RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 PDZD2O15018 2839 aa6.36□□□□□ -1.39
PCDHA4-204ENST00000618834 XIRP2A4UGR9 3374 aa6.34□□□□□ -1.39
PCDHA4-204ENST00000618834 DMXL2Q8TDJ6 3036 aa6.32□□□□□ -1.4
PCDHA4-204ENST00000618834 KRTAP13-2Q52LG2 175 aa6.32□□□□□ -1.4
PCDHA4-204ENST00000618834 Q6ZRN7 208 aaPredicted RBP6.32□□□□□ -1.4
PCDHA4-204ENST00000618834 P0C880 135 aa6.31□□□□□ -1.4
PCDHA4-204ENST00000618834 KRTAP13-1Q8IUC0 172 aa6.29□□□□□ -1.4
PCDHA4-204ENST00000618834 TNRC18O15417 2968 aaPredicted RBP6.29□□□□□ -1.4
PCDHA4-204ENST00000618834 H0YAA0 97 aa6.28□□□□□ -1.4
PCDHA4-204ENST00000618834 RANBP2P49792 3224 aaKnown RBP6.28□□□□□ -1.4
PCDHA4-204ENST00000618834 ZZEF1O43149 2961 aa6.26□□□□□ -1.41
PCDHA4-204ENST00000618834 KRTAP7-1Q8IUC3 87 aa6.25□□□□□ -1.41
PCDHA4-204ENST00000618834 SRRM2Q9UQ35 2752 aaKnown RBP6.23□□□□□ -1.41
PCDHA4-204ENST00000618834 DCHS2Q6V1P9 2916 aa6.23□□□□□ -1.41
PCDHA4-204ENST00000618834 ZANQ9Y493 2812 aa6.23□□□□□ -1.41
PCDHA4-204ENST00000618834 MKI67P46013 3256 aaKnown RBP6.19□□□□□ -1.42
PCDHA4-204ENST00000618834 KRTAP10-8P60410 259 aa6.19□□□□□ -1.42
PCDHA4-204ENST00000618834 REV3LO60673 3130 aa6.18□□□□□ -1.42
PCDHA4-204ENST00000618834 FBN2P35556 2912 aa6.16□□□□□ -1.42
PCDHA4-204ENST00000618834 CELSR3Q9NYQ7 3312 aa6.13□□□□□ -1.43
PCDHA4-204ENST00000618834 DNAH14Q0VDD8 3507 aa6.13□□□□□ -1.43
PCDHA4-204ENST00000618834 LAMA1P25391 3075 aa6.12□□□□□ -1.43
PCDHA4-204ENST00000618834 VWFP04275 2813 aa6.12□□□□□ -1.43
PCDHA4-204ENST00000618834 HTTP42858 3142 aa6.1□□□□□ -1.43
PCDHA4-204ENST00000618834 HRNRQ86YZ3 2850 aaPredicted RBP6.09□□□□□ -1.43
PCDHA4-204ENST00000618834 MXRA5Q9NR99 2828 aa6.09□□□□□ -1.43
PCDHA4-204ENST00000618834 COL6A3P12111 3177 aa6.09□□□□□ -1.44
PCDHA4-204ENST00000618834 USP34Q70CQ2 3546 aa6.08□□□□□ -1.44
PCDHA4-204ENST00000618834 TENM4Q6N022 2769 aa6.06□□□□□ -1.44
PCDHA4-204ENST00000618834 BOD1L1Q8NFC6 3051 aa6.06□□□□□ -1.44
PCDHA4-204ENST00000618834 PRO2289Q9P1D8 64 aa6.05□□□□□ -1.44
PCDHA4-204ENST00000618834 CELSR1Q9NYQ6 3014 aa6.04□□□□□ -1.44
PCDHA4-204ENST00000618834 DMXL1Q9Y485 3027 aa6.04□□□□□ -1.44
PCDHA4-204ENST00000618834 XP32Q5T750 250 aa6.03□□□□□ -1.44
PCDHA4-204ENST00000618834 ATMQ13315 3056 aa6.01□□□□□ -1.45
PCDHA4-204ENST00000618834 PKD1L1Q8TDX9 2849 aa6.01□□□□□ -1.45
PCDHA4-204ENST00000618834 ADGRG4Q8IZF6 3080 aa5.99□□□□□ -1.45
PCDHA4-204ENST00000618834 BRCA2P51587 3418 aa5.99□□□□□ -1.45
PCDHA4-204ENST00000618834 A0A1B0GVY2 172 aa5.98□□□□□ -1.45
PCDHA4-204ENST00000618834 LAMA3Q16787 3333 aa5.98□□□□□ -1.45
PCDHA4-204ENST00000618834 UNC80Q8N2C7 3258 aa5.94□□□□□ -1.46
PCDHA4-204ENST00000618834 KRTAP10-10P60014 251 aa5.9□□□□□ -1.46
PCDHA4-204ENST00000618834 CDH23Q9H251 3354 aa5.9□□□□□ -1.47
PCDHA4-204ENST00000618834 TPRXLQ17RH7 258 aa5.89□□□□□ -1.47
PCDHA4-204ENST00000618834 KRTAP1-4P0C5Y4 121 aa5.88□□□□□ -1.47
PCDHA4-204ENST00000618834 TENM2Q9NT68 2774 aa5.86□□□□□ -1.47
PCDHA4-204ENST00000618834 KRTAP12-2P59991 146 aa5.85□□□□□ -1.47
PCDHA4-204ENST00000618834 CFAP47Q6ZTR5 3102 aa5.84□□□□□ -1.47
PCDHA4-204ENST00000618834 KRTAP13-4Q3LI77 160 aa5.81□□□□□ -1.48
PCDHA4-204ENST00000618834 COL7A1Q02388 2944 aa5.81□□□□□ -1.48
PCDHA4-204ENST00000618834 SPTBN5Q9NRC6 3674 aaKnown RBP5.79□□□□□ -1.48
PCDHA4-204ENST00000618834 VCANP13611 3396 aa5.79□□□□□ -1.48
PCDHA4-204ENST00000618834 ZFHX3Q15911 3703 aa5.78□□□□□ -1.48
PCDHA4-204ENST00000618834 WDFY3Q8IZQ1 3526 aa5.78□□□□□ -1.48
PCDHA4-204ENST00000618834 KRTAP13-3Q3SY46 172 aa5.76□□□□□ -1.49
PCDHA4-204ENST00000618834 SPEGQ15772 3267 aa5.74□□□□□ -1.49
PCDHA4-204ENST00000618834 SZT2Q5T011 3432 aa5.74□□□□□ -1.49
PCDHA4-204ENST00000618834 MEGF8Q7Z7M0 2845 aa5.71□□□□□ -1.5
PCDHA4-204ENST00000618834 KRTAP12-1P59990 96 aa5.67□□□□□ -1.5
PCDHA4-204ENST00000618834 INE1O15225 51 aa5.65□□□□□ -1.51
PCDHA4-204ENST00000618834 NBPF19A0A087WUL8 3843 aa5.64□□□□□ -1.51
PCDHA4-204ENST00000618834 KRTAP15-1Q3LI76 137 aa5.64□□□□□ -1.51
PCDHA4-204ENST00000618834 MYO15AQ9UKN7 3530 aa5.6□□□□□ -1.51
PCDHA4-204ENST00000618834 FBN3Q75N90 2809 aa5.59□□□□□ -1.51
PCDHA4-204ENST00000618834 EYSQ5T1H1 3165 aa5.58□□□□□ -1.52
PCDHA4-204ENST00000618834 ZFHX4Q86UP3 3567 aa5.58□□□□□ -1.52
PCDHA4-204ENST00000618834 LAMA5O15230 3695 aa5.57□□□□□ -1.52
PCDHA4-204ENST00000618834 ASPMQ8IZT6 3477 aa5.54□□□□□ -1.52
PCDHA4-204ENST00000618834 SMG1Q96Q15 3661 aaKnown RBP5.53□□□□□ -1.52
PCDHA4-204ENST00000618834 KRTAP21-3Q3LHN1 58 aa5.53□□□□□ -1.52
PCDHA4-204ENST00000618834 DMDP11532 3685 aa5.5□□□□□ -1.53
PCDHA4-204ENST00000618834 FBN1P35555 2871 aaKnown RBP5.48□□□□□ -1.53
PCDHA4-204ENST00000618834 SPENQ96T58 3664 aaKnown RBP5.48□□□□□ -1.53
PCDHA4-204ENST00000618834 VPS13CQ709C8 3753 aa5.38□□□□□ -1.55
PCDHA4-204ENST00000618834 RELNP78509 3460 aa5.38□□□□□ -1.55
PCDHA4-204ENST00000618834 KRTAP3-1Q9BYR8 98 aa5.37□□□□□ -1.55
PCDHA4-204ENST00000618834 LOC400499M0QZD8 3231 aa5.36□□□□□ -1.55
PCDHA4-204ENST00000618834 DCHS1Q96JQ0 3298 aa5.36□□□□□ -1.55
PCDHA4-204ENST00000618834 OTOGQ6ZRI0 2925 aa5.35□□□□□ -1.55
PCDHA4-204ENST00000618834 KRTAP10-6P60371 365 aaPredicted RBP5.34□□□□□ -1.56
PCDHA4-204ENST00000618834 AKAP9Q99996 3911 aa5.34□□□□□ -1.56
PCDHA4-204ENST00000618834 CSMD1Q96PZ7 3565 aa5.31□□□□□ -1.56
PCDHA4-204ENST00000618834 KRTAP10-12P60413 245 aa5.27□□□□□ -1.57
PCDHA4-204ENST00000618834 TRRAPQ9Y4A5 3859 aa5.26□□□□□ -1.57
PCDHA4-204ENST00000618834 CRCT1Q9UGL9 99 aa5.19□□□□□ -1.58
PCDHA4-204ENST00000618834 ALMS1Q8TCU4 4167 aa5.16□□□□□ -1.58
PCDHA4-204ENST00000618834 KRTAP23-1A1A580 65 aa5.11□□□□□ -1.59
PCDHA4-204ENST00000618834 KRTAP12-3P60328 96 aa5.1□□□□□ -1.59
PCDHA4-204ENST00000618834 KRTAP3-2Q9BYR7 98 aa5.09□□□□□ -1.59
PCDHA4-204ENST00000618834 SVEP1Q4LDE5 3571 aa5.05□□□□□ -1.6
PCDHA4-204ENST00000618834 KRTAP3-3Q9BYR6 98 aa5.04□□□□□ -1.6
PCDHA4-204ENST00000618834 CSMD3Q7Z407 3707 aa5.04□□□□□ -1.6
PCDHA4-204ENST00000618834 CUBNO60494 3623 aa5.03□□□□□ -1.6
PCDHA4-204ENST00000618834 LCE3AQ5TA76 89 aa4.97□□□□□ -1.61
PCDHA4-204ENST00000618834 BSNQ9UPA5 3926 aa4.94□□□□□ -1.62
PCDHA4-204ENST00000618834 KRTAP10-5P60370 271 aa4.93□□□□□ -1.62
PCDHA4-204ENST00000618834 CMYA5Q8N3K9 4069 aa4.92□□□□□ -1.62
PCDHA4-204ENST00000618834 LYSTQ99698 3801 aa4.92□□□□□ -1.62
PCDHA4-204ENST00000618834 MUC3AQ02505 3323 aa4.9□□□□□ -1.62
PCDHA4-204ENST00000618834 CSMD2Q7Z408 3487 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms