RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 HIST1H4AP62805 103 aaKnown RBP4.39□□□□□ -1.71
PTP4A1-206ENST00000627002 ASB16-AS1Q495Z4 193 aa4.39□□□□□ -1.71
PTP4A1-206ENST00000627002 Q5XG85 94 aa4.39□□□□□ -1.71
PTP4A1-206ENST00000627002 SPAG11AQ6PDA7 123 aa4.39□□□□□ -1.71
PTP4A1-206ENST00000627002 LIMD2Q9BT23 127 aa4.39□□□□□ -1.71
PTP4A1-206ENST00000627002 KRTAP9-3Q9BYQ3 159 aa4.39□□□□□ -1.71
PTP4A1-206ENST00000627002 KRTAP4-11Q9BYQ6 195 aa4.39□□□□□ -1.71
PTP4A1-206ENST00000627002 LINC00472Q9H8W2 130 aa4.39□□□□□ -1.71
PTP4A1-206ENST00000627002 SPINK1P00995 79 aa4.38□□□□□ -1.71
PTP4A1-206ENST00000627002 LINC00304Q8N9R0 145 aa4.38□□□□□ -1.71
PTP4A1-206ENST00000627002 HERC1Q15751 4861 aa4.37□□□□□ -1.71
PTP4A1-206ENST00000627002 RPS29P62273 56 aaKnown RBP4.37□□□□□ -1.71
PTP4A1-206ENST00000627002 IGKV4-1P06312 121 aa4.36□□□□□ -1.71
PTP4A1-206ENST00000627002 DSCR10P59022 87 aa4.36□□□□□ -1.71
PTP4A1-206ENST00000627002 Q96NJ1 140 aa4.36□□□□□ -1.71
PTP4A1-206ENST00000627002 A8MWP4 228 aa4.35□□□□□ -1.71
PTP4A1-206ENST00000627002 NDUFB1O75438 58 aa4.35□□□□□ -1.71
PTP4A1-206ENST00000627002 DEFB116Q30KQ4 102 aa4.35□□□□□ -1.71
PTP4A1-206ENST00000627002 LCE5AQ5TCM9 118 aa4.35□□□□□ -1.71
PTP4A1-206ENST00000627002 DMBT1Q9UGM3 2413 aaPredicted RBP4.34□□□□□ -1.71
PTP4A1-206ENST00000627002 A0A087WVE0 104 aa4.34□□□□□ -1.71
PTP4A1-206ENST00000627002 FAM236AA0A1B0GUQ0 79 aa4.34□□□□□ -1.71
PTP4A1-206ENST00000627002 FAM236BA0A1B0GV22 79 aa4.34□□□□□ -1.71
PTP4A1-206ENST00000627002 K7EQZ3 153 aa4.34□□□□□ -1.71
PTP4A1-206ENST00000627002 Q8N9L7 120 aa4.34□□□□□ -1.71
PTP4A1-206ENST00000627002 KRTAP10-8P60410 259 aa4.33□□□□□ -1.72
PTP4A1-206ENST00000627002 PRR15Q8IV56 129 aa4.33□□□□□ -1.72
PTP4A1-206ENST00000627002 C1orf195Q5TG92 126 aa4.32□□□□□ -1.72
PTP4A1-206ENST00000627002 PKHD1L1Q86WI1 4243 aa4.32□□□□□ -1.72
PTP4A1-206ENST00000627002 A0A1B0GVX0 72 aa4.31□□□□□ -1.72
PTP4A1-206ENST00000627002 ATOX1O00244 68 aa4.31□□□□□ -1.72
PTP4A1-206ENST00000627002 HCG22E2RYF7 251 aa4.3□□□□□ -1.72
PTP4A1-206ENST00000627002 OXTP01178 125 aa4.3□□□□□ -1.72
PTP4A1-206ENST00000627002 SMIM20Q8N5G0 67 aa4.29□□□□□ -1.72
PTP4A1-206ENST00000627002 FAT1Q14517 4588 aa4.28□□□□□ -1.72
PTP4A1-206ENST00000627002 IGHV6-1A0A0B4J1U7 121 aa4.28□□□□□ -1.72
PTP4A1-206ENST00000627002 KRTAP29-1A8MX34 341 aaPredicted RBP4.28□□□□□ -1.72
PTP4A1-206ENST00000627002 C8orf87E5RJ46 101 aa4.28□□□□□ -1.72
PTP4A1-206ENST00000627002 CASC2Q6XLA1 102 aa4.28□□□□□ -1.72
PTP4A1-206ENST00000627002 ANAPC13Q9BS18 74 aa4.28□□□□□ -1.72
PTP4A1-206ENST00000627002 C8orf17Q9NRJ1 99 aa4.28□□□□□ -1.72
PTP4A1-206ENST00000627002 MMP24-AS1A0A0U1RRL7 71 aa4.27□□□□□ -1.73
PTP4A1-206ENST00000627002 hDV103S1A0JD37 113 aa4.26□□□□□ -1.73
PTP4A1-206ENST00000627002 PCP4P48539 62 aa4.26□□□□□ -1.73
PTP4A1-206ENST00000627002 WFDC13Q8IUB5 93 aa4.26□□□□□ -1.73
PTP4A1-206ENST00000627002 MT1HL1P0DM35 61 aa4.25□□□□□ -1.73
PTP4A1-206ENST00000627002 LINC00313P59037 77 aa4.25□□□□□ -1.73
PTP4A1-206ENST00000627002 TRAV7A0A075B6U4 112 aa4.24□□□□□ -1.73
PTP4A1-206ENST00000627002 SERP2Q8N6R1 65 aa4.24□□□□□ -1.73
PTP4A1-206ENST00000627002 TMEM254Q8TBM7 123 aa4.24□□□□□ -1.73
PTP4A1-206ENST00000627002 FLG2Q5D862 2391 aaPredicted RBP4.24□□□□□ -1.73
PTP4A1-206ENST00000627002 UBR4Q5T4S7 5183 aa4.24□□□□□ -1.73
PTP4A1-206ENST00000627002 MYCBP2O75592 4640 aa4.22□□□□□ -1.73
PTP4A1-206ENST00000627002 COX7CP15954 63 aa4.22□□□□□ -1.73
PTP4A1-206ENST00000627002 FP248Q71RG6 208 aaPredicted RBP4.22□□□□□ -1.73
PTP4A1-206ENST00000627002 MRPL34Q9BQ48 92 aaKnown RBP4.22□□□□□ -1.73
PTP4A1-206ENST00000627002 OCR1Q9BZK8 76 aa4.22□□□□□ -1.73
PTP4A1-206ENST00000627002 UQCRQO14949 82 aa4.21□□□□□ -1.74
PTP4A1-206ENST00000627002 NOTCH2NLQ7Z3S9 236 aa4.21□□□□□ -1.74
PTP4A1-206ENST00000627002 TP53AIP1Q9HCN2 124 aa4.21□□□□□ -1.74
PTP4A1-206ENST00000627002 RETNLBQ9BQ08 111 aa4.2□□□□□ -1.74
PTP4A1-206ENST00000627002 KRTAP16-1A8MUX0 517 aa4.18□□□□□ -1.74
PTP4A1-206ENST00000627002 NDUFS5O43920 106 aa4.18□□□□□ -1.74
PTP4A1-206ENST00000627002 C5orf47Q569G3 176 aa4.18□□□□□ -1.74
PTP4A1-206ENST00000627002 Q8N9P0 234 aaPredicted RBP4.18□□□□□ -1.74
PTP4A1-206ENST00000627002 TNXBP22105 4242 aa4.17□□□□□ -1.74
PTP4A1-206ENST00000627002 IGLV7-46A0A075B6I9 117 aa4.16□□□□□ -1.74
PTP4A1-206ENST00000627002 CCDC179H3BU77 68 aa4.16□□□□□ -1.74
PTP4A1-206ENST00000627002 MP68P56378 58 aa4.16□□□□□ -1.74
PTP4A1-206ENST00000627002 TRAV22A0A0B4J277 110 aa4.15□□□□□ -1.75
PTP4A1-206ENST00000627002 C9orf92A6NGG3 77 aa4.15□□□□□ -1.75
PTP4A1-206ENST00000627002 H3BPC8 53 aa4.15□□□□□ -1.75
PTP4A1-206ENST00000627002 C20orf197Q8N268 126 aa4.15□□□□□ -1.75
PTP4A1-206ENST00000627002 FAT3Q8TDW7 4589 aa4.15□□□□□ -1.75
PTP4A1-206ENST00000627002 HMCN2Q8NDA2 5059 aa4.14□□□□□ -1.75
PTP4A1-206ENST00000627002 H0Y9P7 68 aa4.14□□□□□ -1.75
PTP4A1-206ENST00000627002 PRR4Q16378 134 aa4.14□□□□□ -1.75
PTP4A1-206ENST00000627002 LRP1Q07954 4544 aaKnown RBP4.14□□□□□ -1.75
PTP4A1-206ENST00000627002 A0A0U1RQV1 116 aa4.13□□□□□ -1.75
PTP4A1-206ENST00000627002 KLKP1Q107X0 134 aa4.13□□□□□ -1.75
PTP4A1-206ENST00000627002 KRTAP5-3Q6L8H2 238 aa4.13□□□□□ -1.75
PTP4A1-206ENST00000627002 C20orf166-AS1Q96NR2 134 aa4.13□□□□□ -1.75
PTP4A1-206ENST00000627002 KRTAP3-1Q9BYR8 98 aa4.13□□□□□ -1.75
PTP4A1-206ENST00000627002 A8MUU9 505 aa4.12□□□□□ -1.75
PTP4A1-206ENST00000627002 NDUFC1O43677 76 aa4.11□□□□□ -1.75
PTP4A1-206ENST00000627002 KRTAP13-3Q3SY46 172 aa4.11□□□□□ -1.75
PTP4A1-206ENST00000627002 Q75L30 129 aa4.11□□□□□ -1.75
PTP4A1-206ENST00000627002 KRTAP9-8Q9BYQ0 159 aa4.11□□□□□ -1.75
PTP4A1-206ENST00000627002 TPRXLQ17RH7 258 aa4.1□□□□□ -1.75
PTP4A1-206ENST00000627002 C1orf64Q8NEQ6 169 aa4.1□□□□□ -1.75
PTP4A1-206ENST00000627002 LINC00208Q96KT6 92 aa4.1□□□□□ -1.75
PTP4A1-206ENST00000627002 SNURFQ9Y675 71 aa4.1□□□□□ -1.75
PTP4A1-206ENST00000627002 LOC101927531A0A1B0GV80 90 aa4.09□□□□□ -1.75
PTP4A1-206ENST00000627002 Q5W150 140 aa4.09□□□□□ -1.75
PTP4A1-206ENST00000627002 ZCCHC13Q8WW36 166 aaKnown RBP4.09□□□□□ -1.75
PTP4A1-206ENST00000627002 H7BZZ5 65 aa4.06□□□□□ -1.76
PTP4A1-206ENST00000627002 RPL37P61927 97 aaKnown RBP4.06□□□□□ -1.76
PTP4A1-206ENST00000627002 CYSTM1Q9H1C7 97 aa4.06□□□□□ -1.76
PTP4A1-206ENST00000627002 TMEM258P61165 79 aa4.05□□□□□ -1.76
PTP4A1-206ENST00000627002 ATP11AUNQ6ZP68 121 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms