RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 Q8N9L7 120 aa8.47□□□□□ -1.05
CBWD1-225ENST00000616944 FP248Q71RG6 208 aaPredicted RBP8.46□□□□□ -1.06
CBWD1-225ENST00000616944 PRR15Q8IV56 129 aa8.46□□□□□ -1.06
CBWD1-225ENST00000616944 A0A1B0GVX0 72 aa8.45□□□□□ -1.06
CBWD1-225ENST00000616944 NDUFB1O75438 58 aa8.43□□□□□ -1.06
CBWD1-225ENST00000616944 IGHV6-1A0A0B4J1U7 121 aa8.41□□□□□ -1.06
CBWD1-225ENST00000616944 IMUPQ9GZP8 106 aa8.4□□□□□ -1.06
CBWD1-225ENST00000616944 NOTCH2NLQ7Z3S9 236 aa8.4□□□□□ -1.07
CBWD1-225ENST00000616944 HMCN2Q8NDA2 5059 aa8.4□□□□□ -1.07
CBWD1-225ENST00000616944 HIST1H4AP62805 103 aaKnown RBP8.39□□□□□ -1.07
CBWD1-225ENST00000616944 IGLV7-46A0A075B6I9 117 aa8.38□□□□□ -1.07
CBWD1-225ENST00000616944 A0A087WVE0 104 aa8.38□□□□□ -1.07
CBWD1-225ENST00000616944 MMP24-AS1A0A0U1RRL7 71 aa8.38□□□□□ -1.07
CBWD1-225ENST00000616944 C8orf17Q9NRJ1 99 aa8.37□□□□□ -1.07
CBWD1-225ENST00000616944 C8orf87E5RJ46 101 aa8.36□□□□□ -1.07
CBWD1-225ENST00000616944 PRR4Q16378 134 aa8.36□□□□□ -1.07
CBWD1-225ENST00000616944 KRTAP13-3Q3SY46 172 aa8.35□□□□□ -1.07
CBWD1-225ENST00000616944 LINC00313P59037 77 aa8.34□□□□□ -1.07
CBWD1-225ENST00000616944 KRTAP16-1A8MUX0 517 aa8.33□□□□□ -1.08
CBWD1-225ENST00000616944 HCG22E2RYF7 251 aa8.33□□□□□ -1.08
CBWD1-225ENST00000616944 TPRXLQ17RH7 258 aa8.32□□□□□ -1.08
CBWD1-225ENST00000616944 C9orf92A6NGG3 77 aa8.31□□□□□ -1.08
CBWD1-225ENST00000616944 hDV103S1A0JD37 113 aa8.3□□□□□ -1.08
CBWD1-225ENST00000616944 WFDC13Q8IUB5 93 aa8.3□□□□□ -1.08
CBWD1-225ENST00000616944 CASC2Q6XLA1 102 aa8.29□□□□□ -1.08
CBWD1-225ENST00000616944 TMEM254Q8TBM7 123 aa8.29□□□□□ -1.08
CBWD1-225ENST00000616944 LPAP08519 4548 aa8.27□□□□□ -1.09
CBWD1-225ENST00000616944 MRPL34Q9BQ48 92 aaKnown RBP8.25□□□□□ -1.09
CBWD1-225ENST00000616944 FAM236AA0A1B0GUQ0 79 aa8.25□□□□□ -1.09
CBWD1-225ENST00000616944 FAM236BA0A1B0GV22 79 aa8.25□□□□□ -1.09
CBWD1-225ENST00000616944 Q8N9P0 234 aaPredicted RBP8.25□□□□□ -1.09
CBWD1-225ENST00000616944 LRP2P98164 4655 aa8.23□□□□□ -1.09
CBWD1-225ENST00000616944 XP32Q5T750 250 aa8.23□□□□□ -1.09
CBWD1-225ENST00000616944 C20orf166-AS1Q96NR2 134 aa8.23□□□□□ -1.09
CBWD1-225ENST00000616944 A8MUU9 505 aa8.21□□□□□ -1.1
CBWD1-225ENST00000616944 Q75L30 129 aa8.18□□□□□ -1.1
CBWD1-225ENST00000616944 UBR4Q5T4S7 5183 aa8.18□□□□□ -1.1
CBWD1-225ENST00000616944 OCR1Q9BZK8 76 aa8.16□□□□□ -1.1
CBWD1-225ENST00000616944 LCE2DQ5TA82 110 aaPredicted RBP8.15□□□□□ -1.1
CBWD1-225ENST00000616944 SCGB1A1P11684 91 aa8.14□□□□□ -1.11
CBWD1-225ENST00000616944 RPL37P61927 97 aaKnown RBP8.14□□□□□ -1.11
CBWD1-225ENST00000616944 ATOX1O00244 68 aa8.14□□□□□ -1.11
CBWD1-225ENST00000616944 NDUFS5O43920 106 aa8.14□□□□□ -1.11
CBWD1-225ENST00000616944 TP53AIP1Q9HCN2 124 aa8.12□□□□□ -1.11
CBWD1-225ENST00000616944 Q5W150 140 aa8.09□□□□□ -1.11
CBWD1-225ENST00000616944 SMIM20Q8N5G0 67 aa8.08□□□□□ -1.12
CBWD1-225ENST00000616944 UQCRQO14949 82 aa8.07□□□□□ -1.12
CBWD1-225ENST00000616944 ZCCHC13Q8WW36 166 aaKnown RBP8.07□□□□□ -1.12
CBWD1-225ENST00000616944 TRAV7A0A075B6U4 112 aa8.07□□□□□ -1.12
CBWD1-225ENST00000616944 TRAV22A0A0B4J277 110 aa8.03□□□□□ -1.12
CBWD1-225ENST00000616944 ATP11AUNQ6ZP68 121 aa8.03□□□□□ -1.12
CBWD1-225ENST00000616944 SERP2Q8N6R1 65 aa8.03□□□□□ -1.12
CBWD1-225ENST00000616944 PCOTHQ58A44 107 aa8□□□□□ -1.13
CBWD1-225ENST00000616944 C5orf47Q569G3 176 aa8□□□□□ -1.13
CBWD1-225ENST00000616944 H0Y9P7 68 aa7.99□□□□□ -1.13
CBWD1-225ENST00000616944 ANAPC13Q9BS18 74 aa7.99□□□□□ -1.13
CBWD1-225ENST00000616944 SEC61BP60468 96 aaKnown RBP7.98□□□□□ -1.13
CBWD1-225ENST00000616944 MUC17Q685J3 4493 aa7.97□□□□□ -1.13
CBWD1-225ENST00000616944 RNF213Q63HN8 5207 aa7.96□□□□□ -1.14
CBWD1-225ENST00000616944 COX7CP15954 63 aa7.96□□□□□ -1.14
CBWD1-225ENST00000616944 MP68P56378 58 aa7.94□□□□□ -1.14
CBWD1-225ENST00000616944 H3BPC8 53 aa7.92□□□□□ -1.14
CBWD1-225ENST00000616944 MUC2Q02817 5179 aa7.92□□□□□ -1.14
CBWD1-225ENST00000616944 IGKV2-30P06310 120 aa7.92□□□□□ -1.14
CBWD1-225ENST00000616944 LINC00208Q96KT6 92 aa7.92□□□□□ -1.14
CBWD1-225ENST00000616944 A0A0U1RQV1 116 aa7.91□□□□□ -1.14
CBWD1-225ENST00000616944 C1orf64Q8NEQ6 169 aa7.91□□□□□ -1.14
CBWD1-225ENST00000616944 LOC101927531A0A1B0GV80 90 aa7.9□□□□□ -1.14
CBWD1-225ENST00000616944 IGKV2D-30A0A075B6S6 120 aa7.89□□□□□ -1.15
CBWD1-225ENST00000616944 SPINK7P58062 85 aa7.89□□□□□ -1.15
CBWD1-225ENST00000616944 C7orf65Q6ZTY9 151 aa7.89□□□□□ -1.15
CBWD1-225ENST00000616944 C20orf197Q8N268 126 aa7.89□□□□□ -1.15
CBWD1-225ENST00000616944 KRTAP4-1Q9BYQ7 146 aa7.89□□□□□ -1.15
CBWD1-225ENST00000616944 CYP4F30PQ9H0H9 118 aa7.88□□□□□ -1.15
CBWD1-225ENST00000616944 KLKP1Q107X0 134 aa7.87□□□□□ -1.15
CBWD1-225ENST00000616944 SNURFQ9Y675 71 aa7.85□□□□□ -1.15
CBWD1-225ENST00000616944 CCDC179H3BU77 68 aa7.84□□□□□ -1.15
CBWD1-225ENST00000616944 CYSTM1Q9H1C7 97 aa7.81□□□□□ -1.16
CBWD1-225ENST00000616944 HRES1P13985 223 aa7.8□□□□□ -1.16
CBWD1-225ENST00000616944 PCP4P48539 62 aa7.78□□□□□ -1.16
CBWD1-225ENST00000616944 MPLKIPQ8TAP9 179 aa7.76□□□□□ -1.17
CBWD1-225ENST00000616944 H7BZZ5 65 aa7.73□□□□□ -1.17
CBWD1-225ENST00000616944 NDUFC1O43677 76 aa7.71□□□□□ -1.17
CBWD1-225ENST00000616944 C4orf26Q17RF5 130 aa7.71□□□□□ -1.17
CBWD1-225ENST00000616944 KRTAP19-2Q3LHN2 52 aa7.68□□□□□ -1.18
CBWD1-225ENST00000616944 KRTAP3-3Q9BYR6 98 aa7.68□□□□□ -1.18
CBWD1-225ENST00000616944 KRTAP3-2Q9BYR7 98 aa7.68□□□□□ -1.18
CBWD1-225ENST00000616944 COX6B2Q6YFQ2 88 aa7.66□□□□□ -1.18
CBWD1-225ENST00000616944 SPANXA2-OT1Q8N9U9 137 aa7.66□□□□□ -1.18
CBWD1-225ENST00000616944 KRTAP3-1Q9BYR8 98 aa7.65□□□□□ -1.18
CBWD1-225ENST00000616944 RBM12B-AS1Q9P1G2 102 aa7.64□□□□□ -1.19
CBWD1-225ENST00000616944 DMAC1Q96GE9 116 aa7.6□□□□□ -1.19
CBWD1-225ENST00000616944 FAT4Q6V0I7 4981 aa7.6□□□□□ -1.19
CBWD1-225ENST00000616944 A8MUN3 132 aa7.57□□□□□ -1.2
CBWD1-225ENST00000616944 LCE2CQ5TA81 110 aa7.57□□□□□ -1.2
CBWD1-225ENST00000616944 TMEM258P61165 79 aa7.56□□□□□ -1.2
CBWD1-225ENST00000616944 FAM236DA0A1B0GTK5 79 aa7.55□□□□□ -1.2
CBWD1-225ENST00000616944 FAM236CP0DP71 79 aa7.55□□□□□ -1.2
CBWD1-225ENST00000616944 FLGP20930 4061 aaPredicted RBP7.53□□□□□ -1.2
CBWD1-225ENST00000616944 H1FX-AS1Q4G0G2 97 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms