RNA–Protein interactions for RNA: ENST00000618666.4

CCNT1-205, Transcript of cyclin T1, humanhuman

TSL 2 BASIC

Gene CCNT1, Length 6,915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-205ENST00000618666 KRTAP11-1Q8IUC1 163 aa3.18□□□□□ -1.9
CCNT1-205ENST00000618666 M0QZ58 72 aa3.17□□□□□ -1.9
CCNT1-205ENST00000618666 SPENQ96T58 3664 aaKnown RBP3.17□□□□□ -1.9
CCNT1-205ENST00000618666 R4GN34 69 aa3.17□□□□□ -1.9
CCNT1-205ENST00000618666 ZZEF1O43149 2961 aa3.17□□□□□ -1.9
CCNT1-205ENST00000618666 S4R3F8 94 aa3.17□□□□□ -1.9
CCNT1-205ENST00000618666 CELSR2Q9HCU4 2923 aa3.16□□□□□ -1.9
CCNT1-205ENST00000618666 SETXQ7Z333 2677 aaKnown RBP3.16□□□□□ -1.9
CCNT1-205ENST00000618666 FLNCQ14315 2725 aa3.16□□□□□ -1.9
CCNT1-205ENST00000618666 KRTAP10-8P60410 259 aa3.15□□□□□ -1.91
CCNT1-205ENST00000618666 KRTAP29-1A8MX34 341 aaPredicted RBP3.15□□□□□ -1.91
CCNT1-205ENST00000618666 UBR5O95071 2799 aaPredicted RBP3.15□□□□□ -1.91
CCNT1-205ENST00000618666 LAMA5O15230 3695 aa3.14□□□□□ -1.91
CCNT1-205ENST00000618666 A0A087WTM6 91 aa3.13□□□□□ -1.91
CCNT1-205ENST00000618666 FLNAP21333 2647 aaKnown RBP3.13□□□□□ -1.91
CCNT1-205ENST00000618666 KRTAP10-11P60412 298 aa3.12□□□□□ -1.91
CCNT1-205ENST00000618666 ASB16-AS1Q495Z4 193 aa3.12□□□□□ -1.91
CCNT1-205ENST00000618666 P0C880 135 aa3.12□□□□□ -1.91
CCNT1-205ENST00000618666 KRTAP10-3P60369 221 aa3.1□□□□□ -1.91
CCNT1-205ENST00000618666 SMG1Q96Q15 3661 aaKnown RBP3.1□□□□□ -1.91
CCNT1-205ENST00000618666 KRTAP1-3Q8IUG1 177 aa3.09□□□□□ -1.91
CCNT1-205ENST00000618666 TEX15Q9BXT5 2789 aa3.09□□□□□ -1.91
CCNT1-205ENST00000618666 ITPR2Q14571 2701 aa3.09□□□□□ -1.92
CCNT1-205ENST00000618666 KRTAP1-1Q07627 177 aa3.09□□□□□ -1.92
CCNT1-205ENST00000618666 H0YAA0 97 aa3.08□□□□□ -1.92
CCNT1-205ENST00000618666 Q6ZSA8 131 aa3.08□□□□□ -1.92
CCNT1-205ENST00000618666 SVEP1Q4LDE5 3571 aa3.07□□□□□ -1.92
CCNT1-205ENST00000618666 SRRM2Q9UQ35 2752 aaKnown RBP3.06□□□□□ -1.92
CCNT1-205ENST00000618666 APCP25054 2843 aa3.05□□□□□ -1.92
CCNT1-205ENST00000618666 M0R2T5 61 aa3.05□□□□□ -1.92
CCNT1-205ENST00000618666 HIVEP1P15822 2718 aa3.05□□□□□ -1.92
CCNT1-205ENST00000618666 SPRR1AP35321 89 aa3.04□□□□□ -1.92
CCNT1-205ENST00000618666 LCE6AA0A183 80 aa3.04□□□□□ -1.92
CCNT1-205ENST00000618666 SPRR1BP22528 89 aa3.03□□□□□ -1.92
CCNT1-205ENST00000618666 PLAC8Q9NZF1 115 aa3.01□□□□□ -1.93
CCNT1-205ENST00000618666 CELSR1Q9NYQ6 3014 aa3.01□□□□□ -1.93
CCNT1-205ENST00000618666 KRTAP1-5Q9BYS1 174 aa3□□□□□ -1.93
CCNT1-205ENST00000618666 BSNQ9UPA5 3926 aa3□□□□□ -1.93
CCNT1-205ENST00000618666 DCHS2Q6V1P9 2916 aa2.98□□□□□ -1.93
CCNT1-205ENST00000618666 TPRXLQ17RH7 258 aa2.98□□□□□ -1.93
CCNT1-205ENST00000618666 KRTAP7-1Q8IUC3 87 aa2.97□□□□□ -1.93
CCNT1-205ENST00000618666 TENM3Q9P273 2699 aa2.95□□□□□ -1.94
CCNT1-205ENST00000618666 NBPF19A0A087WUL8 3843 aa2.94□□□□□ -1.94
CCNT1-205ENST00000618666 NF1P21359 2839 aa2.94□□□□□ -1.94
CCNT1-205ENST00000618666 KRTAP21-3Q3LHN1 58 aa2.91□□□□□ -1.94
CCNT1-205ENST00000618666 RPS29P62273 56 aaKnown RBP2.9□□□□□ -1.94
CCNT1-205ENST00000618666 KRTAP10-2P60368 255 aa2.89□□□□□ -1.95
CCNT1-205ENST00000618666 PDZD2O15018 2839 aa2.89□□□□□ -1.95
CCNT1-205ENST00000618666 CSMD2Q7Z408 3487 aa2.89□□□□□ -1.95
CCNT1-205ENST00000618666 NIPBLQ6KC79 2804 aaeCLIP2.89□□□□□ -1.95
CCNT1-205ENST00000618666 TGP01266 2768 aa2.88□□□□□ -1.95
CCNT1-205ENST00000618666 ZANQ9Y493 2812 aa2.88□□□□□ -1.95
CCNT1-205ENST00000618666 KRTAP12-2P59991 146 aa2.88□□□□□ -1.95
CCNT1-205ENST00000618666 TENM4Q6N022 2769 aa2.87□□□□□ -1.95
CCNT1-205ENST00000618666 Q5VSD8 79 aa2.87□□□□□ -1.95
CCNT1-205ENST00000618666 A0A1B0GVY2 172 aa2.86□□□□□ -1.95
CCNT1-205ENST00000618666 TNP1P09430 55 aa2.86□□□□□ -1.95
CCNT1-205ENST00000618666 KRTAP10-1P60331 282 aa2.85□□□□□ -1.95
CCNT1-205ENST00000618666 FBN2P35556 2912 aa2.85□□□□□ -1.95
CCNT1-205ENST00000618666 KRTAP13-2Q52LG2 175 aa2.83□□□□□ -1.96
CCNT1-205ENST00000618666 VPS13CQ709C8 3753 aa2.82□□□□□ -1.96
CCNT1-205ENST00000618666 KRTAP15-1Q3LI76 137 aa2.82□□□□□ -1.96
CCNT1-205ENST00000618666 VWFP04275 2813 aa2.81□□□□□ -1.96
CCNT1-205ENST00000618666 PP632Q6XCG6 107 aa2.8□□□□□ -1.96
CCNT1-205ENST00000618666 CSMD3Q7Z407 3707 aa2.8□□□□□ -1.96
CCNT1-205ENST00000618666 Q6ZRN7 208 aaPredicted RBP2.77□□□□□ -1.97
CCNT1-205ENST00000618666 MXRA5Q9NR99 2828 aa2.77□□□□□ -1.97
CCNT1-205ENST00000618666 TENM1Q9UKZ4 2725 aa2.77□□□□□ -1.97
CCNT1-205ENST00000618666 PKD1L1Q8TDX9 2849 aa2.75□□□□□ -1.97
CCNT1-205ENST00000618666 HRNRQ86YZ3 2850 aaPredicted RBP2.75□□□□□ -1.97
CCNT1-205ENST00000618666 KRTAP13-4Q3LI77 160 aa2.75□□□□□ -1.97
CCNT1-205ENST00000618666 KRTAP13-1Q8IUC0 172 aa2.74□□□□□ -1.97
CCNT1-205ENST00000618666 COL7A1Q02388 2944 aa2.74□□□□□ -1.97
CCNT1-205ENST00000618666 AKAP9Q99996 3911 aa2.72□□□□□ -1.97
CCNT1-205ENST00000618666 OTOGQ6ZRI0 2925 aa2.72□□□□□ -1.97
CCNT1-205ENST00000618666 KRTAP12-1P59990 96 aa2.69□□□□□ -1.98
CCNT1-205ENST00000618666 MEGF8Q7Z7M0 2845 aa2.68□□□□□ -1.98
CCNT1-205ENST00000618666 ZNF469Q96JG9 3925 aaPredicted RBP2.67□□□□□ -1.98
CCNT1-205ENST00000618666 FBN1P35555 2871 aaKnown RBP2.67□□□□□ -1.98
CCNT1-205ENST00000618666 CRCT1Q9UGL9 99 aa2.64□□□□□ -1.99
CCNT1-205ENST00000618666 TENM2Q9NT68 2774 aa2.63□□□□□ -1.99
CCNT1-205ENST00000618666 KRTAP13-3Q3SY46 172 aa2.63□□□□□ -1.99
CCNT1-205ENST00000618666 KRTAP3-1Q9BYR8 98 aa2.62□□□□□ -1.99
CCNT1-205ENST00000618666 PRO2289Q9P1D8 64 aa2.62□□□□□ -1.99
CCNT1-205ENST00000618666 KRTAP23-1A1A580 65 aa2.58□□□□□ -2
CCNT1-205ENST00000618666 FBN3Q75N90 2809 aa2.58□□□□□ -2
CCNT1-205ENST00000618666 KRTAP1-4P0C5Y4 121 aa2.58□□□□□ -2
CCNT1-205ENST00000618666 XP32Q5T750 250 aa2.57□□□□□ -2
CCNT1-205ENST00000618666 CMYA5Q8N3K9 4069 aa2.57□□□□□ -2
CCNT1-205ENST00000618666 KRTAP10-6P60371 365 aaPredicted RBP2.56□□□□□ -2
CCNT1-205ENST00000618666 INE1O15225 51 aa2.53□□□□□ -2
CCNT1-205ENST00000618666 KRTAP10-10P60014 251 aa2.53□□□□□ -2
CCNT1-205ENST00000618666 ANK2Q01484 3957 aa2.52□□□□□ -2.01
CCNT1-205ENST00000618666 DNHD1Q96M86 4753 aa2.45□□□□□ -2.02
CCNT1-205ENST00000618666 TRRAPQ9Y4A5 3859 aa2.44□□□□□ -2.02
CCNT1-205ENST00000618666 LYSTQ99698 3801 aa2.43□□□□□ -2.02
CCNT1-205ENST00000618666 KRTAP3-2Q9BYR7 98 aa2.43□□□□□ -2.02
CCNT1-205ENST00000618666 KRTAP10-7P60409 375 aaPredicted RBP2.42□□□□□ -2.02
CCNT1-205ENST00000618666 KRTAP10-5P60370 271 aa2.42□□□□□ -2.02
CCNT1-205ENST00000618666 KRTAP3-3Q9BYR6 98 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 178.6 ms