RNA–Protein interactions for RNA: ENST00000623391.1

AP000542.3-201, humanhuman

BASIC

Gene AP000542.3, Length 6,114 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000542.3-201ENST00000623391 NOTCH1P46531 2555 aa4.51□□□□□ -1.69
AP000542.3-201ENST00000623391 FLNCQ14315 2725 aa4.5□□□□□ -1.69
AP000542.3-201ENST00000623391 LRBAP50851 2863 aa4.49□□□□□ -1.69
AP000542.3-201ENST00000623391 PRO2289Q9P1D8 64 aa4.48□□□□□ -1.69
AP000542.3-201ENST00000623391 VPS13AQ96RL7 3174 aa4.47□□□□□ -1.69
AP000542.3-201ENST00000623391 XIRP2A4UGR9 3374 aa4.46□□□□□ -1.7
AP000542.3-201ENST00000623391 LAMA1P25391 3075 aa4.46□□□□□ -1.7
AP000542.3-201ENST00000623391 ATMQ13315 3056 aa4.46□□□□□ -1.7
AP000542.3-201ENST00000623391 LAMA2P24043 3122 aaKnown RBP4.45□□□□□ -1.7
AP000542.3-201ENST00000623391 COL6A3P12111 3177 aa4.43□□□□□ -1.7
AP000542.3-201ENST00000623391 NIPBLQ6KC79 2804 aaeCLIP4.42□□□□□ -1.7
AP000542.3-201ENST00000623391 ANK3Q12955 4377 aaKnown RBP4.42□□□□□ -1.7
AP000542.3-201ENST00000623391 DMXL2Q8TDJ6 3036 aa4.41□□□□□ -1.7
AP000542.3-201ENST00000623391 KRTAP10-10P60014 251 aa4.41□□□□□ -1.7
AP000542.3-201ENST00000623391 DMBT1Q9UGM3 2413 aaPredicted RBP4.41□□□□□ -1.7
AP000542.3-201ENST00000623391 ZZEF1O43149 2961 aa4.4□□□□□ -1.7
AP000542.3-201ENST00000623391 P0C880 135 aa4.4□□□□□ -1.7
AP000542.3-201ENST00000623391 KALRNO60229 2985 aa4.4□□□□□ -1.71
AP000542.3-201ENST00000623391 COL12A1Q99715 3063 aa4.39□□□□□ -1.71
AP000542.3-201ENST00000623391 ADGRG4Q8IZF6 3080 aa4.39□□□□□ -1.71
AP000542.3-201ENST00000623391 C10orf95Q9H7T3 257 aa4.39□□□□□ -1.71
AP000542.3-201ENST00000623391 TENM4Q6N022 2769 aa4.38□□□□□ -1.71
AP000542.3-201ENST00000623391 DNAH14Q0VDD8 3507 aa4.37□□□□□ -1.71
AP000542.3-201ENST00000623391 USP34Q70CQ2 3546 aa4.37□□□□□ -1.71
AP000542.3-201ENST00000623391 PDZD2O15018 2839 aa4.37□□□□□ -1.71
AP000542.3-201ENST00000623391 NDUFAF8A1L188 74 aa4.36□□□□□ -1.71
AP000542.3-201ENST00000623391 VCANP13611 3396 aa4.36□□□□□ -1.71
AP000542.3-201ENST00000623391 REV3LO60673 3130 aa4.35□□□□□ -1.71
AP000542.3-201ENST00000623391 ALMS1Q8TCU4 4167 aa4.35□□□□□ -1.71
AP000542.3-201ENST00000623391 STAB2Q8WWQ8 2551 aa4.33□□□□□ -1.72
AP000542.3-201ENST00000623391 FRYLO94915 3013 aa4.33□□□□□ -1.72
AP000542.3-201ENST00000623391 FBN2P35556 2912 aa4.32□□□□□ -1.72
AP000542.3-201ENST00000623391 NBEAQ8NFP9 2946 aa4.31□□□□□ -1.72
AP000542.3-201ENST00000623391 DMXL1Q9Y485 3027 aa4.31□□□□□ -1.72
AP000542.3-201ENST00000623391 KRTAP3-1Q9BYR8 98 aa4.3□□□□□ -1.72
AP000542.3-201ENST00000623391 BOD1L1Q8NFC6 3051 aa4.3□□□□□ -1.72
AP000542.3-201ENST00000623391 KRTAP13-4Q3LI77 160 aa4.3□□□□□ -1.72
AP000542.3-201ENST00000623391 CELSR3Q9NYQ7 3312 aa4.3□□□□□ -1.72
AP000542.3-201ENST00000623391 KRTAP12-2P59991 146 aa4.27□□□□□ -1.73
AP000542.3-201ENST00000623391 KRTAP12-1P59990 96 aa4.25□□□□□ -1.73
AP000542.3-201ENST00000623391 TACC2O95359 2948 aa4.23□□□□□ -1.73
AP000542.3-201ENST00000623391 MT1HL1P0DM35 61 aa4.23□□□□□ -1.73
AP000542.3-201ENST00000623391 ZANQ9Y493 2812 aa4.23□□□□□ -1.73
AP000542.3-201ENST00000623391 KRTAP10-4P60372 401 aaPredicted RBP4.22□□□□□ -1.73
AP000542.3-201ENST00000623391 FREM2Q5SZK8 3169 aa4.22□□□□□ -1.73
AP000542.3-201ENST00000623391 HUWE1Q7Z6Z7 4374 aaKnown RBP4.21□□□□□ -1.73
AP000542.3-201ENST00000623391 KRTAP10-6P60371 365 aaPredicted RBP4.18□□□□□ -1.74
AP000542.3-201ENST00000623391 CELSR2Q9HCU4 2923 aa4.17□□□□□ -1.74
AP000542.3-201ENST00000623391 DCHS2Q6V1P9 2916 aa4.16□□□□□ -1.74
AP000542.3-201ENST00000623391 MXRA5Q9NR99 2828 aa4.14□□□□□ -1.75
AP000542.3-201ENST00000623391 TENM2Q9NT68 2774 aa4.11□□□□□ -1.75
AP000542.3-201ENST00000623391 OTOGQ6ZRI0 2925 aa4.11□□□□□ -1.75
AP000542.3-201ENST00000623391 TENM3Q9P273 2699 aa4.11□□□□□ -1.75
AP000542.3-201ENST00000623391 FLG2Q5D862 2391 aaPredicted RBP4.11□□□□□ -1.75
AP000542.3-201ENST00000623391 NF1P21359 2839 aa4.1□□□□□ -1.75
AP000542.3-201ENST00000623391 LOC400499M0QZD8 3231 aa4.1□□□□□ -1.75
AP000542.3-201ENST00000623391 CELSR1Q9NYQ6 3014 aa4.09□□□□□ -1.75
AP000542.3-201ENST00000623391 CRYBG3Q68DQ2 2970 aa4.09□□□□□ -1.76
AP000542.3-201ENST00000623391 ASH1LQ9NR48 2969 aaKnown RBP4.08□□□□□ -1.76
AP000542.3-201ENST00000623391 KRTAP3-3Q9BYR6 98 aa4.07□□□□□ -1.76
AP000542.3-201ENST00000623391 KRTAP3-2Q9BYR7 98 aa4.06□□□□□ -1.76
AP000542.3-201ENST00000623391 KRTAP23-1A1A580 65 aa4.05□□□□□ -1.76
AP000542.3-201ENST00000623391 CFAP47Q6ZTR5 3102 aa4.02□□□□□ -1.77
AP000542.3-201ENST00000623391 TGP01266 2768 aa4.02□□□□□ -1.77
AP000542.3-201ENST00000623391 MYO15AQ9UKN7 3530 aa4□□□□□ -1.77
AP000542.3-201ENST00000623391 DNAH2Q9P225 4427 aa4□□□□□ -1.77
AP000542.3-201ENST00000623391 BSNQ9UPA5 3926 aa4□□□□□ -1.77
AP000542.3-201ENST00000623391 NBPF19A0A087WUL8 3843 aa3.99□□□□□ -1.77
AP000542.3-201ENST00000623391 KRTAP15-1Q3LI76 137 aa3.97□□□□□ -1.77
AP000542.3-201ENST00000623391 DNAH9Q9NYC9 4486 aa3.97□□□□□ -1.77
AP000542.3-201ENST00000623391 SPEGQ15772 3267 aa3.97□□□□□ -1.77
AP000542.3-201ENST00000623391 TENM1Q9UKZ4 2725 aa3.96□□□□□ -1.77
AP000542.3-201ENST00000623391 FBN1P35555 2871 aaKnown RBP3.96□□□□□ -1.78
AP000542.3-201ENST00000623391 DNAH10Q8IVF4 4471 aa3.94□□□□□ -1.78
AP000542.3-201ENST00000623391 DNAH1Q9P2D7 4330 aa3.93□□□□□ -1.78
AP000542.3-201ENST00000623391 RELNP78509 3460 aa3.93□□□□□ -1.78
AP000542.3-201ENST00000623391 KRTAP4-5Q9BYR2 181 aa3.93□□□□□ -1.78
AP000542.3-201ENST00000623391 WDFY3Q8IZQ1 3526 aa3.93□□□□□ -1.78
AP000542.3-201ENST00000623391 ASPMQ8IZT6 3477 aa3.93□□□□□ -1.78
AP000542.3-201ENST00000623391 VWFP04275 2813 aa3.92□□□□□ -1.78
AP000542.3-201ENST00000623391 AKAP9Q99996 3911 aa3.91□□□□□ -1.78
AP000542.3-201ENST00000623391 KRTAP10-12P60413 245 aa3.91□□□□□ -1.78
AP000542.3-201ENST00000623391 DNAH6Q9C0G6 4158 aa3.88□□□□□ -1.79
AP000542.3-201ENST00000623391 DNAH17Q9UFH2 4485 aa3.86□□□□□ -1.79
AP000542.3-201ENST00000623391 DNAH3Q8TD57 4116 aa3.86□□□□□ -1.79
AP000542.3-201ENST00000623391 VPS13DQ5THJ4 4388 aa3.85□□□□□ -1.79
AP000542.3-201ENST00000623391 INE1O15225 51 aa3.83□□□□□ -1.8
AP000542.3-201ENST00000623391 ZFHX4Q86UP3 3567 aa3.82□□□□□ -1.8
AP000542.3-201ENST00000623391 DNAH11Q96DT5 4516 aa3.82□□□□□ -1.8
AP000542.3-201ENST00000623391 DMDP11532 3685 aa3.81□□□□□ -1.8
AP000542.3-201ENST00000623391 DCHS1Q96JQ0 3298 aa3.78□□□□□ -1.8
AP000542.3-201ENST00000623391 LAMA5O15230 3695 aa3.78□□□□□ -1.8
AP000542.3-201ENST00000623391 SMG1Q96Q15 3661 aaKnown RBP3.78□□□□□ -1.8
AP000542.3-201ENST00000623391 KRTAP12-3P60328 96 aa3.77□□□□□ -1.81
AP000542.3-201ENST00000623391 MEGF8Q7Z7M0 2845 aa3.77□□□□□ -1.81
AP000542.3-201ENST00000623391 TRRAPQ9Y4A5 3859 aa3.77□□□□□ -1.81
AP000542.3-201ENST00000623391 CUBNO60494 3623 aa3.76□□□□□ -1.81
AP000542.3-201ENST00000623391 SVEP1Q4LDE5 3571 aa3.76□□□□□ -1.81
AP000542.3-201ENST00000623391 SPENQ96T58 3664 aaKnown RBP3.76□□□□□ -1.81
AP000542.3-201ENST00000623391 DYNC1H1Q14204 4646 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms