.66
CHRNA7-219ENST00000636709 ZZEF1O43149 2961 aa4.68□□□□□ -1.66
CHRNA7-219ENST00000636709 FLNCQ14315 2725 aa4.68□□□□□ -1.66
CHRNA7-219ENST00000636709 TPRXLQ17RH7 258 aa4.67□□□□□ -1.66
CHRNA7-219ENST00000636709 TENM4Q6N022 2769 aa4.66□□□□□ -1.66
CHRNA7-219ENST00000636709 NBEAQ8NFP9 2946 aa4.65□□□□□ -1.67
CHRNA7-219ENST00000636709 CELSR2Q9HCU4 2923 aa4.64□□□□□ -1.67
CHRNA7-219ENST00000636709 KRTAP1-4P0C5Y4 121 aa4.63□□□□□ -1.67
CHRNA7-219ENST00000636709 TENM1Q9UKZ4 2725 aa4.63□□□□□ -1.67
CHRNA7-219ENST00000636709 LOC400499M0QZD8 3231 aa4.61□□□□□ -1.67
CHRNA7-219ENST00000636709 A6NN06 94 aa4.6□□□□□ -1.67
CHRNA7-219ENST00000636709 DCHS1Q96JQ0 3298 aa4.58□□□□□ -1.68
CHRNA7-219ENST00000636709 DMXL1Q9Y485 3027 aa4.58□□□□□ -1.68
CHRNA7-219ENST00000636709 PP632Q6XCG6 107 aa4.58□□□□□ -1.68
CHRNA7-219ENST00000636709 TNRC18O15417 2968 aaPredicted RBP4.57□□□□□ -1.68
CHRNA7-219ENST00000636709 LAMA5O15230 3695 aa4.56□□□□□ -1.68
CHRNA7-219ENST00000636709 KRTAP13-3Q3SY46 172 aa4.56□□□□□ -1.68
CHRNA7-219ENST00000636709 DCHS2Q6V1P9 2916 aa4.56□□□□□ -1.68
CHRNA7-219ENST00000636709 ZFHX4Q86UP3 3567 aa4.54□□□□□ -1.68
CHRNA7-219ENST00000636709 TENM2Q9NT68 2774 aa4.52□□□□□ -1.69
CHRNA7-219ENST00000636709 CELSR1Q9NYQ6 3014 aa4.52□□□□□ -1.69
CHRNA7-219ENST00000636709 H0YAA0 97 aa4.5□□□□□ -1.69
CHRNA7-219ENST00000636709 NF1P21359 2839 aa4.5□□□□□ -1.69
CHRNA7-219ENST00000636709 RELNP78509 3460 aa4.46□□□□□ -1.7
CHRNA7-219ENST00000636709 PKD1L1Q8TDX9 2849 aa4.45□□□□□ -1.7
CHRNA7-219ENST00000636709 VWFP04275 2813 aa4.45□□□□□ -1.7
CHRNA7-219ENST00000636709 ZFHX3Q15911 3703 aa4.44□□□□□ -1.7
CHRNA7-219ENST00000636709 CRCT1Q9UGL9 99 aa4.42□□□□□ -1.7
CHRNA7-219ENST00000636709 TENM3Q9P273 2699 aa4.42□□□□□ -1.7
CHRNA7-219ENST00000636709 NIPBLQ6KC79 2804 aaeCLIP4.42□□□□□ -1.7
CHRNA7-219ENST00000636709 CSMD1Q96PZ7 3565 aa4.41□□□□□ -1.7
CHRNA7-219ENST00000636709 FBN2P35556 2912 aa4.4□□□□□ -1.7
CHRNA7-219ENST00000636709 ZANQ9Y493 2812 aa4.39□□□□□ -1.71
CHRNA7-219ENST00000636709 KRTAP12-2P59991 146 aa4.38□□□□□ -1.71
CHRNA7-219ENST00000636709 SPENQ96T58 3664 aaKnown RBP4.36□□□□□ -1.71
CHRNA7-219ENST00000636709 TGP01266 2768 aa4.35□□□□□ -1.71
CHRNA7-219ENST00000636709 HRNRQ86YZ3 2850 aaPredicted RBP4.32□□□□□ -1.72
CHRNA7-219ENST00000636709 KRTAP15-1Q3LI76 137 aa4.32□□□□□ -1.72
CHRNA7-219ENST00000636709 DMDP11532 3685 aa4.32□□□□□ -1.72
CHRNA7-219ENST00000636709 PDZD2O15018 2839 aa4.3□□□□□ -1.72
CHRNA7-219ENST00000636709 SMG1Q96Q15 3661 aaKnown RBP4.3□□□□□ -1.72
CHRNA7-219ENST00000636709 CUBNO60494 3623 aa4.24□□□□□ -1.73
CHRNA7-219ENST00000636709 KRTAP13-4Q3LI77 160 aa4.23□□□□□ -1.73
CHRNA7-219ENST00000636709 MXRA5Q9NR99 2828 aa4.23□□□□□ -1.73
CHRNA7-219ENST00000636709 MUC3AQ02505 3323 aa4.21□□□□□ -1.74
CHRNA7-219ENST00000636709 SVEP1Q4LDE5 3571 aa4.19□□□□□ -1.74
CHRNA7-219ENST00000636709 CSMD2Q7Z408 3487 aa4.17□□□□□ -1.74
CHRNA7-219ENST00000636709 KRTAP12-1P59990 96 aa4.17□□□□□ -1.74
CHRNA7-219ENST00000636709 KRTAP4-5Q9BYR2 181 aa4.12□□□□□ -1.75
CHRNA7-219ENST00000636709 SRRM2Q9UQ35 2752 aaKnown RBP4.11□□□□□ -1.75
CHRNA7-219ENST00000636709 TRRAPQ9Y4A5 3859 aa4.1□□□□□ -1.75
CHRNA7-219ENST00000636709 KRTAP10-12P60413 245 aa4.07□□□□□ -1.76
CHRNA7-219ENST00000636709 MEGF8Q7Z7M0 2845 aa4.06□□□□□ -1.76
CHRNA7-219ENST00000636709 LORP23490 312 aaPredicted RBP4.06□□□□□ -1.76
CHRNA7-219ENST00000636709 COL7A1Q02388 2944 aa4.05□□□□□ -1.76
CHRNA7-219ENST00000636709 KRTAP3-1Q9BYR8 98 aa4.05□□□□□ -1.76
CHRNA7-219ENST00000636709 FBN1P35555 2871 aaKnown RBP4.05□□□□□ -1.76
CHRNA7-219ENST00000636709 VPS13CQ709C8 3753 aa4.04□□□□□ -1.76
CHRNA7-219ENST00000636709 ANK3Q12955 4377 aaKnown RBP4.04□□□□□ -1.76
CHRNA7-219ENST00000636709 CSMD3Q7Z407 3707 aa4□□□□□ -1.77
CHRNA7-219ENST00000636709 MT1HL1P0DM35 61 aa3.98□□□□□ -1.77
CHRNA7-219ENST00000636709 FBN3Q75N90 2809 aa3.96□□□□□ -1.78
CHRNA7-219ENST00000636709 BSNQ9UPA5 3926 aa3.95□□□□□ -1.78
CHRNA7-219ENST00000636709 HUWE1Q7Z6Z7 4374 aaKnown RBP3.93□□□□□ -1.78
CHRNA7-219ENST00000636709 KRTAP8-1Q8IUC2 63 aa3.92□□□□□ -1.78
CHRNA7-219ENST00000636709 ALMS1Q8TCU4 4167 aa3.92□□□□□ -1.78
CHRNA7-219ENST00000636709 KRTAP10-6P60371 365 aaPredicted RBP3.9□□□□□ -1.79
CHRNA7-219ENST00000636709 OTOGQ6ZRI0 2925 aa3.89□□□□□ -1.79
CHRNA7-219ENST00000636709 KRTAP10-5P60370 271 aa3.88□□□□□ -1.79
CHRNA7-219ENST00000636709 KRTAP12-3P60328 96 aa3.87□□□□□ -1.79
CHRNA7-219ENST00000636709 LCE3AQ5TA76 89 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms