RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 LINC00313P59037 77 aa10.22□□□□□ -0.77
MECP2-216ENST00000627864 UBL5Q9BZL1 73 aa10.22□□□□□ -0.77
MECP2-216ENST00000627864 A8MWP4 228 aa10.2□□□□□ -0.78
MECP2-216ENST00000627864 BPY2O14599 106 aa10.2□□□□□ -0.78
MECP2-216ENST00000627864 NOTCH2NLQ7Z3S9 236 aa10.19□□□□□ -0.78
MECP2-216ENST00000627864 IGKV3D-7A0A0C4DH55 119 aa10.17□□□□□ -0.78
MECP2-216ENST00000627864 C8orf87E5RJ46 101 aa10.17□□□□□ -0.78
MECP2-216ENST00000627864 SEC61BP60468 96 aaKnown RBP10.17□□□□□ -0.78
MECP2-216ENST00000627864 ACYP1P07311 99 aa10.15□□□□□ -0.78
MECP2-216ENST00000627864 RPL37P61927 97 aaKnown RBP10.15□□□□□ -0.78
MECP2-216ENST00000627864 PRR15Q8IV56 129 aa10.14□□□□□ -0.79
MECP2-216ENST00000627864 KRTAP16-1A8MUX0 517 aa10.12□□□□□ -0.79
MECP2-216ENST00000627864 C8orf17Q9NRJ1 99 aa10.12□□□□□ -0.79
MECP2-216ENST00000627864 FAM240AA0A1B0GVK7 77 aa10.11□□□□□ -0.79
MECP2-216ENST00000627864 K7EQZ3 153 aa10.11□□□□□ -0.79
MECP2-216ENST00000627864 PCOTHQ58A44 107 aa10.1□□□□□ -0.79
MECP2-216ENST00000627864 Q75L30 129 aa10.1□□□□□ -0.79
MECP2-216ENST00000627864 A8MUU9 505 aa10.09□□□□□ -0.79
MECP2-216ENST00000627864 C20orf166-AS1Q96NR2 134 aa10.09□□□□□ -0.79
MECP2-216ENST00000627864 UBR4Q5T4S7 5183 aa10.08□□□□□ -0.8
MECP2-216ENST00000627864 Q8N9L7 120 aa10.08□□□□□ -0.8
MECP2-216ENST00000627864 MMP24-AS1A0A0U1RRL7 71 aa10.04□□□□□ -0.8
MECP2-216ENST00000627864 J3QR89 54 aa10.04□□□□□ -0.8
MECP2-216ENST00000627864 ATP11AUNQ6ZP68 121 aa10.04□□□□□ -0.8
MECP2-216ENST00000627864 MUC17Q685J3 4493 aa10.02□□□□□ -0.81
MECP2-216ENST00000627864 CXCL6P80162 114 aa10.02□□□□□ -0.81
MECP2-216ENST00000627864 KRTAP4-1Q9BYQ7 146 aa9.99□□□□□ -0.81
MECP2-216ENST00000627864 hDV103S1A0JD37 113 aa9.98□□□□□ -0.81
MECP2-216ENST00000627864 TMEM254Q8TBM7 123 aa9.98□□□□□ -0.81
MECP2-216ENST00000627864 WFDC13Q8IUB5 93 aa9.97□□□□□ -0.81
MECP2-216ENST00000627864 MRPL34Q9BQ48 92 aaKnown RBP9.97□□□□□ -0.81
MECP2-216ENST00000627864 Q8N9P0 234 aaPredicted RBP9.96□□□□□ -0.82
MECP2-216ENST00000627864 CASC2Q6XLA1 102 aa9.95□□□□□ -0.82
MECP2-216ENST00000627864 RNF213Q63HN8 5207 aa9.95□□□□□ -0.82
MECP2-216ENST00000627864 LINC00643Q86TS7 51 aa9.94□□□□□ -0.82
MECP2-216ENST00000627864 ATP5EP2Q5VTU8 51 aa9.93□□□□□ -0.82
MECP2-216ENST00000627864 HCG22E2RYF7 251 aa9.91□□□□□ -0.82
MECP2-216ENST00000627864 NDUFS5O43920 106 aa9.9□□□□□ -0.82
MECP2-216ENST00000627864 K7ERU9 68 aa9.88□□□□□ -0.83
MECP2-216ENST00000627864 ZCCHC13Q8WW36 166 aaKnown RBP9.88□□□□□ -0.83
MECP2-216ENST00000627864 HIST1H4AP62805 103 aaKnown RBP9.86□□□□□ -0.83
MECP2-216ENST00000627864 A0A0U1RQV1 116 aa9.78□□□□□ -0.84
MECP2-216ENST00000627864 A0A087WVE0 104 aa9.76□□□□□ -0.85
MECP2-216ENST00000627864 MUC2Q02817 5179 aa9.75□□□□□ -0.85
MECP2-216ENST00000627864 Q5W150 140 aa9.73□□□□□ -0.85
MECP2-216ENST00000627864 SPINK7P58062 85 aa9.7□□□□□ -0.86
MECP2-216ENST00000627864 TP53AIP1Q9HCN2 124 aa9.7□□□□□ -0.86
MECP2-216ENST00000627864 MT-ATP8P03928 68 aa9.66□□□□□ -0.86
MECP2-216ENST00000627864 KRTAP19-2Q3LHN2 52 aa9.65□□□□□ -0.86
MECP2-216ENST00000627864 HRES1P13985 223 aa9.63□□□□□ -0.87
MECP2-216ENST00000627864 COX6B2Q6YFQ2 88 aa9.63□□□□□ -0.87
MECP2-216ENST00000627864 IGKV2D-30A0A075B6S6 120 aa9.62□□□□□ -0.87
MECP2-216ENST00000627864 IGKV2-30P06310 120 aa9.62□□□□□ -0.87
MECP2-216ENST00000627864 LCE2CQ5TA81 110 aa9.61□□□□□ -0.87
MECP2-216ENST00000627864 IMUPQ9GZP8 106 aa9.61□□□□□ -0.87
MECP2-216ENST00000627864 C7orf65Q6ZTY9 151 aa9.58□□□□□ -0.88
MECP2-216ENST00000627864 RBM12B-AS1Q9P1G2 102 aa9.57□□□□□ -0.88
MECP2-216ENST00000627864 UQCRQO14949 82 aa9.56□□□□□ -0.88
MECP2-216ENST00000627864 MPLKIPQ8TAP9 179 aa9.55□□□□□ -0.88
MECP2-216ENST00000627864 FAT4Q6V0I7 4981 aa9.55□□□□□ -0.88
MECP2-216ENST00000627864 TRAV22A0A0B4J277 110 aa9.54□□□□□ -0.88
MECP2-216ENST00000627864 FAM236DA0A1B0GTK5 79 aa9.54□□□□□ -0.88
MECP2-216ENST00000627864 FAM236CP0DP71 79 aa9.54□□□□□ -0.88
MECP2-216ENST00000627864 SCGB1A1P11684 91 aa9.53□□□□□ -0.88
MECP2-216ENST00000627864 OCR1Q9BZK8 76 aa9.51□□□□□ -0.89
MECP2-216ENST00000627864 H0Y9P7 68 aa9.49□□□□□ -0.89
MECP2-216ENST00000627864 LCE2AQ5TA79 106 aaPredicted RBP9.49□□□□□ -0.89
MECP2-216ENST00000627864 FAM236AA0A1B0GUQ0 79 aa9.46□□□□□ -0.9
MECP2-216ENST00000627864 FAM236BA0A1B0GV22 79 aa9.46□□□□□ -0.9
MECP2-216ENST00000627864 MT1HP80294 61 aa9.46□□□□□ -0.9
MECP2-216ENST00000627864 ATOX1O00244 68 aa9.44□□□□□ -0.9
MECP2-216ENST00000627864 LOC101927531A0A1B0GV80 90 aa9.43□□□□□ -0.9
MECP2-216ENST00000627864 CYP4F30PQ9H0H9 118 aa9.42□□□□□ -0.9
MECP2-216ENST00000627864 MP68P56378 58 aa9.4□□□□□ -0.9
MECP2-216ENST00000627864 C4orf26Q17RF5 130 aa9.4□□□□□ -0.9
MECP2-216ENST00000627864 C5orf47Q569G3 176 aa9.4□□□□□ -0.9
MECP2-216ENST00000627864 LINC00208Q96KT6 92 aa9.39□□□□□ -0.91
MECP2-216ENST00000627864 C1orf64Q8NEQ6 169 aa9.38□□□□□ -0.91
MECP2-216ENST00000627864 M0R2T5 61 aa9.37□□□□□ -0.91
MECP2-216ENST00000627864 SMIM20Q8N5G0 67 aa9.36□□□□□ -0.91
MECP2-216ENST00000627864 TRAV7A0A075B6U4 112 aa9.33□□□□□ -0.92
MECP2-216ENST00000627864 FLGP20930 4061 aaPredicted RBP9.31□□□□□ -0.92
MECP2-216ENST00000627864 H3BPC8 53 aa9.3□□□□□ -0.92
MECP2-216ENST00000627864 H1FX-AS1Q4G0G2 97 aa9.3□□□□□ -0.92
MECP2-216ENST00000627864 KLKP1Q107X0 134 aa9.25□□□□□ -0.93
MECP2-216ENST00000627864 KRTAP3-1Q9BYR8 98 aa9.25□□□□□ -0.93
MECP2-216ENST00000627864 KRTAP10-6P60371 365 aaPredicted RBP9.21□□□□□ -0.94
MECP2-216ENST00000627864 SERP2Q8N6R1 65 aa9.19□□□□□ -0.94
MECP2-216ENST00000627864 LORP23490 312 aaPredicted RBP9.16□□□□□ -0.94
MECP2-216ENST00000627864 SNURFQ9Y675 71 aa9.11□□□□□ -0.95
MECP2-216ENST00000627864 C20orf197Q8N268 126 aa9.1□□□□□ -0.95
MECP2-216ENST00000627864 S4R3F8 94 aa9.1□□□□□ -0.95
MECP2-216ENST00000627864 A8MUN3 132 aa9.05□□□□□ -0.96
MECP2-216ENST00000627864 COX7CP15954 63 aa9.05□□□□□ -0.96
MECP2-216ENST00000627864 LCA10Q71F78 164 aa9.04□□□□□ -0.96
MECP2-216ENST00000627864 KRTAP9-8Q9BYQ0 159 aa9.02□□□□□ -0.97
MECP2-216ENST00000627864 ANAPC13Q9BS18 74 aa9□□□□□ -0.97
MECP2-216ENST00000627864 CSAG1Q6PB30 78 aa8.97□□□□□ -0.97
MECP2-216ENST00000627864 DMAC1Q96GE9 116 aa8.97□□□□□ -0.97
MECP2-216ENST00000627864 MT2AP02795 61 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms