RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 RANBP2P49792 3224 aaKnown RBP2.41□□□□□ -2.02
CHD9-221ENST00000615216 HRNRQ86YZ3 2850 aaPredicted RBP2.41□□□□□ -2.02
CHD9-221ENST00000615216 PRO2289Q9P1D8 64 aa2.39□□□□□ -2.03
CHD9-221ENST00000615216 P0C880 135 aa2.39□□□□□ -2.03
CHD9-221ENST00000615216 KRTAP10-8P60410 259 aa2.38□□□□□ -2.03
CHD9-221ENST00000615216 USP34Q70CQ2 3546 aa2.38□□□□□ -2.03
CHD9-221ENST00000615216 TACC2O95359 2948 aa2.37□□□□□ -2.03
CHD9-221ENST00000615216 KRTAP13-3Q3SY46 172 aa2.36□□□□□ -2.03
CHD9-221ENST00000615216 LAMA3Q16787 3333 aa2.35□□□□□ -2.03
CHD9-221ENST00000615216 ZZEF1O43149 2961 aa2.35□□□□□ -2.03
CHD9-221ENST00000615216 TENM1Q9UKZ4 2725 aa2.35□□□□□ -2.03
CHD9-221ENST00000615216 CELSR2Q9HCU4 2923 aa2.35□□□□□ -2.03
CHD9-221ENST00000615216 LAMA1P25391 3075 aa2.35□□□□□ -2.03
CHD9-221ENST00000615216 NBEAQ8NFP9 2946 aa2.34□□□□□ -2.03
CHD9-221ENST00000615216 TGP01266 2768 aa2.34□□□□□ -2.03
CHD9-221ENST00000615216 XIRP2A4UGR9 3374 aa2.34□□□□□ -2.04
CHD9-221ENST00000615216 ZANQ9Y493 2812 aa2.34□□□□□ -2.04
CHD9-221ENST00000615216 SPTBN5Q9NRC6 3674 aaKnown RBP2.33□□□□□ -2.04
CHD9-221ENST00000615216 TNRC18O15417 2968 aaPredicted RBP2.33□□□□□ -2.04
CHD9-221ENST00000615216 CRYBG3Q68DQ2 2970 aa2.33□□□□□ -2.04
CHD9-221ENST00000615216 ASH1LQ9NR48 2969 aaKnown RBP2.33□□□□□ -2.04
CHD9-221ENST00000615216 UNC80Q8N2C7 3258 aa2.32□□□□□ -2.04
CHD9-221ENST00000615216 DNAH14Q0VDD8 3507 aa2.32□□□□□ -2.04
CHD9-221ENST00000615216 KRTAP10-10P60014 251 aa2.32□□□□□ -2.04
CHD9-221ENST00000615216 A0A1B0GVY2 172 aa2.32□□□□□ -2.04
CHD9-221ENST00000615216 NF1P21359 2839 aa2.32□□□□□ -2.04
CHD9-221ENST00000615216 COL12A1Q99715 3063 aa2.31□□□□□ -2.04
CHD9-221ENST00000615216 CDH23Q9H251 3354 aa2.31□□□□□ -2.04
CHD9-221ENST00000615216 BRCA2P51587 3418 aa2.31□□□□□ -2.04
CHD9-221ENST00000615216 DCHS2Q6V1P9 2916 aa2.31□□□□□ -2.04
CHD9-221ENST00000615216 CELSR3Q9NYQ7 3312 aa2.31□□□□□ -2.04
CHD9-221ENST00000615216 ATMQ13315 3056 aa2.3□□□□□ -2.04
CHD9-221ENST00000615216 TENM4Q6N022 2769 aa2.3□□□□□ -2.04
CHD9-221ENST00000615216 DMXL2Q8TDJ6 3036 aa2.3□□□□□ -2.04
CHD9-221ENST00000615216 BOD1L1Q8NFC6 3051 aa2.29□□□□□ -2.04
CHD9-221ENST00000615216 ADGRG4Q8IZF6 3080 aa2.29□□□□□ -2.04
CHD9-221ENST00000615216 FBN2P35556 2912 aa2.29□□□□□ -2.04
CHD9-221ENST00000615216 COL6A3P12111 3177 aa2.28□□□□□ -2.04
CHD9-221ENST00000615216 KRTAP13-4Q3LI77 160 aa2.28□□□□□ -2.04
CHD9-221ENST00000615216 TENM3Q9P273 2699 aa2.28□□□□□ -2.05
CHD9-221ENST00000615216 MXRA5Q9NR99 2828 aa2.26□□□□□ -2.05
CHD9-221ENST00000615216 KRTAP12-2P59991 146 aa2.26□□□□□ -2.05
CHD9-221ENST00000615216 FREM2Q5SZK8 3169 aa2.26□□□□□ -2.05
CHD9-221ENST00000615216 CELSR1Q9NYQ6 3014 aa2.25□□□□□ -2.05
CHD9-221ENST00000615216 SZT2Q5T011 3432 aa2.23□□□□□ -2.05
CHD9-221ENST00000615216 EYSQ5T1H1 3165 aa2.23□□□□□ -2.05
CHD9-221ENST00000615216 VCANP13611 3396 aa2.23□□□□□ -2.05
CHD9-221ENST00000615216 KRTAP12-1P59990 96 aa2.22□□□□□ -2.05
CHD9-221ENST00000615216 DMXL1Q9Y485 3027 aa2.21□□□□□ -2.06
CHD9-221ENST00000615216 REV3LO60673 3130 aa2.21□□□□□ -2.06
CHD9-221ENST00000615216 NBPF19A0A087WUL8 3843 aa2.2□□□□□ -2.06
CHD9-221ENST00000615216 PDZD2O15018 2839 aa2.19□□□□□ -2.06
CHD9-221ENST00000615216 TENM2Q9NT68 2774 aa2.18□□□□□ -2.06
CHD9-221ENST00000615216 CFAP47Q6ZTR5 3102 aa2.17□□□□□ -2.06
CHD9-221ENST00000615216 KRTAP3-1Q9BYR8 98 aa2.16□□□□□ -2.06
CHD9-221ENST00000615216 ALMS1Q8TCU4 4167 aa2.16□□□□□ -2.06
CHD9-221ENST00000615216 KRTAP15-1Q3LI76 137 aa2.16□□□□□ -2.06
CHD9-221ENST00000615216 SPEGQ15772 3267 aa2.15□□□□□ -2.07
CHD9-221ENST00000615216 VWFP04275 2813 aa2.14□□□□□ -2.07
CHD9-221ENST00000615216 AKAP9Q99996 3911 aa2.14□□□□□ -2.07
CHD9-221ENST00000615216 KRTAP19-4Q3LI73 84 aa2.14□□□□□ -2.07
CHD9-221ENST00000615216 INE1O15225 51 aa2.13□□□□□ -2.07
CHD9-221ENST00000615216 KRTAP10-6P60371 365 aaPredicted RBP2.13□□□□□ -2.07
CHD9-221ENST00000615216 PKD1L1Q8TDX9 2849 aa2.12□□□□□ -2.07
CHD9-221ENST00000615216 WDFY3Q8IZQ1 3526 aa2.11□□□□□ -2.07
CHD9-221ENST00000615216 KRTAP23-1A1A580 65 aa2.11□□□□□ -2.07
CHD9-221ENST00000615216 MYO15AQ9UKN7 3530 aa2.1□□□□□ -2.07
CHD9-221ENST00000615216 LOC400499M0QZD8 3231 aa2.1□□□□□ -2.07
CHD9-221ENST00000615216 SPENQ96T58 3664 aaKnown RBP2.09□□□□□ -2.07
CHD9-221ENST00000615216 ZFHX3Q15911 3703 aa2.09□□□□□ -2.07
CHD9-221ENST00000615216 ASPMQ8IZT6 3477 aa2.09□□□□□ -2.08
CHD9-221ENST00000615216 MEGF8Q7Z7M0 2845 aa2.09□□□□□ -2.08
CHD9-221ENST00000615216 ZFHX4Q86UP3 3567 aa2.08□□□□□ -2.08
CHD9-221ENST00000615216 KRTAP10-12P60413 245 aa2.07□□□□□ -2.08
CHD9-221ENST00000615216 FBN3Q75N90 2809 aa2.06□□□□□ -2.08
CHD9-221ENST00000615216 KRTAP17-1Q9BYP8 105 aa2.06□□□□□ -2.08
CHD9-221ENST00000615216 VPS13CQ709C8 3753 aa2.06□□□□□ -2.08
CHD9-221ENST00000615216 TRRAPQ9Y4A5 3859 aa2.05□□□□□ -2.08
CHD9-221ENST00000615216 KRTAP3-2Q9BYR7 98 aa2.05□□□□□ -2.08
CHD9-221ENST00000615216 DMDP11532 3685 aa2.05□□□□□ -2.08
CHD9-221ENST00000615216 KRTAP3-3Q9BYR6 98 aa2.05□□□□□ -2.08
CHD9-221ENST00000615216 COL7A1Q02388 2944 aa2.05□□□□□ -2.08
CHD9-221ENST00000615216 HUWE1Q7Z6Z7 4374 aaKnown RBP2.04□□□□□ -2.08
CHD9-221ENST00000615216 LAMA5O15230 3695 aa2.04□□□□□ -2.08
CHD9-221ENST00000615216 DCHS1Q96JQ0 3298 aa2.04□□□□□ -2.08
CHD9-221ENST00000615216 MT1HL1P0DM35 61 aa2.04□□□□□ -2.08
CHD9-221ENST00000615216 ANK3Q12955 4377 aaKnown RBP2.04□□□□□ -2.08
CHD9-221ENST00000615216 OTOGQ6ZRI0 2925 aa2.03□□□□□ -2.08
CHD9-221ENST00000615216 SRRM2Q9UQ35 2752 aaKnown RBP2.03□□□□□ -2.08
CHD9-221ENST00000615216 CSMD1Q96PZ7 3565 aa2.02□□□□□ -2.09
CHD9-221ENST00000615216 BSNQ9UPA5 3926 aa2.02□□□□□ -2.09
CHD9-221ENST00000615216 FBN1P35555 2871 aaKnown RBP2.02□□□□□ -2.09
CHD9-221ENST00000615216 SMG1Q96Q15 3661 aaKnown RBP2.02□□□□□ -2.09
CHD9-221ENST00000615216 CMYA5Q8N3K9 4069 aa2.01□□□□□ -2.09
CHD9-221ENST00000615216 DNAH3Q8TD57 4116 aa2□□□□□ -2.09
CHD9-221ENST00000615216 KRTAP10-4P60372 401 aaPredicted RBP2□□□□□ -2.09
CHD9-221ENST00000615216 RELNP78509 3460 aa2□□□□□ -2.09
CHD9-221ENST00000615216 DNAH7Q8WXX0 4024 aa1.99□□□□□ -2.09
CHD9-221ENST00000615216 KRTAP12-3P60328 96 aa1.99□□□□□ -2.09
CHD9-221ENST00000615216 DNAH1Q9P2D7 4330 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms