RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 CHKB-CPT1BH3BT56 60 aa7.13□□□□□ -1.27
SCAMP1-207ENST00000621999 FAM236DA0A1B0GTK5 79 aa7.12□□□□□ -1.27
SCAMP1-207ENST00000621999 FAM236CP0DP71 79 aa7.12□□□□□ -1.27
SCAMP1-207ENST00000621999 MMP24-AS1A0A0U1RRL7 71 aa7.11□□□□□ -1.27
SCAMP1-207ENST00000621999 DNAH7Q8WXX0 4024 aa7.11□□□□□ -1.27
SCAMP1-207ENST00000621999 DNAH5Q8TE73 4624 aa7.1□□□□□ -1.27
SCAMP1-207ENST00000621999 NOTCH2NLQ7Z3S9 236 aa7.08□□□□□ -1.28
SCAMP1-207ENST00000621999 DYNC2H1Q8NCM8 4307 aaKnown RBP7.08□□□□□ -1.28
SCAMP1-207ENST00000621999 RPS29P62273 56 aaKnown RBP7.08□□□□□ -1.28
SCAMP1-207ENST00000621999 FP248Q71RG6 208 aaPredicted RBP7.07□□□□□ -1.28
SCAMP1-207ENST00000621999 SACSQ9NZJ4 4579 aa7.06□□□□□ -1.28
SCAMP1-207ENST00000621999 HYDINQ4G0P3 5121 aa7.06□□□□□ -1.28
SCAMP1-207ENST00000621999 ASB16-AS1Q495Z4 193 aa7.05□□□□□ -1.28
SCAMP1-207ENST00000621999 DNAH17Q9UFH2 4485 aa7.05□□□□□ -1.28
SCAMP1-207ENST00000621999 NDUFC1O43677 76 aa7.05□□□□□ -1.28
SCAMP1-207ENST00000621999 Q5XG85 94 aa7.04□□□□□ -1.28
SCAMP1-207ENST00000621999 KMT2CQ8NEZ4 4911 aaKnown RBP7.03□□□□□ -1.28
SCAMP1-207ENST00000621999 KRTAP10-8P60410 259 aa7.02□□□□□ -1.29
SCAMP1-207ENST00000621999 DYNC1H1Q14204 4646 aaKnown RBP7.02□□□□□ -1.29
SCAMP1-207ENST00000621999 LOC101927531A0A1B0GV80 90 aa7.02□□□□□ -1.29
SCAMP1-207ENST00000621999 KRTAP4-5Q9BYR2 181 aa7.02□□□□□ -1.29
SCAMP1-207ENST00000621999 COX6B2Q6YFQ2 88 aa6.99□□□□□ -1.29
SCAMP1-207ENST00000621999 C7orf65Q6ZTY9 151 aa6.99□□□□□ -1.29
SCAMP1-207ENST00000621999 OCR1Q9BZK8 76 aa6.99□□□□□ -1.29
SCAMP1-207ENST00000621999 RYR2Q92736 4967 aa6.99□□□□□ -1.29
SCAMP1-207ENST00000621999 LRP1BQ9NZR2 4599 aa6.99□□□□□ -1.29
SCAMP1-207ENST00000621999 DNAH2Q9P225 4427 aa6.99□□□□□ -1.29
SCAMP1-207ENST00000621999 H3BPC8 53 aa6.99□□□□□ -1.29
SCAMP1-207ENST00000621999 KRTAP10-4P60372 401 aaPredicted RBP6.98□□□□□ -1.29
SCAMP1-207ENST00000621999 ZCCHC13Q8WW36 166 aaKnown RBP6.97□□□□□ -1.29
SCAMP1-207ENST00000621999 KRTAP29-1A8MX34 341 aaPredicted RBP6.97□□□□□ -1.29
SCAMP1-207ENST00000621999 FAT1Q14517 4588 aa6.96□□□□□ -1.3
SCAMP1-207ENST00000621999 KIAA1109Q2LD37 5005 aa6.95□□□□□ -1.3
SCAMP1-207ENST00000621999 SEC61BP60468 96 aaKnown RBP6.94□□□□□ -1.3
SCAMP1-207ENST00000621999 TMEM258P61165 79 aa6.93□□□□□ -1.3
SCAMP1-207ENST00000621999 RYR3Q15413 4870 aa6.91□□□□□ -1.3
SCAMP1-207ENST00000621999 SPINK7P58062 85 aa6.9□□□□□ -1.3
SCAMP1-207ENST00000621999 C4orf26Q17RF5 130 aa6.89□□□□□ -1.31
SCAMP1-207ENST00000621999 Q5W150 140 aa6.89□□□□□ -1.31
SCAMP1-207ENST00000621999 Q8N9P0 234 aaPredicted RBP6.89□□□□□ -1.31
SCAMP1-207ENST00000621999 RBM12B-AS1Q9P1G2 102 aa6.89□□□□□ -1.31
SCAMP1-207ENST00000621999 ATP5EP56381 51 aaPredicted RBP6.87□□□□□ -1.31
SCAMP1-207ENST00000621999 A0A0U1RQV1 116 aa6.86□□□□□ -1.31
SCAMP1-207ENST00000621999 KLKP1Q107X0 134 aa6.86□□□□□ -1.31
SCAMP1-207ENST00000621999 DNAH6Q9C0G6 4158 aa6.86□□□□□ -1.31
SCAMP1-207ENST00000621999 ACYP2P14621 99 aa6.85□□□□□ -1.31
SCAMP1-207ENST00000621999 SEC61GP60059 68 aa6.85□□□□□ -1.31
SCAMP1-207ENST00000621999 MT1HL1P0DM35 61 aa6.84□□□□□ -1.31
SCAMP1-207ENST00000621999 CYP4F30PQ9H0H9 118 aa6.83□□□□□ -1.32
SCAMP1-207ENST00000621999 MPLKIPQ8TAP9 179 aa6.83□□□□□ -1.32
SCAMP1-207ENST00000621999 PKHD1P08F94 4074 aa6.82□□□□□ -1.32
SCAMP1-207ENST00000621999 SPTSSBQ8NFR3 76 aa6.82□□□□□ -1.32
SCAMP1-207ENST00000621999 FAT2Q9NYQ8 4349 aa6.81□□□□□ -1.32
SCAMP1-207ENST00000621999 HRES1P13985 223 aa6.81□□□□□ -1.32
SCAMP1-207ENST00000621999 Q75L30 129 aa6.81□□□□□ -1.32
SCAMP1-207ENST00000621999 XP32Q5T750 250 aa6.81□□□□□ -1.32
SCAMP1-207ENST00000621999 RPL37P61927 97 aaKnown RBP6.8□□□□□ -1.32
SCAMP1-207ENST00000621999 H7BZZ5 65 aa6.79□□□□□ -1.32
SCAMP1-207ENST00000621999 HECTD4Q9Y4D8 3996 aa6.78□□□□□ -1.32
SCAMP1-207ENST00000621999 RYR1P21817 5038 aa6.78□□□□□ -1.32
SCAMP1-207ENST00000621999 KRTAP13-3Q3SY46 172 aa6.77□□□□□ -1.33
SCAMP1-207ENST00000621999 TPRXLQ17RH7 258 aa6.77□□□□□ -1.33
SCAMP1-207ENST00000621999 A8MUU9 505 aa6.77□□□□□ -1.33
SCAMP1-207ENST00000621999 C20orf166-AS1Q96NR2 134 aa6.76□□□□□ -1.33
SCAMP1-207ENST00000621999 APOBP04114 4563 aaKnown RBP6.76□□□□□ -1.33
SCAMP1-207ENST00000621999 SERP1Q9Y6X1 66 aa6.75□□□□□ -1.33
SCAMP1-207ENST00000621999 KRTAP17-1Q9BYP8 105 aa6.74□□□□□ -1.33
SCAMP1-207ENST00000621999 FRAS1Q86XX4 4008 aa6.73□□□□□ -1.33
SCAMP1-207ENST00000621999 CYSTM1Q9H1C7 97 aa6.72□□□□□ -1.33
SCAMP1-207ENST00000621999 M0R2T5 61 aa6.71□□□□□ -1.33
SCAMP1-207ENST00000621999 COA5Q86WW8 74 aa6.71□□□□□ -1.34
SCAMP1-207ENST00000621999 DNAH8Q96JB1 4490 aa6.71□□□□□ -1.34
SCAMP1-207ENST00000621999 KRTAP16-1A8MUX0 517 aa6.71□□□□□ -1.34
SCAMP1-207ENST00000621999 VPS13BQ7Z7G8 4022 aa6.7□□□□□ -1.34
SCAMP1-207ENST00000621999 PKD1P98161 4303 aa6.7□□□□□ -1.34
SCAMP1-207ENST00000621999 EPPK1P58107 5090 aaKnown RBP6.68□□□□□ -1.34
SCAMP1-207ENST00000621999 SPANXA2-OT1Q8N9U9 137 aa6.68□□□□□ -1.34
SCAMP1-207ENST00000621999 PRR15LQ9BU68 103 aa6.66□□□□□ -1.34
SCAMP1-207ENST00000621999 SMIM26A0A096LP01 95 aa6.65□□□□□ -1.34
SCAMP1-207ENST00000621999 V9GYY9 64 aa6.62□□□□□ -1.35
SCAMP1-207ENST00000621999 PSPHP1O15172 72 aa6.62□□□□□ -1.35
SCAMP1-207ENST00000621999 A8MUN3 132 aa6.61□□□□□ -1.35
SCAMP1-207ENST00000621999 BIRC6Q9NR09 4857 aa6.61□□□□□ -1.35
SCAMP1-207ENST00000621999 LRP1Q07954 4544 aaKnown RBP6.6□□□□□ -1.35
SCAMP1-207ENST00000621999 A0A1B0GU69 56 aa6.59□□□□□ -1.35
SCAMP1-207ENST00000621999 S4R3F8 94 aa6.58□□□□□ -1.36
SCAMP1-207ENST00000621999 HSPG2P98160 4391 aa6.57□□□□□ -1.36
SCAMP1-207ENST00000621999 HERC2O95714 4834 aa6.56□□□□□ -1.36
SCAMP1-207ENST00000621999 CSAG1Q6PB30 78 aa6.55□□□□□ -1.36
SCAMP1-207ENST00000621999 A6NED7 52 aa6.55□□□□□ -1.36
SCAMP1-207ENST00000621999 MYCBP2O75592 4640 aa6.53□□□□□ -1.36
SCAMP1-207ENST00000621999 DMAC1Q96GE9 116 aa6.53□□□□□ -1.36
SCAMP1-207ENST00000621999 H1FX-AS1Q4G0G2 97 aa6.51□□□□□ -1.37
SCAMP1-207ENST00000621999 RPS28P62857 69 aaKnown RBP6.49□□□□□ -1.37
SCAMP1-207ENST00000621999 BRK1Q8WUW1 75 aa6.46□□□□□ -1.38
SCAMP1-207ENST00000621999 FAT3Q8TDW7 4589 aa6.43□□□□□ -1.38
SCAMP1-207ENST00000621999 LINC01554Q52M75 96 aa6.42□□□□□ -1.38
SCAMP1-207ENST00000621999 K7ERS5 55 aa6.41□□□□□ -1.38
SCAMP1-207ENST00000621999 ABCA13Q86UQ4 5058 aa6.37□□□□□ -1.39
SCAMP1-207ENST00000621999 LCA10Q71F78 164 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms