RNA–Protein interactions for RNA: ENST00000614640.4

MSRB3-212, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MSRB3, Length 4,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-212ENST00000614640 Q1T7F1 81 aa5.38□□□□□ -1.55
MSRB3-212ENST00000614640 NOTCH2NLQ7Z3S9 236 aa5.38□□□□□ -1.55
MSRB3-212ENST00000614640 FAM229AH3BQW9 127 aa5.38□□□□□ -1.55
MSRB3-212ENST00000614640 PRO0628Q9UI54 55 aa5.38□□□□□ -1.55
MSRB3-212ENST00000614640 PKD1P98161 4303 aa5.38□□□□□ -1.55
MSRB3-212ENST00000614640 HYDINQ4G0P3 5121 aa5.38□□□□□ -1.55
MSRB3-212ENST00000614640 A0A1B0GVX0 72 aa5.38□□□□□ -1.55
MSRB3-212ENST00000614640 IGHV6-1A0A0B4J1U7 121 aa5.37□□□□□ -1.55
MSRB3-212ENST00000614640 PLA2G1BP04054 148 aaKnown RBP5.37□□□□□ -1.55
MSRB3-212ENST00000614640 PKHD1P08F94 4074 aa5.36□□□□□ -1.55
MSRB3-212ENST00000614640 SMR3BP02814 79 aaPredicted RBP5.36□□□□□ -1.55
MSRB3-212ENST00000614640 SPINK6Q6UWN8 80 aa5.36□□□□□ -1.55
MSRB3-212ENST00000614640 LRP1BQ9NZR2 4599 aa5.35□□□□□ -1.55
MSRB3-212ENST00000614640 FAT2Q9NYQ8 4349 aa5.35□□□□□ -1.55
MSRB3-212ENST00000614640 TP53AIP1Q9HCN2 124 aa5.35□□□□□ -1.55
MSRB3-212ENST00000614640 BRK1Q8WUW1 75 aa5.34□□□□□ -1.56
MSRB3-212ENST00000614640 IGLV7-46A0A075B6I9 117 aa5.33□□□□□ -1.56
MSRB3-212ENST00000614640 CD164Q04900 197 aa5.33□□□□□ -1.56
MSRB3-212ENST00000614640 MRPL34Q9BQ48 92 aaKnown RBP5.33□□□□□ -1.56
MSRB3-212ENST00000614640 TYMSOSQ8TAI1 123 aa5.33□□□□□ -1.56
MSRB3-212ENST00000614640 LIMD2Q9BT23 127 aa5.33□□□□□ -1.56
MSRB3-212ENST00000614640 A0A1B0GVY2 172 aa5.32□□□□□ -1.56
MSRB3-212ENST00000614640 PCOTHQ58A44 107 aa5.32□□□□□ -1.56
MSRB3-212ENST00000614640 PSPHP1O15172 72 aa5.31□□□□□ -1.56
MSRB3-212ENST00000614640 NDUFS5O43920 106 aa5.31□□□□□ -1.56
MSRB3-212ENST00000614640 KRTAP13-3Q3SY46 172 aa5.29□□□□□ -1.56
MSRB3-212ENST00000614640 Q8N9P0 234 aaPredicted RBP5.29□□□□□ -1.56
MSRB3-212ENST00000614640 VPS13BQ7Z7G8 4022 aa5.28□□□□□ -1.56
MSRB3-212ENST00000614640 Q5W150 140 aa5.28□□□□□ -1.56
MSRB3-212ENST00000614640 A8MUN3 132 aa5.28□□□□□ -1.56
MSRB3-212ENST00000614640 COA5Q86WW8 74 aa5.28□□□□□ -1.56
MSRB3-212ENST00000614640 SPAG11AQ6PDA7 123 aa5.28□□□□□ -1.56
MSRB3-212ENST00000614640 KRTAP13-2Q52LG2 175 aa5.27□□□□□ -1.57
MSRB3-212ENST00000614640 Q5VV11 94 aa5.26□□□□□ -1.57
MSRB3-212ENST00000614640 V9GYY9 64 aa5.25□□□□□ -1.57
MSRB3-212ENST00000614640 SPINK1P00995 79 aa5.25□□□□□ -1.57
MSRB3-212ENST00000614640 LINC00304Q8N9R0 145 aa5.25□□□□□ -1.57
MSRB3-212ENST00000614640 C1orf195Q5TG92 126 aa5.23□□□□□ -1.57
MSRB3-212ENST00000614640 KRTAP1-4P0C5Y4 121 aa5.23□□□□□ -1.57
MSRB3-212ENST00000614640 A8MU10 97 aa5.22□□□□□ -1.57
MSRB3-212ENST00000614640 HRES1P13985 223 aa5.22□□□□□ -1.57
MSRB3-212ENST00000614640 PRR26Q8N8Z3 221 aa5.22□□□□□ -1.57
MSRB3-212ENST00000614640 LOC101927531A0A1B0GV80 90 aa5.21□□□□□ -1.57
MSRB3-212ENST00000614640 C8orf87E5RJ46 101 aa5.21□□□□□ -1.58
MSRB3-212ENST00000614640 Q5VSD8 79 aa5.21□□□□□ -1.58
MSRB3-212ENST00000614640 PRR15LQ9BU68 103 aa5.2□□□□□ -1.58
MSRB3-212ENST00000614640 LINC00313P59037 77 aa5.19□□□□□ -1.58
MSRB3-212ENST00000614640 KRTAP16-1A8MUX0 517 aa5.19□□□□□ -1.58
MSRB3-212ENST00000614640 PKHD1L1Q86WI1 4243 aa5.18□□□□□ -1.58
MSRB3-212ENST00000614640 SACSQ9NZJ4 4579 aa5.17□□□□□ -1.58
MSRB3-212ENST00000614640 Q75L30 129 aa5.17□□□□□ -1.58
MSRB3-212ENST00000614640 CHKB-CPT1BH3BT56 60 aa5.17□□□□□ -1.58
MSRB3-212ENST00000614640 LINC01558Q9Y6Z2 57 aa5.16□□□□□ -1.58
MSRB3-212ENST00000614640 FAT3Q8TDW7 4589 aa5.16□□□□□ -1.58
MSRB3-212ENST00000614640 RPS29P62273 56 aaKnown RBP5.15□□□□□ -1.58
MSRB3-212ENST00000614640 RETNLBQ9BQ08 111 aa5.15□□□□□ -1.59
MSRB3-212ENST00000614640 LCA10Q71F78 164 aa5.13□□□□□ -1.59
MSRB3-212ENST00000614640 IGKV2-30P06310 120 aa5.13□□□□□ -1.59
MSRB3-212ENST00000614640 DMAC1Q96GE9 116 aa5.12□□□□□ -1.59
MSRB3-212ENST00000614640 Q8N1X5 172 aa5.11□□□□□ -1.59
MSRB3-212ENST00000614640 DYNC1H1Q14204 4646 aaKnown RBP5.11□□□□□ -1.59
MSRB3-212ENST00000614640 ACYP2P14621 99 aa5.09□□□□□ -1.59
MSRB3-212ENST00000614640 A6NED7 52 aa5.09□□□□□ -1.59
MSRB3-212ENST00000614640 SPINK7P58062 85 aa5.08□□□□□ -1.6
MSRB3-212ENST00000614640 FAT1Q14517 4588 aa5.07□□□□□ -1.6
MSRB3-212ENST00000614640 LCE2DQ5TA82 110 aaPredicted RBP5.07□□□□□ -1.6
MSRB3-212ENST00000614640 APOBP04114 4563 aaKnown RBP5.07□□□□□ -1.6
MSRB3-212ENST00000614640 CDC42SE1Q9NRR8 79 aa5.06□□□□□ -1.6
MSRB3-212ENST00000614640 J3QL48 77 aa5.05□□□□□ -1.6
MSRB3-212ENST00000614640 KRTAP10-4P60372 401 aaPredicted RBP5.05□□□□□ -1.6
MSRB3-212ENST00000614640 KRTAP3-3Q9BYR6 98 aa5.04□□□□□ -1.6
MSRB3-212ENST00000614640 KRTAP3-2Q9BYR7 98 aa5.04□□□□□ -1.6
MSRB3-212ENST00000614640 RYR2Q92736 4967 aa5.04□□□□□ -1.6
MSRB3-212ENST00000614640 IGKV2D-30A0A075B6S6 120 aa5.04□□□□□ -1.6
MSRB3-212ENST00000614640 PMAIP1Q13794 54 aa5.03□□□□□ -1.6
MSRB3-212ENST00000614640 ATP11AUNQ6ZP68 121 aa5.03□□□□□ -1.6
MSRB3-212ENST00000614640 SPTSSBQ8NFR3 76 aa5.02□□□□□ -1.61
MSRB3-212ENST00000614640 C9orf92A6NGG3 77 aa5□□□□□ -1.61
MSRB3-212ENST00000614640 A6NN06 94 aa4.99□□□□□ -1.61
MSRB3-212ENST00000614640 KRTAP10-8P60410 259 aa4.99□□□□□ -1.61
MSRB3-212ENST00000614640 C7orf65Q6ZTY9 151 aa4.97□□□□□ -1.61
MSRB3-212ENST00000614640 KMT2CQ8NEZ4 4911 aaKnown RBP4.97□□□□□ -1.61
MSRB3-212ENST00000614640 A0A1B0GU69 56 aa4.95□□□□□ -1.62
MSRB3-212ENST00000614640 FLG2Q5D862 2391 aaPredicted RBP4.94□□□□□ -1.62
MSRB3-212ENST00000614640 DMBT1Q9UGM3 2413 aaPredicted RBP4.93□□□□□ -1.62
MSRB3-212ENST00000614640 C20orf166-AS1Q96NR2 134 aa4.93□□□□□ -1.62
MSRB3-212ENST00000614640 A8MUU9 505 aa4.93□□□□□ -1.62
MSRB3-212ENST00000614640 KTN1-AS1Q86SY8 53 aa4.93□□□□□ -1.62
MSRB3-212ENST00000614640 SPATA8Q6RVD6 105 aa4.9□□□□□ -1.63
MSRB3-212ENST00000614640 TNXBP22105 4242 aa4.9□□□□□ -1.63
MSRB3-212ENST00000614640 LRP1Q07954 4544 aaKnown RBP4.9□□□□□ -1.63
MSRB3-212ENST00000614640 KRTAP3-1Q9BYR8 98 aa4.89□□□□□ -1.63
MSRB3-212ENST00000614640 SEC61GP60059 68 aa4.86□□□□□ -1.63
MSRB3-212ENST00000614640 UQCR11O14957 56 aa4.86□□□□□ -1.63
MSRB3-212ENST00000614640 HSPG2P98160 4391 aa4.85□□□□□ -1.63
MSRB3-212ENST00000614640 MIR22HGQ0VDD5 57 aa4.85□□□□□ -1.63
MSRB3-212ENST00000614640 MT1HL1P0DM35 61 aa4.84□□□□□ -1.63
MSRB3-212ENST00000614640 RYR3Q15413 4870 aa4.82□□□□□ -1.64
MSRB3-212ENST00000614640 RYR1P21817 5038 aa4.82□□□□□ -1.64
MSRB3-212ENST00000614640 RPL37P61927 97 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms