RNA–Protein interactions for RNA: ENST00000618061.4

CBWD1-226, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-226ENST00000618061 CDK2AP2O75956 126 aa8.14□□□□□ -1.11
CBWD1-226ENST00000618061 FAM229BQ4G0N7 80 aa8.13□□□□□ -1.11
CBWD1-226ENST00000618061 C4orf26Q17RF5 130 aa8.12□□□□□ -1.11
CBWD1-226ENST00000618061 Q5XG85 94 aa8.12□□□□□ -1.11
CBWD1-226ENST00000618061 ATP5EP56381 51 aaPredicted RBP8.12□□□□□ -1.11
CBWD1-226ENST00000618061 NDUFS5O43920 106 aa8.11□□□□□ -1.11
CBWD1-226ENST00000618061 DYNC1H1Q14204 4646 aaKnown RBP8.11□□□□□ -1.11
CBWD1-226ENST00000618061 TRAV22A0A0B4J277 110 aa8.1□□□□□ -1.11
CBWD1-226ENST00000618061 ASB16-AS1Q495Z4 193 aa8.1□□□□□ -1.11
CBWD1-226ENST00000618061 SSBP3-AS1Q7Z2R9 100 aa8.1□□□□□ -1.11
CBWD1-226ENST00000618061 C1orf64Q8NEQ6 169 aa8.08□□□□□ -1.12
CBWD1-226ENST00000618061 KRTAP1-4P0C5Y4 121 aa8.08□□□□□ -1.12
CBWD1-226ENST00000618061 FP248Q71RG6 208 aaPredicted RBP8.07□□□□□ -1.12
CBWD1-226ENST00000618061 KMT2CQ8NEZ4 4911 aaKnown RBP8.06□□□□□ -1.12
CBWD1-226ENST00000618061 SMR3BP02814 79 aaPredicted RBP8.05□□□□□ -1.12
CBWD1-226ENST00000618061 CD164Q04900 197 aa8.05□□□□□ -1.12
CBWD1-226ENST00000618061 MRPL34Q9BQ48 92 aaKnown RBP8.05□□□□□ -1.12
CBWD1-226ENST00000618061 RYR2Q92736 4967 aa8.04□□□□□ -1.12
CBWD1-226ENST00000618061 FAT1Q14517 4588 aa8.04□□□□□ -1.12
CBWD1-226ENST00000618061 J3QL48 77 aa8.03□□□□□ -1.12
CBWD1-226ENST00000618061 PRO0628Q9UI54 55 aa8.03□□□□□ -1.12
CBWD1-226ENST00000618061 SMIM26A0A096LP01 95 aa8.03□□□□□ -1.12
CBWD1-226ENST00000618061 PLA2G1BP04054 148 aaKnown RBP8.03□□□□□ -1.12
CBWD1-226ENST00000618061 PCOTHQ58A44 107 aa8.02□□□□□ -1.13
CBWD1-226ENST00000618061 APOBP04114 4563 aaKnown RBP8.02□□□□□ -1.13
CBWD1-226ENST00000618061 MPLKIPQ8TAP9 179 aa8.01□□□□□ -1.13
CBWD1-226ENST00000618061 H3BPC8 53 aa8□□□□□ -1.13
CBWD1-226ENST00000618061 C1orf195Q5TG92 126 aa8□□□□□ -1.13
CBWD1-226ENST00000618061 TP53AIP1Q9HCN2 124 aa8□□□□□ -1.13
CBWD1-226ENST00000618061 KRTAP3-3Q9BYR6 98 aa7.99□□□□□ -1.13
CBWD1-226ENST00000618061 KRTAP3-2Q9BYR7 98 aa7.99□□□□□ -1.13
CBWD1-226ENST00000618061 Q5W150 140 aa7.98□□□□□ -1.13
CBWD1-226ENST00000618061 LINC00336Q6ZUF6 198 aa7.97□□□□□ -1.13
CBWD1-226ENST00000618061 TYMSOSQ8TAI1 123 aa7.97□□□□□ -1.13
CBWD1-226ENST00000618061 CYP4F30PQ9H0H9 118 aa7.97□□□□□ -1.13
CBWD1-226ENST00000618061 A0A1B0GVY2 172 aa7.96□□□□□ -1.14
CBWD1-226ENST00000618061 PRR26Q8N8Z3 221 aa7.95□□□□□ -1.14
CBWD1-226ENST00000618061 RETNLBQ9BQ08 111 aa7.94□□□□□ -1.14
CBWD1-226ENST00000618061 LINC00313P59037 77 aa7.94□□□□□ -1.14
CBWD1-226ENST00000618061 SPANXA2-OT1Q8N9U9 137 aa7.91□□□□□ -1.14
CBWD1-226ENST00000618061 C8orf87E5RJ46 101 aa7.9□□□□□ -1.15
CBWD1-226ENST00000618061 LIMD2Q9BT23 127 aa7.89□□□□□ -1.15
CBWD1-226ENST00000618061 KRTAP13-3Q3SY46 172 aa7.88□□□□□ -1.15
CBWD1-226ENST00000618061 IGLV7-46A0A075B6I9 117 aa7.88□□□□□ -1.15
CBWD1-226ENST00000618061 KRTAP16-1A8MUX0 517 aa7.85□□□□□ -1.15
CBWD1-226ENST00000618061 SPINK1P00995 79 aa7.84□□□□□ -1.15
CBWD1-226ENST00000618061 KRTAP10-4P60372 401 aaPredicted RBP7.84□□□□□ -1.15
CBWD1-226ENST00000618061 RYR3Q15413 4870 aa7.84□□□□□ -1.15
CBWD1-226ENST00000618061 Q8N9P0 234 aaPredicted RBP7.84□□□□□ -1.15
CBWD1-226ENST00000618061 LINC00304Q8N9R0 145 aa7.84□□□□□ -1.15
CBWD1-226ENST00000618061 PKHD1L1Q86WI1 4243 aa7.83□□□□□ -1.16
CBWD1-226ENST00000618061 COA5Q86WW8 74 aa7.82□□□□□ -1.16
CBWD1-226ENST00000618061 LOC101927531A0A1B0GV80 90 aa7.81□□□□□ -1.16
CBWD1-226ENST00000618061 PSPHP1O15172 72 aa7.8□□□□□ -1.16
CBWD1-226ENST00000618061 Q1T7F1 81 aa7.78□□□□□ -1.16
CBWD1-226ENST00000618061 FAM229AH3BQW9 127 aa7.77□□□□□ -1.17
CBWD1-226ENST00000618061 HRES1P13985 223 aa7.76□□□□□ -1.17
CBWD1-226ENST00000618061 HSPG2P98160 4391 aa7.75□□□□□ -1.17
CBWD1-226ENST00000618061 LRP1Q07954 4544 aaKnown RBP7.75□□□□□ -1.17
CBWD1-226ENST00000618061 A8MUN3 132 aa7.73□□□□□ -1.17
CBWD1-226ENST00000618061 BRK1Q8WUW1 75 aa7.73□□□□□ -1.17
CBWD1-226ENST00000618061 C9orf92A6NGG3 77 aa7.72□□□□□ -1.17
CBWD1-226ENST00000618061 IGKV2-30P06310 120 aa7.72□□□□□ -1.17
CBWD1-226ENST00000618061 SPAG11AQ6PDA7 123 aa7.72□□□□□ -1.17
CBWD1-226ENST00000618061 IGKV2D-30A0A075B6S6 120 aa7.71□□□□□ -1.17
CBWD1-226ENST00000618061 RPS29P62273 56 aaKnown RBP7.69□□□□□ -1.18
CBWD1-226ENST00000618061 TNXBP22105 4242 aa7.68□□□□□ -1.18
CBWD1-226ENST00000618061 PRR15LQ9BU68 103 aa7.66□□□□□ -1.18
CBWD1-226ENST00000618061 Q5VV11 94 aa7.64□□□□□ -1.19
CBWD1-226ENST00000618061 PMAIP1Q13794 54 aa7.64□□□□□ -1.19
CBWD1-226ENST00000618061 KRTAP17-1Q9BYP8 105 aa7.63□□□□□ -1.19
CBWD1-226ENST00000618061 RYR1P21817 5038 aa7.62□□□□□ -1.19
CBWD1-226ENST00000618061 FAT3Q8TDW7 4589 aa7.62□□□□□ -1.19
CBWD1-226ENST00000618061 ACYP2P14621 99 aa7.61□□□□□ -1.19
CBWD1-226ENST00000618061 Q5VSD8 79 aa7.61□□□□□ -1.19
CBWD1-226ENST00000618061 DMAC1Q96GE9 116 aa7.61□□□□□ -1.19
CBWD1-226ENST00000618061 Q8N1X5 172 aa7.61□□□□□ -1.19
CBWD1-226ENST00000618061 A8MU10 97 aa7.59□□□□□ -1.19
CBWD1-226ENST00000618061 H3BS24 57 aa7.59□□□□□ -1.19
CBWD1-226ENST00000618061 FLG2Q5D862 2391 aaPredicted RBP7.59□□□□□ -1.19
CBWD1-226ENST00000618061 KIAA1109Q2LD37 5005 aa7.58□□□□□ -1.2
CBWD1-226ENST00000618061 CHKB-CPT1BH3BT56 60 aa7.57□□□□□ -1.2
CBWD1-226ENST00000618061 EPPK1P58107 5090 aaKnown RBP7.56□□□□□ -1.2
CBWD1-226ENST00000618061 C7orf65Q6ZTY9 151 aa7.55□□□□□ -1.2
CBWD1-226ENST00000618061 MYCBP2O75592 4640 aa7.55□□□□□ -1.2
CBWD1-226ENST00000618061 LINC01558Q9Y6Z2 57 aa7.54□□□□□ -1.2
CBWD1-226ENST00000618061 A8MUU9 505 aa7.53□□□□□ -1.2
CBWD1-226ENST00000618061 C20orf166-AS1Q96NR2 134 aa7.53□□□□□ -1.2
CBWD1-226ENST00000618061 KRTAP10-8P60410 259 aa7.51□□□□□ -1.21
CBWD1-226ENST00000618061 Q75L30 129 aa7.5□□□□□ -1.21
CBWD1-226ENST00000618061 A6NED7 52 aa7.48□□□□□ -1.21
CBWD1-226ENST00000618061 SPINK7P58062 85 aa7.45□□□□□ -1.22
CBWD1-226ENST00000618061 DMBT1Q9UGM3 2413 aaPredicted RBP7.45□□□□□ -1.22
CBWD1-226ENST00000618061 LCA10Q71F78 164 aa7.44□□□□□ -1.22
CBWD1-226ENST00000618061 KRTAP3-1Q9BYR8 98 aa7.38□□□□□ -1.23
CBWD1-226ENST00000618061 A0A1B0GU69 56 aa7.37□□□□□ -1.23
CBWD1-226ENST00000618061 MT1HL1P0DM35 61 aa7.37□□□□□ -1.23
CBWD1-226ENST00000618061 SPTSSBQ8NFR3 76 aa7.36□□□□□ -1.23
CBWD1-226ENST00000618061 RBM12B-AS1Q9P1G2 102 aa7.35□□□□□ -1.23
CBWD1-226ENST00000618061 LPAP08519 4548 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms