RNA–Protein interactions for RNA: ENST00000617271.4

PCDH15-231, Transcript of protocadherin related 15, human

APPRIS P3 TSL 5 BASIC

Gene PCDH15, Length 6,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-231	ENST00000617271	LAMA3	Q16787	3333 aa		3.35	□□□□□ -1.87
PCDH15-231	ENST00000617271	MAP1A	P78559	2803 aa	Predicted RBP	3.35	□□□□□ -1.87
PCDH15-231	ENST00000617271	SPEG	Q15772	3267 aa		3.35	□□□□□ -1.87
PCDH15-231	ENST00000617271	CHD7	Q9P2D1	2997 aa		3.34	□□□□□ -1.88
PCDH15-231	ENST00000617271	KRTAP10-6	P60371	365 aa	Predicted RBP	3.32	□□□□□ -1.88
PCDH15-231	ENST00000617271	MKI67	P46013	3256 aa	Known RBP	3.32	□□□□□ -1.88
PCDH15-231	ENST00000617271	SPEN	Q96T58	3664 aa	Known RBP	3.32	□□□□□ -1.88
PCDH15-231	ENST00000617271	MYO15A	Q9UKN7	3530 aa		3.32	□□□□□ -1.88
PCDH15-231	ENST00000617271	PRRC2C	Q9Y520	2896 aa	Known RBP	3.32	□□□□□ -1.88
PCDH15-231	ENST00000617271	NOTCH1	P46531	2555 aa		3.31	□□□□□ -1.88
PCDH15-231	ENST00000617271	MT1HL1	P0DM35	61 aa		3.31	□□□□□ -1.88
PCDH15-231	ENST00000617271	DCHS1	Q96JQ0	3298 aa		3.3	□□□□□ -1.88
PCDH15-231	ENST00000617271	C5orf42	Q9H799	3197 aa		3.3	□□□□□ -1.88
PCDH15-231	ENST00000617271	KRTAP23-1	A1A580	65 aa		3.29	□□□□□ -1.88
PCDH15-231	ENST00000617271	LAMA1	P25391	3075 aa		3.29	□□□□□ -1.88
PCDH15-231	ENST00000617271	VPS13A	Q96RL7	3174 aa		3.28	□□□□□ -1.88
PCDH15-231	ENST00000617271	TRANK1	O15050	2925 aa		3.28	□□□□□ -1.88
PCDH15-231	ENST00000617271	ALMS1	Q8TCU4	4167 aa		3.28	□□□□□ -1.88
PCDH15-231	ENST00000617271	NBEAL2	Q6ZNJ1	2754 aa		3.28	□□□□□ -1.89
PCDH15-231	ENST00000617271	CFAP47	Q6ZTR5	3102 aa		3.28	□□□□□ -1.89
PCDH15-231	ENST00000617271	CRCT1	Q9UGL9	99 aa		3.27	□□□□□ -1.89
PCDH15-231	ENST00000617271	SMG1	Q96Q15	3661 aa	Known RBP	3.26	□□□□□ -1.89
PCDH15-231	ENST00000617271	HUWE1	Q7Z6Z7	4374 aa	Known RBP	3.25	□□□□□ -1.89
PCDH15-231	ENST00000617271	HTT	P42858	3142 aa		3.25	□□□□□ -1.89
PCDH15-231	ENST00000617271	HIVEP1	P15822	2718 aa		3.24	□□□□□ -1.89
PCDH15-231	ENST00000617271	LAMA2	P24043	3122 aa	Known RBP	3.23	□□□□□ -1.89
PCDH15-231	ENST00000617271	KRTAP12-3	P60328	96 aa		3.23	□□□□□ -1.89
PCDH15-231	ENST00000617271	MGA	Q8IWI9	3026 aa		3.22	□□□□□ -1.89
PCDH15-231	ENST00000617271	APC	P25054	2843 aa		3.2	□□□□□ -1.9
PCDH15-231	ENST00000617271	UBR5	O95071	2799 aa	Predicted RBP	3.2	□□□□□ -1.9
PCDH15-231	ENST00000617271	WDFY4	Q6ZS81	3184 aa		3.19	□□□□□ -1.9
PCDH15-231	ENST00000617271	KRTAP3-2	Q9BYR7	98 aa		3.19	□□□□□ -1.9
PCDH15-231	ENST00000617271	LOC400499	M0QZD8	3231 aa		3.19	□□□□□ -1.9
PCDH15-231	ENST00000617271	RELN	P78509	3460 aa		3.19	□□□□□ -1.9
PCDH15-231	ENST00000617271	KRTAP3-3	Q9BYR6	98 aa		3.18	□□□□□ -1.9
PCDH15-231	ENST00000617271	ASPM	Q8IZT6	3477 aa		3.18	□□□□□ -1.9
PCDH15-231	ENST00000617271	ITPR1	Q14643	2758 aa		3.17	□□□□□ -1.9
PCDH15-231	ENST00000617271	ZFHX4	Q86UP3	3567 aa		3.17	□□□□□ -1.9
PCDH15-231	ENST00000617271	TENM4	Q6N022	2769 aa		3.17	□□□□□ -1.9
PCDH15-231	ENST00000617271	KRTAP10-4	P60372	401 aa	Predicted RBP	3.16	□□□□□ -1.9
PCDH15-231	ENST00000617271	KRTAP8-1	Q8IUC2	63 aa		3.16	□□□□□ -1.9
PCDH15-231	ENST00000617271	LCE3A	Q5TA76	89 aa		3.15	□□□□□ -1.9
PCDH15-231	ENST00000617271	LAMA5	O15230	3695 aa		3.15	□□□□□ -1.9
PCDH15-231	ENST00000617271	UTP20	O75691	2785 aa	Known RBP	3.15	□□□□□ -1.91
PCDH15-231	ENST00000617271	CSMD1	Q96PZ7	3565 aa		3.14	□□□□□ -1.91
PCDH15-231	ENST00000617271	TRIO	O75962	3097 aa		3.14	□□□□□ -1.91
PCDH15-231	ENST00000617271	FREM2	Q5SZK8	3169 aa		3.13	□□□□□ -1.91
PCDH15-231	ENST00000617271	FRYL	O94915	3013 aa		3.13	□□□□□ -1.91
PCDH15-231	ENST00000617271	KRTAP4-5	Q9BYR2	181 aa		3.11	□□□□□ -1.91
PCDH15-231	ENST00000617271	KRTAP17-1	Q9BYP8	105 aa		3.11	□□□□□ -1.91
PCDH15-231	ENST00000617271	TENM2	Q9NT68	2774 aa		3.1	□□□□□ -1.91
PCDH15-231	ENST00000617271	DSP	P15924	2871 aa	Known RBP	3.1	□□□□□ -1.91
PCDH15-231	ENST00000617271	FRY	Q5TBA9	3013 aa		3.08	□□□□□ -1.92
PCDH15-231	ENST00000617271	LRBA	P50851	2863 aa		3.08	□□□□□ -1.92
PCDH15-231	ENST00000617271	NIPBL	Q6KC79	2804 aa	eCLIP	3.07	□□□□□ -1.92
PCDH15-231	ENST00000617271	REV3L	O60673	3130 aa		3.06	□□□□□ -1.92
PCDH15-231	ENST00000617271	TG	P01266	2768 aa		3.05	□□□□□ -1.92
PCDH15-231	ENST00000617271	KRTAP10-5	P60370	271 aa		3.04	□□□□□ -1.92
PCDH15-231	ENST00000617271	CELSR3	Q9NYQ7	3312 aa		3.04	□□□□□ -1.92
PCDH15-231	ENST00000617271	NBEA	Q8NFP9	2946 aa		3.04	□□□□□ -1.92
PCDH15-231	ENST00000617271	PRUNE2	Q8WUY3	3088 aa		3.04	□□□□□ -1.92
PCDH15-231	ENST00000617271	AKAP9	Q99996	3911 aa		3.03	□□□□□ -1.92
PCDH15-231	ENST00000617271	ANK3	Q12955	4377 aa	Known RBP	3.02	□□□□□ -1.93
PCDH15-231	ENST00000617271	TNRC18	O15417	2968 aa	Predicted RBP	3.02	□□□□□ -1.93
PCDH15-231	ENST00000617271	DNAH2	Q9P225	4427 aa		3.01	□□□□□ -1.93
PCDH15-231	ENST00000617271	EYS	Q5T1H1	3165 aa		2.99	□□□□□ -1.93
PCDH15-231	ENST00000617271	CRYBG3	Q68DQ2	2970 aa		2.99	□□□□□ -1.93
PCDH15-231	ENST00000617271	BOD1L1	Q8NFC6	3051 aa		2.99	□□□□□ -1.93
PCDH15-231	ENST00000617271	LOR	P23490	312 aa	Predicted RBP	2.98	□□□□□ -1.93
PCDH15-231	ENST00000617271	MUC3A	Q02505	3323 aa		2.98	□□□□□ -1.93
PCDH15-231	ENST00000617271	NBPF19	A0A087WUL8	3843 aa		2.97	□□□□□ -1.93
PCDH15-231	ENST00000617271	KALRN	O60229	2985 aa		2.97	□□□□□ -1.93
PCDH15-231	ENST00000617271	TENM1	Q9UKZ4	2725 aa		2.97	□□□□□ -1.93
PCDH15-231	ENST00000617271	MT1H	P80294	61 aa		2.96	□□□□□ -1.94
PCDH15-231	ENST00000617271	FLNC	Q14315	2725 aa		2.95	□□□□□ -1.94
PCDH15-231	ENST00000617271	KRTAP19-4	Q3LI73	84 aa		2.95	□□□□□ -1.94
PCDH15-231	ENST00000617271	KRTAP10-7	P60409	375 aa	Predicted RBP	2.95	□□□□□ -1.94
PCDH15-231	ENST00000617271	ATM	Q13315	3056 aa		2.94	□□□□□ -1.94
PCDH15-231	ENST00000617271	TENM3	Q9P273	2699 aa		2.94	□□□□□ -1.94
PCDH15-231	ENST00000617271	SVEP1	Q4LDE5	3571 aa		2.94	□□□□□ -1.94
PCDH15-231	ENST00000617271	ZZEF1	O43149	2961 aa		2.94	□□□□□ -1.94
PCDH15-231	ENST00000617271	HRNR	Q86YZ3	2850 aa	Predicted RBP	2.93	□□□□□ -1.94
PCDH15-231	ENST00000617271	DMXL2	Q8TDJ6	3036 aa		2.91	□□□□□ -1.94
PCDH15-231	ENST00000617271	TACC2	O95359	2948 aa		2.91	□□□□□ -1.94
PCDH15-231	ENST00000617271	COL12A1	Q99715	3063 aa		2.91	□□□□□ -1.94
PCDH15-231	ENST00000617271	CSMD3	Q7Z407	3707 aa		2.9	□□□□□ -1.95
PCDH15-231	ENST00000617271	SPRR2G	Q9BYE4	73 aa		2.9	□□□□□ -1.95
PCDH15-231	ENST00000617271	MT2A	P02795	61 aa		2.89	□□□□□ -1.95
PCDH15-231	ENST00000617271	DNAH1	Q9P2D7	4330 aa		2.89	□□□□□ -1.95
PCDH15-231	ENST00000617271	SPRR2F	Q96RM1	72 aa		2.88	□□□□□ -1.95
PCDH15-231	ENST00000617271	OTOG	Q6ZRI0	2925 aa		2.88	□□□□□ -1.95
PCDH15-231	ENST00000617271	PDZD2	O15018	2839 aa		2.87	□□□□□ -1.95
PCDH15-231	ENST00000617271	DCHS2	Q6V1P9	2916 aa		2.85	□□□□□ -1.95
PCDH15-231	ENST00000617271	CSMD2	Q7Z408	3487 aa		2.84	□□□□□ -1.95
PCDH15-231	ENST00000617271	CELSR1	Q9NYQ6	3014 aa		2.84	□□□□□ -1.95
PCDH15-231	ENST00000617271	KRTAP4-1	Q9BYQ7	146 aa		2.84	□□□□□ -1.96
PCDH15-231	ENST00000617271	ADGRG4	Q8IZF6	3080 aa		2.83	□□□□□ -1.96
PCDH15-231	ENST00000617271	NF1	P21359	2839 aa		2.83	□□□□□ -1.96
PCDH15-231	ENST00000617271	CELSR2	Q9HCU4	2923 aa		2.83	□□□□□ -1.96
PCDH15-231	ENST00000617271	CUBN	O60494	3623 aa		2.83	□□□□□ -1.96

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