RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 A8MWP4 228 aa5.89□□□□□ -1.47
POLR2J3-221ENST00000621093 LINC00313P59037 77 aa5.89□□□□□ -1.47
POLR2J3-221ENST00000621093 KRTAP16-1A8MUX0 517 aa5.88□□□□□ -1.47
POLR2J3-221ENST00000621093 BPY2O14599 106 aa5.88□□□□□ -1.47
POLR2J3-221ENST00000621093 UBL5Q9BZL1 73 aa5.88□□□□□ -1.47
POLR2J3-221ENST00000621093 NDUFB1O75438 58 aa5.87□□□□□ -1.47
POLR2J3-221ENST00000621093 RPL37P61927 97 aaKnown RBP5.87□□□□□ -1.47
POLR2J3-221ENST00000621093 UBR4Q5T4S7 5183 aa5.87□□□□□ -1.47
POLR2J3-221ENST00000621093 MUC17Q685J3 4493 aa5.86□□□□□ -1.47
POLR2J3-221ENST00000621093 C8orf87E5RJ46 101 aa5.86□□□□□ -1.47
POLR2J3-221ENST00000621093 K7EQZ3 153 aa5.86□□□□□ -1.47
POLR2J3-221ENST00000621093 PRR15Q8IV56 129 aa5.86□□□□□ -1.47
POLR2J3-221ENST00000621093 Q8N9L7 120 aa5.86□□□□□ -1.47
POLR2J3-221ENST00000621093 PCOTHQ58A44 107 aa5.85□□□□□ -1.47
POLR2J3-221ENST00000621093 C8orf17Q9NRJ1 99 aa5.85□□□□□ -1.47
POLR2J3-221ENST00000621093 SEC61BP60468 96 aaKnown RBP5.84□□□□□ -1.47
POLR2J3-221ENST00000621093 C20orf166-AS1Q96NR2 134 aa5.84□□□□□ -1.47
POLR2J3-221ENST00000621093 KRTAP4-1Q9BYQ7 146 aa5.84□□□□□ -1.47
POLR2J3-221ENST00000621093 MMP24-AS1A0A0U1RRL7 71 aa5.83□□□□□ -1.48
POLR2J3-221ENST00000621093 FAM240AA0A1B0GVK7 77 aa5.83□□□□□ -1.48
POLR2J3-221ENST00000621093 A8MUU9 505 aa5.83□□□□□ -1.48
POLR2J3-221ENST00000621093 ACYP1P07311 99 aa5.83□□□□□ -1.48
POLR2J3-221ENST00000621093 Q75L30 129 aa5.83□□□□□ -1.48
POLR2J3-221ENST00000621093 RNF213Q63HN8 5207 aa5.78□□□□□ -1.48
POLR2J3-221ENST00000621093 CXCL6P80162 114 aa5.77□□□□□ -1.49
POLR2J3-221ENST00000621093 ATP11AUNQ6ZP68 121 aa5.77□□□□□ -1.49
POLR2J3-221ENST00000621093 WFDC13Q8IUB5 93 aa5.77□□□□□ -1.49
POLR2J3-221ENST00000621093 hDV103S1A0JD37 113 aa5.76□□□□□ -1.49
POLR2J3-221ENST00000621093 Q8N9P0 234 aaPredicted RBP5.76□□□□□ -1.49
POLR2J3-221ENST00000621093 TMEM254Q8TBM7 123 aa5.76□□□□□ -1.49
POLR2J3-221ENST00000621093 J3QR89 54 aa5.75□□□□□ -1.49
POLR2J3-221ENST00000621093 MRPL34Q9BQ48 92 aaKnown RBP5.75□□□□□ -1.49
POLR2J3-221ENST00000621093 CASC2Q6XLA1 102 aa5.74□□□□□ -1.49
POLR2J3-221ENST00000621093 LINC00643Q86TS7 51 aa5.73□□□□□ -1.49
POLR2J3-221ENST00000621093 HCG22E2RYF7 251 aa5.72□□□□□ -1.49
POLR2J3-221ENST00000621093 NDUFS5O43920 106 aa5.71□□□□□ -1.5
POLR2J3-221ENST00000621093 ATP5EP2Q5VTU8 51 aa5.71□□□□□ -1.5
POLR2J3-221ENST00000621093 ZCCHC13Q8WW36 166 aaKnown RBP5.71□□□□□ -1.5
POLR2J3-221ENST00000621093 HIST1H4AP62805 103 aaKnown RBP5.69□□□□□ -1.5
POLR2J3-221ENST00000621093 K7ERU9 68 aa5.68□□□□□ -1.5
POLR2J3-221ENST00000621093 MUC2Q02817 5179 aa5.67□□□□□ -1.5
POLR2J3-221ENST00000621093 A0A087WVE0 104 aa5.67□□□□□ -1.5
POLR2J3-221ENST00000621093 Q5W150 140 aa5.66□□□□□ -1.5
POLR2J3-221ENST00000621093 KRTAP19-2Q3LHN2 52 aa5.64□□□□□ -1.51
POLR2J3-221ENST00000621093 MT-ATP8P03928 68 aa5.61□□□□□ -1.51
POLR2J3-221ENST00000621093 LCE2CQ5TA81 110 aa5.61□□□□□ -1.51
POLR2J3-221ENST00000621093 HRES1P13985 223 aa5.6□□□□□ -1.51
POLR2J3-221ENST00000621093 SPINK7P58062 85 aa5.6□□□□□ -1.51
POLR2J3-221ENST00000621093 A0A0U1RQV1 116 aa5.58□□□□□ -1.52
POLR2J3-221ENST00000621093 IGKV2D-30A0A075B6S6 120 aa5.56□□□□□ -1.52
POLR2J3-221ENST00000621093 IGKV2-30P06310 120 aa5.56□□□□□ -1.52
POLR2J3-221ENST00000621093 TP53AIP1Q9HCN2 124 aa5.56□□□□□ -1.52
POLR2J3-221ENST00000621093 COX6B2Q6YFQ2 88 aa5.54□□□□□ -1.52
POLR2J3-221ENST00000621093 MPLKIPQ8TAP9 179 aa5.54□□□□□ -1.52
POLR2J3-221ENST00000621093 LCE2AQ5TA79 106 aaPredicted RBP5.52□□□□□ -1.53
POLR2J3-221ENST00000621093 C7orf65Q6ZTY9 151 aa5.52□□□□□ -1.53
POLR2J3-221ENST00000621093 IMUPQ9GZP8 106 aa5.52□□□□□ -1.53
POLR2J3-221ENST00000621093 FAT4Q6V0I7 4981 aa5.51□□□□□ -1.53
POLR2J3-221ENST00000621093 TRAV22A0A0B4J277 110 aa5.5□□□□□ -1.53
POLR2J3-221ENST00000621093 UQCRQO14949 82 aa5.5□□□□□ -1.53
POLR2J3-221ENST00000621093 MT1HP80294 61 aa5.5□□□□□ -1.53
POLR2J3-221ENST00000621093 OCR1Q9BZK8 76 aa5.5□□□□□ -1.53
POLR2J3-221ENST00000621093 FAM236DA0A1B0GTK5 79 aa5.49□□□□□ -1.53
POLR2J3-221ENST00000621093 FAM236CP0DP71 79 aa5.49□□□□□ -1.53
POLR2J3-221ENST00000621093 RBM12B-AS1Q9P1G2 102 aa5.49□□□□□ -1.53
POLR2J3-221ENST00000621093 H0Y9P7 68 aa5.48□□□□□ -1.53
POLR2J3-221ENST00000621093 FAM236AA0A1B0GUQ0 79 aa5.47□□□□□ -1.53
POLR2J3-221ENST00000621093 FAM236BA0A1B0GV22 79 aa5.47□□□□□ -1.53
POLR2J3-221ENST00000621093 SCGB1A1P11684 91 aa5.46□□□□□ -1.54
POLR2J3-221ENST00000621093 CYP4F30PQ9H0H9 118 aa5.45□□□□□ -1.54
POLR2J3-221ENST00000621093 C4orf26Q17RF5 130 aa5.44□□□□□ -1.54
POLR2J3-221ENST00000621093 LOC101927531A0A1B0GV80 90 aa5.42□□□□□ -1.54
POLR2J3-221ENST00000621093 C1orf64Q8NEQ6 169 aa5.42□□□□□ -1.54
POLR2J3-221ENST00000621093 LINC00208Q96KT6 92 aa5.42□□□□□ -1.54
POLR2J3-221ENST00000621093 ATOX1O00244 68 aa5.41□□□□□ -1.54
POLR2J3-221ENST00000621093 C5orf47Q569G3 176 aa5.4□□□□□ -1.54
POLR2J3-221ENST00000621093 FLGP20930 4061 aaPredicted RBP5.4□□□□□ -1.55
POLR2J3-221ENST00000621093 M0R2T5 61 aa5.39□□□□□ -1.55
POLR2J3-221ENST00000621093 MP68P56378 58 aa5.39□□□□□ -1.55
POLR2J3-221ENST00000621093 KRTAP3-1Q9BYR8 98 aa5.39□□□□□ -1.55
POLR2J3-221ENST00000621093 TRAV7A0A075B6U4 112 aa5.38□□□□□ -1.55
POLR2J3-221ENST00000621093 KLKP1Q107X0 134 aa5.38□□□□□ -1.55
POLR2J3-221ENST00000621093 H1FX-AS1Q4G0G2 97 aa5.36□□□□□ -1.55
POLR2J3-221ENST00000621093 KRTAP10-6P60371 365 aaPredicted RBP5.35□□□□□ -1.55
POLR2J3-221ENST00000621093 SMIM20Q8N5G0 67 aa5.35□□□□□ -1.55
POLR2J3-221ENST00000621093 H3BPC8 53 aa5.34□□□□□ -1.55
POLR2J3-221ENST00000621093 LORP23490 312 aaPredicted RBP5.32□□□□□ -1.56
POLR2J3-221ENST00000621093 SERP2Q8N6R1 65 aa5.3□□□□□ -1.56
POLR2J3-221ENST00000621093 SNURFQ9Y675 71 aa5.29□□□□□ -1.56
POLR2J3-221ENST00000621093 C20orf197Q8N268 126 aa5.26□□□□□ -1.57
POLR2J3-221ENST00000621093 S4R3F8 94 aa5.26□□□□□ -1.57
POLR2J3-221ENST00000621093 KRTAP9-8Q9BYQ0 159 aa5.25□□□□□ -1.57
POLR2J3-221ENST00000621093 LCA10Q71F78 164 aa5.24□□□□□ -1.57
POLR2J3-221ENST00000621093 COX7CP15954 63 aa5.22□□□□□ -1.57
POLR2J3-221ENST00000621093 MT2AP02795 61 aa5.21□□□□□ -1.58
POLR2J3-221ENST00000621093 KRTAP3-3Q9BYR6 98 aa5.21□□□□□ -1.58
POLR2J3-221ENST00000621093 A8MUN3 132 aa5.19□□□□□ -1.58
POLR2J3-221ENST00000621093 DMAC1Q96GE9 116 aa5.19□□□□□ -1.58
POLR2J3-221ENST00000621093 ANAPC13Q9BS18 74 aa5.19□□□□□ -1.58
POLR2J3-221ENST00000621093 MT1FP04733 61 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms