RNA–Protein interactions for RNA: ENST00000636071.2

SCN2A-209, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-209ENST00000636071 TENM2Q9NT68 2774 aa2.88□□□□□ -1.95
SCN2A-209ENST00000636071 ZFHX3Q15911 3703 aa2.88□□□□□ -1.95
SCN2A-209ENST00000636071 LRBAP50851 2863 aa2.87□□□□□ -1.95
SCN2A-209ENST00000636071 DNAH12Q6ZR08 3092 aa2.86□□□□□ -1.95
SCN2A-209ENST00000636071 NF1P21359 2839 aa2.85□□□□□ -1.95
SCN2A-209ENST00000636071 KRTAP12-3P60328 96 aa2.85□□□□□ -1.95
SCN2A-209ENST00000636071 EP400Q96L91 3159 aa2.84□□□□□ -1.95
SCN2A-209ENST00000636071 A0A0C4DFX4 3053 aa2.84□□□□□ -1.96
SCN2A-209ENST00000636071 C5orf42Q9H799 3197 aa2.83□□□□□ -1.96
SCN2A-209ENST00000636071 PDZD2O15018 2839 aa2.82□□□□□ -1.96
SCN2A-209ENST00000636071 SRCAPQ6ZRS2 3230 aa2.81□□□□□ -1.96
SCN2A-209ENST00000636071 LAMA1P25391 3075 aa2.8□□□□□ -1.96
SCN2A-209ENST00000636071 TRANK1O15050 2925 aa2.8□□□□□ -1.96
SCN2A-209ENST00000636071 PCNTO95613 3336 aa2.8□□□□□ -1.96
SCN2A-209ENST00000636071 KRTAP3-2Q9BYR7 98 aa2.79□□□□□ -1.96
SCN2A-209ENST00000636071 GOLGB1Q14789 3259 aaKnown RBP2.77□□□□□ -1.97
SCN2A-209ENST00000636071 OTOGQ6ZRI0 2925 aa2.74□□□□□ -1.97
SCN2A-209ENST00000636071 HRNRQ86YZ3 2850 aaPredicted RBP2.73□□□□□ -1.97
SCN2A-209ENST00000636071 KRTAP3-3Q9BYR6 98 aa2.73□□□□□ -1.97
SCN2A-209ENST00000636071 LAMA2P24043 3122 aaKnown RBP2.72□□□□□ -1.97
SCN2A-209ENST00000636071 CELSR2Q9HCU4 2923 aa2.72□□□□□ -1.97
SCN2A-209ENST00000636071 FRYQ5TBA9 3013 aa2.7□□□□□ -1.98
SCN2A-209ENST00000636071 MXRA5Q9NR99 2828 aa2.7□□□□□ -1.98
SCN2A-209ENST00000636071 DCHS2Q6V1P9 2916 aa2.7□□□□□ -1.98
SCN2A-209ENST00000636071 ZANQ9Y493 2812 aa2.69□□□□□ -1.98
SCN2A-209ENST00000636071 FRYLO94915 3013 aa2.69□□□□□ -1.98
SCN2A-209ENST00000636071 TRIOO75962 3097 aa2.69□□□□□ -1.98
SCN2A-209ENST00000636071 CEP350Q5VT06 3117 aa2.67□□□□□ -1.98
SCN2A-209ENST00000636071 MT1HL1P0DM35 61 aa2.66□□□□□ -1.98
SCN2A-209ENST00000636071 UTRNP46939 3433 aa2.66□□□□□ -1.98
SCN2A-209ENST00000636071 MEGF8Q7Z7M0 2845 aa2.65□□□□□ -1.98
SCN2A-209ENST00000636071 PRUNE2Q8WUY3 3088 aa2.65□□□□□ -1.98
SCN2A-209ENST00000636071 FBN3Q75N90 2809 aa2.65□□□□□ -1.99
SCN2A-209ENST00000636071 CRYBG3Q68DQ2 2970 aa2.65□□□□□ -1.99
SCN2A-209ENST00000636071 LCE3AQ5TA76 89 aa2.64□□□□□ -1.99
SCN2A-209ENST00000636071 VPS13AQ96RL7 3174 aa2.63□□□□□ -1.99
SCN2A-209ENST00000636071 TACC2O95359 2948 aa2.63□□□□□ -1.99
SCN2A-209ENST00000636071 ASH1LQ9NR48 2969 aaKnown RBP2.63□□□□□ -1.99
SCN2A-209ENST00000636071 TNRC18O15417 2968 aaPredicted RBP2.61□□□□□ -1.99
SCN2A-209ENST00000636071 KRTAP8-1Q8IUC2 63 aa2.61□□□□□ -1.99
SCN2A-209ENST00000636071 COL12A1Q99715 3063 aa2.61□□□□□ -1.99
SCN2A-209ENST00000636071 DMXL2Q8TDJ6 3036 aa2.61□□□□□ -1.99
SCN2A-209ENST00000636071 CFAP54Q96N23 3096 aa2.6□□□□□ -1.99
SCN2A-209ENST00000636071 KRTAP10-5P60370 271 aa2.6□□□□□ -1.99
SCN2A-209ENST00000636071 NBEAQ8NFP9 2946 aa2.57□□□□□ -2
SCN2A-209ENST00000636071 PKD1L1Q8TDX9 2849 aa2.56□□□□□ -2
SCN2A-209ENST00000636071 RANBP2P49792 3224 aaKnown RBP2.56□□□□□ -2
SCN2A-209ENST00000636071 CRCT1Q9UGL9 99 aa2.56□□□□□ -2
SCN2A-209ENST00000636071 KRTAP10-4P60372 401 aaPredicted RBP2.56□□□□□ -2
SCN2A-209ENST00000636071 ADGRG4Q8IZF6 3080 aa2.54□□□□□ -2
SCN2A-209ENST00000636071 ZZEF1O43149 2961 aa2.54□□□□□ -2
SCN2A-209ENST00000636071 SPRR2GQ9BYE4 73 aa2.53□□□□□ -2
SCN2A-209ENST00000636071 VWFP04275 2813 aa2.52□□□□□ -2.01
SCN2A-209ENST00000636071 KRTAP10-7P60409 375 aaPredicted RBP2.52□□□□□ -2.01
SCN2A-209ENST00000636071 DMXL1Q9Y485 3027 aa2.51□□□□□ -2.01
SCN2A-209ENST00000636071 USP34Q70CQ2 3546 aa2.49□□□□□ -2.01
SCN2A-209ENST00000636071 REV3LO60673 3130 aa2.49□□□□□ -2.01
SCN2A-209ENST00000636071 XIRP2A4UGR9 3374 aa2.48□□□□□ -2.01
SCN2A-209ENST00000636071 LORP23490 312 aaPredicted RBP2.48□□□□□ -2.01
SCN2A-209ENST00000636071 HUWE1Q7Z6Z7 4374 aaKnown RBP2.48□□□□□ -2.01
SCN2A-209ENST00000636071 LCE3CQ5T5A8 94 aa2.47□□□□□ -2.01
SCN2A-209ENST00000636071 CELSR1Q9NYQ6 3014 aa2.47□□□□□ -2.01
SCN2A-209ENST00000636071 BRCA2P51587 3418 aa2.47□□□□□ -2.01
SCN2A-209ENST00000636071 HTTP42858 3142 aa2.46□□□□□ -2.02
SCN2A-209ENST00000636071 LAMA3Q16787 3333 aa2.45□□□□□ -2.02
SCN2A-209ENST00000636071 DNAH14Q0VDD8 3507 aa2.44□□□□□ -2.02
SCN2A-209ENST00000636071 MT3P25713 68 aa2.44□□□□□ -2.02
SCN2A-209ENST00000636071 FBN2P35556 2912 aa2.44□□□□□ -2.02
SCN2A-209ENST00000636071 WDFY4Q6ZS81 3184 aa2.43□□□□□ -2.02
SCN2A-209ENST00000636071 BOD1L1Q8NFC6 3051 aa2.43□□□□□ -2.02
SCN2A-209ENST00000636071 COL7A1Q02388 2944 aa2.43□□□□□ -2.02
SCN2A-209ENST00000636071 FREM2Q5SZK8 3169 aa2.43□□□□□ -2.02
SCN2A-209ENST00000636071 ATMQ13315 3056 aa2.43□□□□□ -2.02
SCN2A-209ENST00000636071 MKI67P46013 3256 aaKnown RBP2.41□□□□□ -2.02
SCN2A-209ENST00000636071 KRTAP17-1Q9BYP8 105 aa2.37□□□□□ -2.03
SCN2A-209ENST00000636071 ALMS1Q8TCU4 4167 aa2.37□□□□□ -2.03
SCN2A-209ENST00000636071 FBN1P35555 2871 aaKnown RBP2.37□□□□□ -2.03
SCN2A-209ENST00000636071 SPTBN5Q9NRC6 3674 aaKnown RBP2.36□□□□□ -2.03
SCN2A-209ENST00000636071 CDH23Q9H251 3354 aa2.36□□□□□ -2.03
SCN2A-209ENST00000636071 WDFY3Q8IZQ1 3526 aa2.34□□□□□ -2.03
SCN2A-209ENST00000636071 COL6A3P12111 3177 aa2.34□□□□□ -2.03
SCN2A-209ENST00000636071 MT2AP02795 61 aa2.34□□□□□ -2.03
SCN2A-209ENST00000636071 SPENQ96T58 3664 aaKnown RBP2.34□□□□□ -2.04
SCN2A-209ENST00000636071 KRTAP19-5Q3LI72 72 aa2.33□□□□□ -2.04
SCN2A-209ENST00000636071 MYO15AQ9UKN7 3530 aa2.33□□□□□ -2.04
SCN2A-209ENST00000636071 MT1HP80294 61 aa2.33□□□□□ -2.04
SCN2A-209ENST00000636071 SPRR5A0A1B0GTR4 108 aa2.33□□□□□ -2.04
SCN2A-209ENST00000636071 KRTAP19-8Q3LI54 63 aa2.33□□□□□ -2.04
SCN2A-209ENST00000636071 VCANP13611 3396 aa2.33□□□□□ -2.04
SCN2A-209ENST00000636071 SZT2Q5T011 3432 aa2.32□□□□□ -2.04
SCN2A-209ENST00000636071 KRTAP12-4P60329 112 aa2.32□□□□□ -2.04
SCN2A-209ENST00000636071 SPRR2FQ96RM1 72 aa2.3□□□□□ -2.04
SCN2A-209ENST00000636071 EYSQ5T1H1 3165 aa2.3□□□□□ -2.04
SCN2A-209ENST00000636071 UNC80Q8N2C7 3258 aa2.3□□□□□ -2.04
SCN2A-209ENST00000636071 CELSR3Q9NYQ7 3312 aa2.29□□□□□ -2.04
SCN2A-209ENST00000636071 CFAP47Q6ZTR5 3102 aa2.27□□□□□ -2.05
SCN2A-209ENST00000636071 MT1GP13640 62 aa2.26□□□□□ -2.05
SCN2A-209ENST00000636071 LAMA5O15230 3695 aa2.26□□□□□ -2.05
SCN2A-209ENST00000636071 NBPF19A0A087WUL8 3843 aa2.26□□□□□ -2.05
SCN2A-209ENST00000636071 LOC400499M0QZD8 3231 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms