RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 IGSF10Q6WRI0 2623 aa3.32□□□□□ -1.88
CLCN3-211ENST00000613795 MGAQ8IWI9 3026 aa3.31□□□□□ -1.88
CLCN3-211ENST00000613795 UBR5O95071 2799 aaPredicted RBP3.31□□□□□ -1.88
CLCN3-211ENST00000613795 KALRNO60229 2985 aa3.29□□□□□ -1.88
CLCN3-211ENST00000613795 ITPR2Q14571 2701 aa3.29□□□□□ -1.88
CLCN3-211ENST00000613795 DNAH14Q0VDD8 3507 aa3.26□□□□□ -1.89
CLCN3-211ENST00000613795 TRIOO75962 3097 aa3.25□□□□□ -1.89
CLCN3-211ENST00000613795 NBEAQ8NFP9 2946 aa3.24□□□□□ -1.89
CLCN3-211ENST00000613795 DSPP15924 2871 aaKnown RBP3.23□□□□□ -1.89
CLCN3-211ENST00000613795 UTP20O75691 2785 aaKnown RBP3.23□□□□□ -1.89
CLCN3-211ENST00000613795 LAMA2P24043 3122 aaKnown RBP3.23□□□□□ -1.89
CLCN3-211ENST00000613795 TGP01266 2768 aa3.23□□□□□ -1.89
CLCN3-211ENST00000613795 RANBP2P49792 3224 aaKnown RBP3.23□□□□□ -1.89
CLCN3-211ENST00000613795 LRBAP50851 2863 aa3.23□□□□□ -1.89
CLCN3-211ENST00000613795 CDH23Q9H251 3354 aa3.22□□□□□ -1.89
CLCN3-211ENST00000613795 LAMA3Q16787 3333 aa3.22□□□□□ -1.89
CLCN3-211ENST00000613795 ZZEF1O43149 2961 aa3.22□□□□□ -1.89
CLCN3-211ENST00000613795 UNC80Q8N2C7 3258 aa3.21□□□□□ -1.9
CLCN3-211ENST00000613795 FREM2Q5SZK8 3169 aa3.18□□□□□ -1.9
CLCN3-211ENST00000613795 NIPBLQ6KC79 2804 aaeCLIP3.17□□□□□ -1.9
CLCN3-211ENST00000613795 ASH1LQ9NR48 2969 aaKnown RBP3.16□□□□□ -1.9
CLCN3-211ENST00000613795 LAMA1P25391 3075 aa3.16□□□□□ -1.9
CLCN3-211ENST00000613795 SPTBN5Q9NRC6 3674 aaKnown RBP3.15□□□□□ -1.91
CLCN3-211ENST00000613795 HIVEP1P15822 2718 aa3.14□□□□□ -1.91
CLCN3-211ENST00000613795 VPS13AQ96RL7 3174 aa3.14□□□□□ -1.91
CLCN3-211ENST00000613795 TNRC18O15417 2968 aaPredicted RBP3.14□□□□□ -1.91
CLCN3-211ENST00000613795 VCANP13611 3396 aa3.14□□□□□ -1.91
CLCN3-211ENST00000613795 WDFY4Q6ZS81 3184 aa3.13□□□□□ -1.91
CLCN3-211ENST00000613795 SZT2Q5T011 3432 aa3.13□□□□□ -1.91
CLCN3-211ENST00000613795 XIRP2A4UGR9 3374 aa3.13□□□□□ -1.91
CLCN3-211ENST00000613795 FLNCQ14315 2725 aa3.13□□□□□ -1.91
CLCN3-211ENST00000613795 PRUNE2Q8WUY3 3088 aa3.12□□□□□ -1.91
CLCN3-211ENST00000613795 CELSR3Q9NYQ7 3312 aa3.12□□□□□ -1.91
CLCN3-211ENST00000613795 LCE2CQ5TA81 110 aa3.1□□□□□ -1.91
CLCN3-211ENST00000613795 ADGRG4Q8IZF6 3080 aa3.09□□□□□ -1.91
CLCN3-211ENST00000613795 LCE2DQ5TA82 110 aaPredicted RBP3.09□□□□□ -1.92
CLCN3-211ENST00000613795 COL6A3P12111 3177 aa3.08□□□□□ -1.92
CLCN3-211ENST00000613795 USP34Q70CQ2 3546 aa3.07□□□□□ -1.92
CLCN3-211ENST00000613795 MT1HL1P0DM35 61 aa3.07□□□□□ -1.92
CLCN3-211ENST00000613795 TACC2O95359 2948 aa3.07□□□□□ -1.92
CLCN3-211ENST00000613795 HRNRQ86YZ3 2850 aaPredicted RBP3.06□□□□□ -1.92
CLCN3-211ENST00000613795 FRYLO94915 3013 aa3.06□□□□□ -1.92
CLCN3-211ENST00000613795 REV3LO60673 3130 aa3.05□□□□□ -1.92
CLCN3-211ENST00000613795 TENM2Q9NT68 2774 aa3.05□□□□□ -1.92
CLCN3-211ENST00000613795 ALMS1Q8TCU4 4167 aa3.04□□□□□ -1.92
CLCN3-211ENST00000613795 ATMQ13315 3056 aa3.03□□□□□ -1.92
CLCN3-211ENST00000613795 DMXL2Q8TDJ6 3036 aa3.03□□□□□ -1.92
CLCN3-211ENST00000613795 CELSR2Q9HCU4 2923 aa3.03□□□□□ -1.92
CLCN3-211ENST00000613795 COL12A1Q99715 3063 aa3.03□□□□□ -1.92
CLCN3-211ENST00000613795 HUWE1Q7Z6Z7 4374 aaKnown RBP3.02□□□□□ -1.93
CLCN3-211ENST00000613795 TENM4Q6N022 2769 aa3.02□□□□□ -1.93
CLCN3-211ENST00000613795 KRTAP10-4P60372 401 aaPredicted RBP3.01□□□□□ -1.93
CLCN3-211ENST00000613795 KRTAP10-12P60413 245 aa3□□□□□ -1.93
CLCN3-211ENST00000613795 DCHS2Q6V1P9 2916 aa2.99□□□□□ -1.93
CLCN3-211ENST00000613795 BOD1L1Q8NFC6 3051 aa2.99□□□□□ -1.93
CLCN3-211ENST00000613795 SPEGQ15772 3267 aa2.98□□□□□ -1.93
CLCN3-211ENST00000613795 NF1P21359 2839 aa2.97□□□□□ -1.93
CLCN3-211ENST00000613795 EYSQ5T1H1 3165 aa2.97□□□□□ -1.93
CLCN3-211ENST00000613795 LCE2BO14633 110 aa2.96□□□□□ -1.93
CLCN3-211ENST00000613795 ZANQ9Y493 2812 aa2.96□□□□□ -1.94
CLCN3-211ENST00000613795 KRTAP12-3P60328 96 aa2.96□□□□□ -1.94
CLCN3-211ENST00000613795 TENM3Q9P273 2699 aa2.95□□□□□ -1.94
CLCN3-211ENST00000613795 ANK3Q12955 4377 aaKnown RBP2.95□□□□□ -1.94
CLCN3-211ENST00000613795 ZFHX3Q15911 3703 aa2.94□□□□□ -1.94
CLCN3-211ENST00000613795 MYO15AQ9UKN7 3530 aa2.94□□□□□ -1.94
CLCN3-211ENST00000613795 FBN2P35556 2912 aa2.93□□□□□ -1.94
CLCN3-211ENST00000613795 TENM1Q9UKZ4 2725 aa2.92□□□□□ -1.94
CLCN3-211ENST00000613795 LCE3AQ5TA76 89 aa2.92□□□□□ -1.94
CLCN3-211ENST00000613795 WDFY3Q8IZQ1 3526 aa2.91□□□□□ -1.94
CLCN3-211ENST00000613795 DMXL1Q9Y485 3027 aa2.91□□□□□ -1.94
CLCN3-211ENST00000613795 LOC400499M0QZD8 3231 aa2.9□□□□□ -1.95
CLCN3-211ENST00000613795 CELSR1Q9NYQ6 3014 aa2.89□□□□□ -1.95
CLCN3-211ENST00000613795 PDZD2O15018 2839 aa2.88□□□□□ -1.95
CLCN3-211ENST00000613795 KRTAP19-4Q3LI73 84 aa2.88□□□□□ -1.95
CLCN3-211ENST00000613795 MXRA5Q9NR99 2828 aa2.88□□□□□ -1.95
CLCN3-211ENST00000613795 CFAP47Q6ZTR5 3102 aa2.87□□□□□ -1.95
CLCN3-211ENST00000613795 LCE2AQ5TA79 106 aaPredicted RBP2.87□□□□□ -1.95
CLCN3-211ENST00000613795 DCHS1Q96JQ0 3298 aa2.86□□□□□ -1.95
CLCN3-211ENST00000613795 DNAH2Q9P225 4427 aa2.85□□□□□ -1.95
CLCN3-211ENST00000613795 ZFHX4Q86UP3 3567 aa2.85□□□□□ -1.95
CLCN3-211ENST00000613795 CSMD1Q96PZ7 3565 aa2.84□□□□□ -1.96
CLCN3-211ENST00000613795 CRYBG3Q68DQ2 2970 aa2.84□□□□□ -1.96
CLCN3-211ENST00000613795 SMG1Q96Q15 3661 aaKnown RBP2.83□□□□□ -1.96
CLCN3-211ENST00000613795 ASPMQ8IZT6 3477 aa2.82□□□□□ -1.96
CLCN3-211ENST00000613795 SRRM2Q9UQ35 2752 aaKnown RBP2.82□□□□□ -1.96
CLCN3-211ENST00000613795 LORP23490 312 aaPredicted RBP2.82□□□□□ -1.96
CLCN3-211ENST00000613795 KRTAP4-5Q9BYR2 181 aa2.81□□□□□ -1.96
CLCN3-211ENST00000613795 KRTAP17-1Q9BYP8 105 aa2.8□□□□□ -1.96
CLCN3-211ENST00000613795 PKD1L1Q8TDX9 2849 aa2.8□□□□□ -1.96
CLCN3-211ENST00000613795 MEGF8Q7Z7M0 2845 aa2.77□□□□□ -1.97
CLCN3-211ENST00000613795 DMDP11532 3685 aa2.77□□□□□ -1.97
CLCN3-211ENST00000613795 RELNP78509 3460 aa2.76□□□□□ -1.97
CLCN3-211ENST00000613795 KRTAP8-1Q8IUC2 63 aa2.76□□□□□ -1.97
CLCN3-211ENST00000613795 BSNQ9UPA5 3926 aa2.76□□□□□ -1.97
CLCN3-211ENST00000613795 DNAH1Q9P2D7 4330 aa2.75□□□□□ -1.97
CLCN3-211ENST00000613795 FBN3Q75N90 2809 aa2.74□□□□□ -1.97
CLCN3-211ENST00000613795 KRTAP10-5P60370 271 aa2.73□□□□□ -1.97
CLCN3-211ENST00000613795 DNAH10Q8IVF4 4471 aa2.73□□□□□ -1.97
CLCN3-211ENST00000613795 SPRR2GQ9BYE4 73 aa2.73□□□□□ -1.97
CLCN3-211ENST00000613795 CRCT1Q9UGL9 99 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms