RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 KRTAP21-3Q3LHN1 58 aa9.96□□□□□ -0.81
GABPB1-212ENST00000615671 VCANP13611 3396 aa9.95□□□□□ -0.82
GABPB1-212ENST00000615671 KALRNO60229 2985 aa9.95□□□□□ -0.82
GABPB1-212ENST00000615671 REV3LO60673 3130 aa9.92□□□□□ -0.82
GABPB1-212ENST00000615671 UBR5O95071 2799 aaPredicted RBP9.9□□□□□ -0.82
GABPB1-212ENST00000615671 KRTAP1-4P0C5Y4 121 aa9.87□□□□□ -0.83
GABPB1-212ENST00000615671 DMXL2Q8TDJ6 3036 aa9.84□□□□□ -0.83
GABPB1-212ENST00000615671 LRBAP50851 2863 aa9.83□□□□□ -0.84
GABPB1-212ENST00000615671 SPEGQ15772 3267 aa9.82□□□□□ -0.84
GABPB1-212ENST00000615671 NSD1Q96L73 2696 aaPredicted RBP9.82□□□□□ -0.84
GABPB1-212ENST00000615671 TACC2O95359 2948 aa9.81□□□□□ -0.84
GABPB1-212ENST00000615671 LAMA1P25391 3075 aa9.78□□□□□ -0.84
GABPB1-212ENST00000615671 APCP25054 2843 aa9.78□□□□□ -0.84
GABPB1-212ENST00000615671 UTP20O75691 2785 aaKnown RBP9.73□□□□□ -0.85
GABPB1-212ENST00000615671 HIVEP1P15822 2718 aa9.73□□□□□ -0.85
GABPB1-212ENST00000615671 ATMQ13315 3056 aa9.73□□□□□ -0.85
GABPB1-212ENST00000615671 TPRXLQ17RH7 258 aa9.72□□□□□ -0.85
GABPB1-212ENST00000615671 BOD1L1Q8NFC6 3051 aa9.72□□□□□ -0.85
GABPB1-212ENST00000615671 ITPR1Q14643 2758 aa9.72□□□□□ -0.85
GABPB1-212ENST00000615671 SPTBN5Q9NRC6 3674 aaKnown RBP9.71□□□□□ -0.86
GABPB1-212ENST00000615671 PRO2289Q9P1D8 64 aa9.71□□□□□ -0.86
GABPB1-212ENST00000615671 ASH1LQ9NR48 2969 aaKnown RBP9.71□□□□□ -0.86
GABPB1-212ENST00000615671 COL12A1Q99715 3063 aa9.7□□□□□ -0.86
GABPB1-212ENST00000615671 KMT2BQ9UMN6 2715 aaPredicted RBP9.69□□□□□ -0.86
GABPB1-212ENST00000615671 H0YAA0 97 aa9.67□□□□□ -0.86
GABPB1-212ENST00000615671 PP632Q6XCG6 107 aa9.65□□□□□ -0.86
GABPB1-212ENST00000615671 USP34Q70CQ2 3546 aa9.65□□□□□ -0.86
GABPB1-212ENST00000615671 FRYLO94915 3013 aa9.61□□□□□ -0.87
GABPB1-212ENST00000615671 P0C880 135 aa9.6□□□□□ -0.87
GABPB1-212ENST00000615671 KRTAP13-3Q3SY46 172 aa9.58□□□□□ -0.88
GABPB1-212ENST00000615671 ADGRG4Q8IZF6 3080 aa9.54□□□□□ -0.88
GABPB1-212ENST00000615671 EYSQ5T1H1 3165 aa9.52□□□□□ -0.89
GABPB1-212ENST00000615671 TENM4Q6N022 2769 aa9.45□□□□□ -0.9
GABPB1-212ENST00000615671 ZZEF1O43149 2961 aa9.41□□□□□ -0.9
GABPB1-212ENST00000615671 CELSR2Q9HCU4 2923 aa9.36□□□□□ -0.91
GABPB1-212ENST00000615671 NBEAQ8NFP9 2946 aa9.32□□□□□ -0.92
GABPB1-212ENST00000615671 MYO15AQ9UKN7 3530 aa9.29□□□□□ -0.92
GABPB1-212ENST00000615671 ASPMQ8IZT6 3477 aa9.28□□□□□ -0.92
GABPB1-212ENST00000615671 KRTAP12-2P59991 146 aa9.26□□□□□ -0.93
GABPB1-212ENST00000615671 FLNCQ14315 2725 aa9.25□□□□□ -0.93
GABPB1-212ENST00000615671 DCHS2Q6V1P9 2916 aa9.24□□□□□ -0.93
GABPB1-212ENST00000615671 TENM2Q9NT68 2774 aa9.23□□□□□ -0.93
GABPB1-212ENST00000615671 NBPF19A0A087WUL8 3843 aa9.17□□□□□ -0.94
GABPB1-212ENST00000615671 DMXL1Q9Y485 3027 aa9.17□□□□□ -0.94
GABPB1-212ENST00000615671 WDFY3Q8IZQ1 3526 aa9.17□□□□□ -0.94
GABPB1-212ENST00000615671 TNRC18O15417 2968 aaPredicted RBP9.15□□□□□ -0.95
GABPB1-212ENST00000615671 TENM1Q9UKZ4 2725 aa9.14□□□□□ -0.95
GABPB1-212ENST00000615671 LOC400499M0QZD8 3231 aa9.08□□□□□ -0.96
GABPB1-212ENST00000615671 DCHS1Q96JQ0 3298 aa9.05□□□□□ -0.96
GABPB1-212ENST00000615671 CELSR1Q9NYQ6 3014 aa9.05□□□□□ -0.96
GABPB1-212ENST00000615671 NIPBLQ6KC79 2804 aaeCLIP8.99□□□□□ -0.97
GABPB1-212ENST00000615671 RELNP78509 3460 aa8.98□□□□□ -0.97
GABPB1-212ENST00000615671 KRTAP13-4Q3LI77 160 aa8.98□□□□□ -0.97
GABPB1-212ENST00000615671 KRTAP15-1Q3LI76 137 aa8.97□□□□□ -0.97
GABPB1-212ENST00000615671 NF1P21359 2839 aa8.96□□□□□ -0.97
GABPB1-212ENST00000615671 CRCT1Q9UGL9 99 aa8.96□□□□□ -0.98
GABPB1-212ENST00000615671 HRNRQ86YZ3 2850 aaPredicted RBP8.94□□□□□ -0.98
GABPB1-212ENST00000615671 FBN2P35556 2912 aa8.93□□□□□ -0.98
GABPB1-212ENST00000615671 ZANQ9Y493 2812 aa8.93□□□□□ -0.98
GABPB1-212ENST00000615671 KRTAP12-1P59990 96 aa8.92□□□□□ -0.98
GABPB1-212ENST00000615671 TGP01266 2768 aa8.92□□□□□ -0.98
GABPB1-212ENST00000615671 ZFHX4Q86UP3 3567 aa8.91□□□□□ -0.98
GABPB1-212ENST00000615671 CSMD1Q96PZ7 3565 aa8.87□□□□□ -0.99
GABPB1-212ENST00000615671 TENM3Q9P273 2699 aa8.84□□□□□ -0.99
GABPB1-212ENST00000615671 KRTAP3-1Q9BYR8 98 aa8.78□□□□□ -1
GABPB1-212ENST00000615671 PKD1L1Q8TDX9 2849 aa8.78□□□□□ -1
GABPB1-212ENST00000615671 LAMA5O15230 3695 aa8.78□□□□□ -1
GABPB1-212ENST00000615671 VWFP04275 2813 aa8.74□□□□□ -1.01
GABPB1-212ENST00000615671 ZFHX3Q15911 3703 aa8.58□□□□□ -1.04
GABPB1-212ENST00000615671 PDZD2O15018 2839 aa8.56□□□□□ -1.04
GABPB1-212ENST00000615671 MXRA5Q9NR99 2828 aa8.54□□□□□ -1.04
GABPB1-212ENST00000615671 ANK3Q12955 4377 aaKnown RBP8.53□□□□□ -1.04
GABPB1-212ENST00000615671 KRTAP4-5Q9BYR2 181 aa8.53□□□□□ -1.04
GABPB1-212ENST00000615671 SMG1Q96Q15 3661 aaKnown RBP8.5□□□□□ -1.05
GABPB1-212ENST00000615671 KRTAP10-6P60371 365 aaPredicted RBP8.47□□□□□ -1.05
GABPB1-212ENST00000615671 KRTAP10-12P60413 245 aa8.46□□□□□ -1.06
GABPB1-212ENST00000615671 DMDP11532 3685 aa8.44□□□□□ -1.06
GABPB1-212ENST00000615671 MT1HL1P0DM35 61 aa8.43□□□□□ -1.06
GABPB1-212ENST00000615671 SVEP1Q4LDE5 3571 aa8.38□□□□□ -1.07
GABPB1-212ENST00000615671 SPENQ96T58 3664 aaKnown RBP8.37□□□□□ -1.07
GABPB1-212ENST00000615671 CSMD2Q7Z408 3487 aa8.34□□□□□ -1.07
GABPB1-212ENST00000615671 CUBNO60494 3623 aa8.25□□□□□ -1.09
GABPB1-212ENST00000615671 HUWE1Q7Z6Z7 4374 aaKnown RBP8.23□□□□□ -1.09
GABPB1-212ENST00000615671 FBN1P35555 2871 aaKnown RBP8.17□□□□□ -1.1
GABPB1-212ENST00000615671 TRRAPQ9Y4A5 3859 aa8.17□□□□□ -1.1
GABPB1-212ENST00000615671 KRTAP3-3Q9BYR6 98 aa8.16□□□□□ -1.1
GABPB1-212ENST00000615671 LCE3AQ5TA76 89 aa8.15□□□□□ -1.11
GABPB1-212ENST00000615671 KRTAP12-3P60328 96 aa8.14□□□□□ -1.11
GABPB1-212ENST00000615671 KRTAP3-2Q9BYR7 98 aa8.12□□□□□ -1.11
GABPB1-212ENST00000615671 LORP23490 312 aaPredicted RBP8.09□□□□□ -1.11
GABPB1-212ENST00000615671 MUC3AQ02505 3323 aa8.09□□□□□ -1.11
GABPB1-212ENST00000615671 FBN3Q75N90 2809 aa8.09□□□□□ -1.11
GABPB1-212ENST00000615671 MEGF8Q7Z7M0 2845 aa8.09□□□□□ -1.11
GABPB1-212ENST00000615671 ALMS1Q8TCU4 4167 aa8.08□□□□□ -1.12
GABPB1-212ENST00000615671 SRRM2Q9UQ35 2752 aaKnown RBP8.07□□□□□ -1.12
GABPB1-212ENST00000615671 OTOGQ6ZRI0 2925 aa8.04□□□□□ -1.12
GABPB1-212ENST00000615671 KRTAP8-1Q8IUC2 63 aa8□□□□□ -1.13
GABPB1-212ENST00000615671 KRTAP10-5P60370 271 aa7.99□□□□□ -1.13
GABPB1-212ENST00000615671 INE1O15225 51 aa7.98□□□□□ -1.13
GABPB1-212ENST00000615671 KRTAP10-4P60372 401 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms