RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 NOTCH2NLQ7Z3S9 236 aa9□□□□□ -0.97
CBWD3-216ENST00000621396 ASB16-AS1Q495Z4 193 aa8.98□□□□□ -0.97
CBWD3-216ENST00000621396 PRR15Q8IV56 129 aa8.98□□□□□ -0.97
CBWD3-216ENST00000621396 J3KT08 172 aa8.96□□□□□ -0.97
CBWD3-216ENST00000621396 WFDC13Q8IUB5 93 aa8.96□□□□□ -0.98
CBWD3-216ENST00000621396 NDUFB1O75438 58 aa8.95□□□□□ -0.98
CBWD3-216ENST00000621396 RPS29P62273 56 aaKnown RBP8.94□□□□□ -0.98
CBWD3-216ENST00000621396 A0A1B0GVX0 72 aa8.93□□□□□ -0.98
CBWD3-216ENST00000621396 OXTP01178 125 aa8.92□□□□□ -0.98
CBWD3-216ENST00000621396 HCG22E2RYF7 251 aa8.9□□□□□ -0.98
CBWD3-216ENST00000621396 SCGB1A1P11684 91 aa8.9□□□□□ -0.99
CBWD3-216ENST00000621396 MMP24-AS1A0A0U1RRL7 71 aa8.89□□□□□ -0.99
CBWD3-216ENST00000621396 KRTAP29-1A8MX34 341 aaPredicted RBP8.89□□□□□ -0.99
CBWD3-216ENST00000621396 C8orf17Q9NRJ1 99 aa8.88□□□□□ -0.99
CBWD3-216ENST00000621396 J3QL48 77 aa8.86□□□□□ -0.99
CBWD3-216ENST00000621396 CASC2Q6XLA1 102 aa8.86□□□□□ -0.99
CBWD3-216ENST00000621396 C9orf92A6NGG3 77 aa8.86□□□□□ -0.99
CBWD3-216ENST00000621396 hDV103S1A0JD37 113 aa8.85□□□□□ -0.99
CBWD3-216ENST00000621396 LINC00313P59037 77 aa8.84□□□□□ -0.99
CBWD3-216ENST00000621396 LPAP08519 4548 aa8.81□□□□□ -1
CBWD3-216ENST00000621396 HERC1Q15751 4861 aa8.8□□□□□ -1
CBWD3-216ENST00000621396 ANAPC13Q9BS18 74 aa8.8□□□□□ -1
CBWD3-216ENST00000621396 PRR4Q16378 134 aa8.79□□□□□ -1
CBWD3-216ENST00000621396 NDUFS5O43920 106 aa8.78□□□□□ -1
CBWD3-216ENST00000621396 PCP4P48539 62 aa8.78□□□□□ -1
CBWD3-216ENST00000621396 ATOX1O00244 68 aa8.78□□□□□ -1
CBWD3-216ENST00000621396 MRPL34Q9BQ48 92 aaKnown RBP8.76□□□□□ -1.01
CBWD3-216ENST00000621396 IGLV7-46A0A075B6I9 117 aa8.75□□□□□ -1.01
CBWD3-216ENST00000621396 KRTAP16-1A8MUX0 517 aa8.75□□□□□ -1.01
CBWD3-216ENST00000621396 C8orf87E5RJ46 101 aa8.74□□□□□ -1.01
CBWD3-216ENST00000621396 OCR1Q9BZK8 76 aa8.74□□□□□ -1.01
CBWD3-216ENST00000621396 TMEM254Q8TBM7 123 aa8.72□□□□□ -1.01
CBWD3-216ENST00000621396 SERP2Q8N6R1 65 aa8.69□□□□□ -1.02
CBWD3-216ENST00000621396 FP248Q71RG6 208 aaPredicted RBP8.68□□□□□ -1.02
CBWD3-216ENST00000621396 TRAV7A0A075B6U4 112 aa8.67□□□□□ -1.02
CBWD3-216ENST00000621396 CCDC179H3BU77 68 aa8.67□□□□□ -1.02
CBWD3-216ENST00000621396 LRP2P98164 4655 aa8.67□□□□□ -1.02
CBWD3-216ENST00000621396 Q8N9P0 234 aaPredicted RBP8.66□□□□□ -1.02
CBWD3-216ENST00000621396 KRTAP13-3Q3SY46 172 aa8.65□□□□□ -1.02
CBWD3-216ENST00000621396 Q5W150 140 aa8.65□□□□□ -1.02
CBWD3-216ENST00000621396 COX7CP15954 63 aa8.64□□□□□ -1.03
CBWD3-216ENST00000621396 C20orf197Q8N268 126 aa8.62□□□□□ -1.03
CBWD3-216ENST00000621396 SMIM20Q8N5G0 67 aa8.62□□□□□ -1.03
CBWD3-216ENST00000621396 SNURFQ9Y675 71 aa8.62□□□□□ -1.03
CBWD3-216ENST00000621396 CYSTM1Q9H1C7 97 aa8.6□□□□□ -1.03
CBWD3-216ENST00000621396 XP32Q5T750 250 aa8.59□□□□□ -1.03
CBWD3-216ENST00000621396 H0Y9P7 68 aa8.58□□□□□ -1.04
CBWD3-216ENST00000621396 UQCRQO14949 82 aa8.58□□□□□ -1.04
CBWD3-216ENST00000621396 TP53AIP1Q9HCN2 124 aa8.58□□□□□ -1.04
CBWD3-216ENST00000621396 TRAV22A0A0B4J277 110 aa8.57□□□□□ -1.04
CBWD3-216ENST00000621396 C20orf166-AS1Q96NR2 134 aa8.57□□□□□ -1.04
CBWD3-216ENST00000621396 A8MUU9 505 aa8.56□□□□□ -1.04
CBWD3-216ENST00000621396 LINC00208Q96KT6 92 aa8.56□□□□□ -1.04
CBWD3-216ENST00000621396 C5orf47Q569G3 176 aa8.54□□□□□ -1.04
CBWD3-216ENST00000621396 TPRXLQ17RH7 258 aa8.54□□□□□ -1.04
CBWD3-216ENST00000621396 MP68P56378 58 aa8.51□□□□□ -1.05
CBWD3-216ENST00000621396 HMCN2Q8NDA2 5059 aa8.51□□□□□ -1.05
CBWD3-216ENST00000621396 Q75L30 129 aa8.5□□□□□ -1.05
CBWD3-216ENST00000621396 C1orf64Q8NEQ6 169 aa8.5□□□□□ -1.05
CBWD3-216ENST00000621396 A0A0U1RQV1 116 aa8.5□□□□□ -1.05
CBWD3-216ENST00000621396 ZCCHC13Q8WW36 166 aaKnown RBP8.5□□□□□ -1.05
CBWD3-216ENST00000621396 RPL37P61927 97 aaKnown RBP8.47□□□□□ -1.05
CBWD3-216ENST00000621396 IGKV2D-30A0A075B6S6 120 aa8.46□□□□□ -1.06
CBWD3-216ENST00000621396 IGKV2-30P06310 120 aa8.46□□□□□ -1.06
CBWD3-216ENST00000621396 KLKP1Q107X0 134 aa8.45□□□□□ -1.06
CBWD3-216ENST00000621396 MUC2Q02817 5179 aa8.45□□□□□ -1.06
CBWD3-216ENST00000621396 PCOTHQ58A44 107 aa8.44□□□□□ -1.06
CBWD3-216ENST00000621396 ATP11AUNQ6ZP68 121 aa8.44□□□□□ -1.06
CBWD3-216ENST00000621396 H7BZZ5 65 aa8.39□□□□□ -1.07
CBWD3-216ENST00000621396 CYP4F30PQ9H0H9 118 aa8.39□□□□□ -1.07
CBWD3-216ENST00000621396 LOC101927531A0A1B0GV80 90 aa8.36□□□□□ -1.07
CBWD3-216ENST00000621396 H3BPC8 53 aa8.36□□□□□ -1.07
CBWD3-216ENST00000621396 SPINK7P58062 85 aa8.35□□□□□ -1.07
CBWD3-216ENST00000621396 UBR4Q5T4S7 5183 aa8.32□□□□□ -1.08
CBWD3-216ENST00000621396 C7orf65Q6ZTY9 151 aa8.31□□□□□ -1.08
CBWD3-216ENST00000621396 HRES1P13985 223 aa8.28□□□□□ -1.08
CBWD3-216ENST00000621396 NDUFC1O43677 76 aa8.27□□□□□ -1.09
CBWD3-216ENST00000621396 C4orf26Q17RF5 130 aa8.27□□□□□ -1.09
CBWD3-216ENST00000621396 RNF213Q63HN8 5207 aa8.25□□□□□ -1.09
CBWD3-216ENST00000621396 KRTAP4-1Q9BYQ7 146 aa8.24□□□□□ -1.09
CBWD3-216ENST00000621396 SEC61BP60468 96 aaKnown RBP8.23□□□□□ -1.09
CBWD3-216ENST00000621396 MUC17Q685J3 4493 aa8.2□□□□□ -1.1
CBWD3-216ENST00000621396 TMEM258P61165 79 aa8.2□□□□□ -1.1
CBWD3-216ENST00000621396 FAM236DA0A1B0GTK5 79 aa8.19□□□□□ -1.1
CBWD3-216ENST00000621396 FAM236CP0DP71 79 aa8.19□□□□□ -1.1
CBWD3-216ENST00000621396 SVIPQ8NHG7 77 aa8.17□□□□□ -1.1
CBWD3-216ENST00000621396 SPANXA2-OT1Q8N9U9 137 aa8.14□□□□□ -1.11
CBWD3-216ENST00000621396 KRTAP3-1Q9BYR8 98 aa8.13□□□□□ -1.11
CBWD3-216ENST00000621396 DMAC1Q96GE9 116 aa8.06□□□□□ -1.12
CBWD3-216ENST00000621396 COX6B2Q6YFQ2 88 aa8.05□□□□□ -1.12
CBWD3-216ENST00000621396 FAT4Q6V0I7 4981 aa8.03□□□□□ -1.12
CBWD3-216ENST00000621396 MPLKIPQ8TAP9 179 aa8.03□□□□□ -1.12
CBWD3-216ENST00000621396 ATP5EP56381 51 aaPredicted RBP8.02□□□□□ -1.13
CBWD3-216ENST00000621396 ACYP2P14621 99 aa8□□□□□ -1.13
CBWD3-216ENST00000621396 COA5Q86WW8 74 aa8□□□□□ -1.13
CBWD3-216ENST00000621396 RBM12B-AS1Q9P1G2 102 aa7.99□□□□□ -1.13
CBWD3-216ENST00000621396 SERP1Q9Y6X1 66 aa7.95□□□□□ -1.14
CBWD3-216ENST00000621396 A8MUN3 132 aa7.93□□□□□ -1.14
CBWD3-216ENST00000621396 KRTAP19-2Q3LHN2 52 aa7.92□□□□□ -1.14
CBWD3-216ENST00000621396 CHKB-CPT1BH3BT56 60 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms