RNA–Protein interactions for RNA: ENST00000636443.1

SYNGAP1-215, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 79 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-215ENST00000636443 FAM74A3Q4VXF1 159 aa0.46□□□□□ -2.34
SYNGAP1-215ENST00000636443 LINC00575Q6W349 94 aa0.46□□□□□ -2.34
SYNGAP1-215ENST00000636443 Q6ZVQ6 151 aa0.46□□□□□ -2.34
SYNGAP1-215ENST00000636443 MUSTN1Q8IVN3 82 aa0.46□□□□□ -2.34
SYNGAP1-215ENST00000636443 C20orf197Q8N268 126 aa0.46□□□□□ -2.34
SYNGAP1-215ENST00000636443 BATF3Q9NR55 127 aa0.46□□□□□ -2.34
SYNGAP1-215ENST00000636443 SPANXCQ9NY87 97 aa0.46□□□□□ -2.34
SYNGAP1-215ENST00000636443 LAMTOR2Q9Y2Q5 125 aa0.46□□□□□ -2.34
SYNGAP1-215ENST00000636443 A0A087WVE0 104 aa0.45□□□□□ -2.34
SYNGAP1-215ENST00000636443 FAM240BA0A1B0GVZ2 78 aa0.45□□□□□ -2.34
SYNGAP1-215ENST00000636443 hADV29S1A0JD25 119 aa0.45□□□□□ -2.34
SYNGAP1-215ENST00000636443 LINC01549A6NIU2 74 aa0.45□□□□□ -2.34
SYNGAP1-215ENST00000636443 HCG22E2RYF7 251 aa0.45□□□□□ -2.34
SYNGAP1-215ENST00000636443 NDUFC1O43677 76 aa0.45□□□□□ -2.34
SYNGAP1-215ENST00000636443 MT1AP04731 61 aa0.45□□□□□ -2.34
SYNGAP1-215ENST00000636443 VAMP3Q15836 100 aa0.45□□□□□ -2.34
SYNGAP1-215ENST00000636443 KRTAP21-1Q3LI58 79 aa0.45□□□□□ -2.34
SYNGAP1-215ENST00000636443 BAGE3Q86Y29 109 aa0.45□□□□□ -2.34
SYNGAP1-215ENST00000636443 KRTAP3-3Q9BYR6 98 aa0.45□□□□□ -2.34
SYNGAP1-215ENST00000636443 SMCO4Q9NRQ5 59 aa0.45□□□□□ -2.34
SYNGAP1-215ENST00000636443 V9GYH0 126 aa0.45□□□□□ -2.34
SYNGAP1-215ENST00000636443 A0A1B0GV72 72 aa0.44□□□□□ -2.34
SYNGAP1-215ENST00000636443 UMAD1C9J7I0 102 aa0.44□□□□□ -2.34
SYNGAP1-215ENST00000636443 EIF4EBP3O60516 100 aaPredicted RBP0.44□□□□□ -2.34
SYNGAP1-215ENST00000636443 MT3P25713 68 aa0.44□□□□□ -2.34
SYNGAP1-215ENST00000636443 TCTE3Q8IZS6 198 aa0.44□□□□□ -2.34
SYNGAP1-215ENST00000636443 C12orf57Q99622 126 aa0.44□□□□□ -2.34
SYNGAP1-215ENST00000636443 KRTAP3-1Q9BYR8 98 aa0.44□□□□□ -2.34
SYNGAP1-215ENST00000636443 RPS10P5Q9NQ39 176 aa0.44□□□□□ -2.34
SYNGAP1-215ENST00000636443 C8orf17Q9NRJ1 99 aa0.44□□□□□ -2.34
SYNGAP1-215ENST00000636443 OSTCQ9NRP0 149 aa0.44□□□□□ -2.34
SYNGAP1-215ENST00000636443 V9GYV3 84 aa0.44□□□□□ -2.34
SYNGAP1-215ENST00000636443 A0A1B0GXF2 115 aa0.43□□□□□ -2.34
SYNGAP1-215ENST00000636443 H3BMG7 143 aa0.43□□□□□ -2.34
SYNGAP1-215ENST00000636443 SERF1AO75920 110 aa0.43□□□□□ -2.34
SYNGAP1-215ENST00000636443 TRACP01848 142 aa0.43□□□□□ -2.34
SYNGAP1-215ENST00000636443 TRGC2P03986 189 aa0.43□□□□□ -2.34
SYNGAP1-215ENST00000636443 LINC00308Q8TCZ7 52 aa0.43□□□□□ -2.34
SYNGAP1-215ENST00000636443 PPDPFLQ8WWR9 84 aa0.43□□□□□ -2.34
SYNGAP1-215ENST00000636443 SMIM7Q9BQ49 75 aa0.43□□□□□ -2.34
SYNGAP1-215ENST00000636443 VPS25Q9BRG1 176 aa0.43□□□□□ -2.34
SYNGAP1-215ENST00000636443 SMIM27A0A1W2PRY6 76 aa0.42□□□□□ -2.34
SYNGAP1-215ENST00000636443 J3KT08 172 aa0.42□□□□□ -2.34
SYNGAP1-215ENST00000636443 J3QQQ9 107 aa0.42□□□□□ -2.34
SYNGAP1-215ENST00000636443 TIMM17BO60830 172 aa0.42□□□□□ -2.34
SYNGAP1-215ENST00000636443 NDUFV3P56181 108 aaKnown RBP0.42□□□□□ -2.34
SYNGAP1-215ENST00000636443 TSPEAR-AS2P59090 65 aa0.42□□□□□ -2.34
SYNGAP1-215ENST00000636443 ADIRFQ15847 76 aa0.42□□□□□ -2.34
SYNGAP1-215ENST00000636443 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.42□□□□□ -2.34
SYNGAP1-215ENST00000636443 ATP5L2Q7Z4Y8 100 aa0.42□□□□□ -2.34
SYNGAP1-215ENST00000636443 MRPL34Q9BQ48 92 aaKnown RBP0.42□□□□□ -2.34
SYNGAP1-215ENST00000636443 MUC19Q7Z5P9 8384 aa0.42□□□□□ -2.34
SYNGAP1-215ENST00000636443 TRBV7-4A0A0J9YYF1 115 aa0.41□□□□□ -2.34
SYNGAP1-215ENST00000636443 H0Y8G0 127 aa0.41□□□□□ -2.34
SYNGAP1-215ENST00000636443 ARPC5O15511 151 aa0.41□□□□□ -2.34
SYNGAP1-215ENST00000636443 FABP2P12104 132 aa0.41□□□□□ -2.34
SYNGAP1-215ENST00000636443 HERVK_113P61574 105 aa0.41□□□□□ -2.34
SYNGAP1-215ENST00000636443 ANKRD29Q8N6D5 301 aa0.41□□□□□ -2.34
SYNGAP1-215ENST00000636443 TMEM254Q8TBM7 123 aa0.41□□□□□ -2.34
SYNGAP1-215ENST00000636443 SMIM11BQ8TCY0 68 aa0.41□□□□□ -2.34
SYNGAP1-215ENST00000636443 SNCGO76070 127 aa0.4□□□□□ -2.35
SYNGAP1-215ENST00000636443 CCKP06307 115 aa0.4□□□□□ -2.35
SYNGAP1-215ENST00000636443 PMCHL1Q16048 86 aa0.4□□□□□ -2.35
SYNGAP1-215ENST00000636443 UQCC3Q6UW78 93 aa0.4□□□□□ -2.35
SYNGAP1-215ENST00000636443 PAM16Q9Y3D7 125 aa0.4□□□□□ -2.35
SYNGAP1-215ENST00000636443 LOC110117498A0A087WWA1 95 aa0.39□□□□□ -2.35
SYNGAP1-215ENST00000636443 KANTRA0A1W2PQU2 76 aa0.39□□□□□ -2.35
SYNGAP1-215ENST00000636443 IFITM1P13164 125 aa0.39□□□□□ -2.35
SYNGAP1-215ENST00000636443 Q6ZQT0 140 aa0.39□□□□□ -2.35
SYNGAP1-215ENST00000636443 COPS9Q8WXC6 57 aa0.39□□□□□ -2.35
SYNGAP1-215ENST00000636443 NAA38Q9BRA0 125 aaKnown RBP0.39□□□□□ -2.35
SYNGAP1-215ENST00000636443 KRTAP4-4Q9BYR3 166 aa0.39□□□□□ -2.35
SYNGAP1-215ENST00000636443 HSPB8Q9UJY1 196 aa0.39□□□□□ -2.35
SYNGAP1-215ENST00000636443 TRAV12-1A0A0B4J245 112 aa0.38□□□□□ -2.35
SYNGAP1-215ENST00000636443 MMP24-AS1A0A0U1RRL7 71 aa0.38□□□□□ -2.35
SYNGAP1-215ENST00000636443 LINC00614P0C842 121 aa0.38□□□□□ -2.35
SYNGAP1-215ENST00000636443 S100PP25815 95 aa0.38□□□□□ -2.35
SYNGAP1-215ENST00000636443 PLNP26678 52 aa0.38□□□□□ -2.35
SYNGAP1-215ENST00000636443 S100ZQ8WXG8 99 aa0.38□□□□□ -2.35
SYNGAP1-215ENST00000636443 K7EP34 96 aa0.37□□□□□ -2.35
SYNGAP1-215ENST00000636443 KRTAP12-3P60328 96 aa0.37□□□□□ -2.35
SYNGAP1-215ENST00000636443 KRTAP21-2Q3LI59 83 aa0.37□□□□□ -2.35
SYNGAP1-215ENST00000636443 BVES-AS1Q5T3Y7 98 aa0.37□□□□□ -2.35
SYNGAP1-215ENST00000636443 IFI27L1Q96BM0 104 aa0.37□□□□□ -2.35
SYNGAP1-215ENST00000636443 A0A096LNJ9 63 aa0.36□□□□□ -2.35
SYNGAP1-215ENST00000636443 ACYP1P07311 99 aa0.36□□□□□ -2.35
SYNGAP1-215ENST00000636443 CXCL6P80162 114 aa0.36□□□□□ -2.35
SYNGAP1-215ENST00000636443 KRTAP25-1Q3LHN0 102 aa0.36□□□□□ -2.35
SYNGAP1-215ENST00000636443 SCGB1D4Q6XE38 83 aa0.36□□□□□ -2.35
SYNGAP1-215ENST00000636443 CASC2Q6XLA1 102 aa0.36□□□□□ -2.35
SYNGAP1-215ENST00000636443 SMLR1H3BR10 107 aa0.35□□□□□ -2.35
SYNGAP1-215ENST00000636443 DPM2O94777 84 aa0.35□□□□□ -2.35
SYNGAP1-215ENST00000636443 FABP9Q0Z7S8 132 aa0.35□□□□□ -2.35
SYNGAP1-215ENST00000636443 C21orf62-AS1Q17RA5 79 aa0.35□□□□□ -2.35
SYNGAP1-215ENST00000636443 PMCHL2Q9BQD1 86 aa0.35□□□□□ -2.35
SYNGAP1-215ENST00000636443 IGKCP01834 107 aa0.34□□□□□ -2.36
SYNGAP1-215ENST00000636443 SRP19P09132 144 aaKnown RBP0.34□□□□□ -2.36
SYNGAP1-215ENST00000636443 SEC11CQ9BY50 192 aa0.34□□□□□ -2.36
SYNGAP1-215ENST00000636443 E9PLD3 99 aa0.33□□□□□ -2.36
SYNGAP1-215ENST00000636443 DNAL4O96015 105 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms