RNA–Protein interactions for RNA: ENST00000621791.4

CACNA1E-210, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1E, Length 16,171 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-210ENST00000621791 DNAH14Q0VDD8 3507 aa3.83□□□□□ -1.8
CACNA1E-210ENST00000621791 M0QZ58 72 aa3.83□□□□□ -1.8
CACNA1E-210ENST00000621791 TNRC18O15417 2968 aaPredicted RBP3.83□□□□□ -1.8
CACNA1E-210ENST00000621791 COL27A1Q8IZC6 1860 aaPredicted RBP3.83□□□□□ -1.8
CACNA1E-210ENST00000621791 SZT2Q5T011 3432 aa3.82□□□□□ -1.8
CACNA1E-210ENST00000621791 TENM3Q9P273 2699 aa3.82□□□□□ -1.8
CACNA1E-210ENST00000621791 PDZD2O15018 2839 aa3.81□□□□□ -1.8
CACNA1E-210ENST00000621791 HIVEP1P15822 2718 aa3.79□□□□□ -1.8
CACNA1E-210ENST00000621791 SEC61BP60468 96 aaKnown RBP3.79□□□□□ -1.8
CACNA1E-210ENST00000621791 KRTAP1-5Q9BYS1 174 aa3.79□□□□□ -1.8
CACNA1E-210ENST00000621791 C20orf166-AS1Q96NR2 134 aa3.78□□□□□ -1.8
CACNA1E-210ENST00000621791 A8MUU9 505 aa3.77□□□□□ -1.81
CACNA1E-210ENST00000621791 KRTAP10-1P60331 282 aa3.77□□□□□ -1.81
CACNA1E-210ENST00000621791 DCHS1Q96JQ0 3298 aa3.76□□□□□ -1.81
CACNA1E-210ENST00000621791 EYSQ5T1H1 3165 aa3.74□□□□□ -1.81
CACNA1E-210ENST00000621791 KRTAP10-2P60368 255 aa3.71□□□□□ -1.82
CACNA1E-210ENST00000621791 FLNCQ14315 2725 aa3.71□□□□□ -1.82
CACNA1E-210ENST00000621791 Q5VSD8 79 aa3.71□□□□□ -1.82
CACNA1E-210ENST00000621791 MYO15AQ9UKN7 3530 aa3.71□□□□□ -1.82
CACNA1E-210ENST00000621791 APCP25054 2843 aa3.71□□□□□ -1.82
CACNA1E-210ENST00000621791 CELSR1Q9NYQ6 3014 aa3.7□□□□□ -1.82
CACNA1E-210ENST00000621791 FBN2P35556 2912 aa3.69□□□□□ -1.82
CACNA1E-210ENST00000621791 SPEGQ15772 3267 aa3.68□□□□□ -1.82
CACNA1E-210ENST00000621791 KRTAP13-1Q8IUC0 172 aa3.67□□□□□ -1.82
CACNA1E-210ENST00000621791 ZANQ9Y493 2812 aa3.67□□□□□ -1.82
CACNA1E-210ENST00000621791 NIPBLQ6KC79 2804 aaeCLIP3.67□□□□□ -1.82
CACNA1E-210ENST00000621791 LOC400499M0QZD8 3231 aa3.66□□□□□ -1.82
CACNA1E-210ENST00000621791 ITPR2Q14571 2701 aa3.65□□□□□ -1.82
CACNA1E-210ENST00000621791 USP34Q70CQ2 3546 aa3.64□□□□□ -1.83
CACNA1E-210ENST00000621791 COL4A2P08572 1712 aa3.64□□□□□ -1.83
CACNA1E-210ENST00000621791 NF1P21359 2839 aa3.64□□□□□ -1.83
CACNA1E-210ENST00000621791 H0YAA0 97 aa3.64□□□□□ -1.83
CACNA1E-210ENST00000621791 C10orf95Q9H7T3 257 aa3.63□□□□□ -1.83
CACNA1E-210ENST00000621791 PKD1L1Q8TDX9 2849 aa3.62□□□□□ -1.83
CACNA1E-210ENST00000621791 TNP1P09430 55 aa3.62□□□□□ -1.83
CACNA1E-210ENST00000621791 SRRM2Q9UQ35 2752 aaKnown RBP3.61□□□□□ -1.83
CACNA1E-210ENST00000621791 OTOGQ6ZRI0 2925 aa3.6□□□□□ -1.83
CACNA1E-210ENST00000621791 Q6ZRN7 208 aaPredicted RBP3.59□□□□□ -1.84
CACNA1E-210ENST00000621791 SPTBN5Q9NRC6 3674 aaKnown RBP3.58□□□□□ -1.84
CACNA1E-210ENST00000621791 RPS29P62273 56 aaKnown RBP3.58□□□□□ -1.84
CACNA1E-210ENST00000621791 KRTAP13-2Q52LG2 175 aa3.58□□□□□ -1.84
CACNA1E-210ENST00000621791 PP632Q6XCG6 107 aa3.57□□□□□ -1.84
CACNA1E-210ENST00000621791 TENM1Q9UKZ4 2725 aa3.57□□□□□ -1.84
CACNA1E-210ENST00000621791 TENM2Q9NT68 2774 aa3.55□□□□□ -1.84
CACNA1E-210ENST00000621791 P0C880 135 aa3.55□□□□□ -1.84
CACNA1E-210ENST00000621791 KRTAP10-8P60410 259 aa3.5□□□□□ -1.85
CACNA1E-210ENST00000621791 TGP01266 2768 aa3.49□□□□□ -1.85
CACNA1E-210ENST00000621791 ANK3Q12955 4377 aaKnown RBP3.47□□□□□ -1.85
CACNA1E-210ENST00000621791 KRTAP13-3Q3SY46 172 aa3.47□□□□□ -1.85
CACNA1E-210ENST00000621791 TPRXLQ17RH7 258 aa3.47□□□□□ -1.85
CACNA1E-210ENST00000621791 TRRAPQ9Y4A5 3859 aa3.44□□□□□ -1.86
CACNA1E-210ENST00000621791 DNAH11Q96DT5 4516 aa3.43□□□□□ -1.86
CACNA1E-210ENST00000621791 VWFP04275 2813 aa3.42□□□□□ -1.86
CACNA1E-210ENST00000621791 WDFY3Q8IZQ1 3526 aa3.42□□□□□ -1.86
CACNA1E-210ENST00000621791 NBPF19A0A087WUL8 3843 aa3.41□□□□□ -1.86
CACNA1E-210ENST00000621791 ZFHX3Q15911 3703 aa3.41□□□□□ -1.86
CACNA1E-210ENST00000621791 KRTAP1-4P0C5Y4 121 aa3.4□□□□□ -1.86
CACNA1E-210ENST00000621791 COL7A1Q02388 2944 aa3.4□□□□□ -1.86
CACNA1E-210ENST00000621791 MXRA5Q9NR99 2828 aa3.4□□□□□ -1.87
CACNA1E-210ENST00000621791 KRTAP21-3Q3LHN1 58 aa3.39□□□□□ -1.87
CACNA1E-210ENST00000621791 SMG1Q96Q15 3661 aaKnown RBP3.38□□□□□ -1.87
CACNA1E-210ENST00000621791 CUBNO60494 3623 aa3.37□□□□□ -1.87
CACNA1E-210ENST00000621791 A0A1B0GVY2 172 aa3.36□□□□□ -1.87
CACNA1E-210ENST00000621791 KRTAP3-1Q9BYR8 98 aa3.36□□□□□ -1.87
CACNA1E-210ENST00000621791 KRTAP12-2P59991 146 aa3.36□□□□□ -1.87
CACNA1E-210ENST00000621791 KRTAP15-1Q3LI76 137 aa3.36□□□□□ -1.87
CACNA1E-210ENST00000621791 DNAH10Q8IVF4 4471 aa3.36□□□□□ -1.87
CACNA1E-210ENST00000621791 CSMD1Q96PZ7 3565 aa3.35□□□□□ -1.87
CACNA1E-210ENST00000621791 FBN1P35555 2871 aaKnown RBP3.35□□□□□ -1.87
CACNA1E-210ENST00000621791 HUWE1Q7Z6Z7 4374 aaKnown RBP3.33□□□□□ -1.88
CACNA1E-210ENST00000621791 FBN3Q75N90 2809 aa3.31□□□□□ -1.88
CACNA1E-210ENST00000621791 RELNP78509 3460 aa3.31□□□□□ -1.88
CACNA1E-210ENST00000621791 DNAH2Q9P225 4427 aa3.3□□□□□ -1.88
CACNA1E-210ENST00000621791 KRTAP10-10P60014 251 aa3.3□□□□□ -1.88
CACNA1E-210ENST00000621791 PRO2289Q9P1D8 64 aa3.3□□□□□ -1.88
CACNA1E-210ENST00000621791 KRTAP12-1P59990 96 aa3.3□□□□□ -1.88
CACNA1E-210ENST00000621791 XP32Q5T750 250 aa3.3□□□□□ -1.88
CACNA1E-210ENST00000621791 DMDP11532 3685 aa3.3□□□□□ -1.88
CACNA1E-210ENST00000621791 SVEP1Q4LDE5 3571 aa3.3□□□□□ -1.88
CACNA1E-210ENST00000621791 LAMA5O15230 3695 aa3.29□□□□□ -1.88
CACNA1E-210ENST00000621791 DNAH1Q9P2D7 4330 aa3.29□□□□□ -1.88
CACNA1E-210ENST00000621791 KRTAP10-6P60371 365 aaPredicted RBP3.28□□□□□ -1.88
CACNA1E-210ENST00000621791 AKAP9Q99996 3911 aa3.28□□□□□ -1.88
CACNA1E-210ENST00000621791 MEGF8Q7Z7M0 2845 aa3.27□□□□□ -1.89
CACNA1E-210ENST00000621791 CSMD3Q7Z407 3707 aa3.26□□□□□ -1.89
CACNA1E-210ENST00000621791 KRTAP13-4Q3LI77 160 aa3.26□□□□□ -1.89
CACNA1E-210ENST00000621791 ASPMQ8IZT6 3477 aa3.25□□□□□ -1.89
CACNA1E-210ENST00000621791 ZFHX4Q86UP3 3567 aa3.23□□□□□ -1.89
CACNA1E-210ENST00000621791 KRTAP3-2Q9BYR7 98 aa3.2□□□□□ -1.9
CACNA1E-210ENST00000621791 SPENQ96T58 3664 aaKnown RBP3.19□□□□□ -1.9
CACNA1E-210ENST00000621791 ALMS1Q8TCU4 4167 aa3.18□□□□□ -1.9
CACNA1E-210ENST00000621791 DNAH17Q9UFH2 4485 aa3.14□□□□□ -1.91
CACNA1E-210ENST00000621791 INE1O15225 51 aa3.13□□□□□ -1.91
CACNA1E-210ENST00000621791 HRNRQ86YZ3 2850 aaPredicted RBP3.12□□□□□ -1.91
CACNA1E-210ENST00000621791 PLECQ15149 4684 aaKnown RBP3.11□□□□□ -1.91
CACNA1E-210ENST00000621791 KRTAP3-3Q9BYR6 98 aa3.09□□□□□ -1.91
CACNA1E-210ENST00000621791 VPS13CQ709C8 3753 aa3.06□□□□□ -1.92
CACNA1E-210ENST00000621791 DNAH8Q96JB1 4490 aa3.06□□□□□ -1.92
CACNA1E-210ENST00000621791 VPS13DQ5THJ4 4388 aa3.05□□□□□ -1.92
CACNA1E-210ENST00000621791 APOBP04114 4563 aaKnown RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms