RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 TMEM238LA0A1B0GVL6 79 aa11.09□□□□□ -0.63
MMP28-203ENST00000612672 A6NJY4 79 aa11.09□□□□□ -0.63
MMP28-203ENST00000612672 HSD52Q0P140 79 aa11.09□□□□□ -0.63
MMP28-203ENST00000612672 SNCGO76070 127 aa11.08□□□□□ -0.64
MMP28-203ENST00000612672 K7ERJ3 54 aa11.07□□□□□ -0.64
MMP28-203ENST00000612672 ANKRD29Q8N6D5 301 aa11.07□□□□□ -0.64
MMP28-203ENST00000612672 UQCR10Q9UDW1 63 aa11.06□□□□□ -0.64
MMP28-203ENST00000612672 TRIAP1O43715 76 aa11.05□□□□□ -0.64
MMP28-203ENST00000612672 A0A1B0GX51 115 aa11.04□□□□□ -0.64
MMP28-203ENST00000612672 A0A1B0GVX0 72 aa11.03□□□□□ -0.64
MMP28-203ENST00000612672 WFDC13Q8IUB5 93 aa11.02□□□□□ -0.65
MMP28-203ENST00000612672 C8orf87E5RJ46 101 aa11□□□□□ -0.65
MMP28-203ENST00000612672 CCKP06307 115 aa10.99□□□□□ -0.65
MMP28-203ENST00000612672 GHRHP01286 108 aa10.96□□□□□ -0.65
MMP28-203ENST00000612672 TRACP01848 142 aa10.96□□□□□ -0.65
MMP28-203ENST00000612672 PSMB2P49721 201 aa10.94□□□□□ -0.66
MMP28-203ENST00000612672 ORMDL1Q9P0S3 153 aa10.91□□□□□ -0.66
MMP28-203ENST00000612672 SMIM6P0DI80 62 aa10.86□□□□□ -0.67
MMP28-203ENST00000612672 KRTAP20-1Q3LI63 56 aa10.85□□□□□ -0.67
MMP28-203ENST00000612672 VPS25Q9BRG1 176 aa10.85□□□□□ -0.67
MMP28-203ENST00000612672 DNAL4O96015 105 aa10.84□□□□□ -0.67
MMP28-203ENST00000612672 COX6CP09669 75 aa10.84□□□□□ -0.67
MMP28-203ENST00000612672 TMEM256-PLSCR3K7ERE1 68 aa10.81□□□□□ -0.68
MMP28-203ENST00000612672 LOC105371267A0A1B0GV96 52 aa10.79□□□□□ -0.68
MMP28-203ENST00000612672 SCGB1C2P0DMR2 95 aa10.78□□□□□ -0.68
MMP28-203ENST00000612672 MDN1Q9NU22 5596 aa10.77□□□□□ -0.68
MMP28-203ENST00000612672 H3BQ85 93 aa10.77□□□□□ -0.69
MMP28-203ENST00000612672 H1FX-AS1Q4G0G2 97 aa10.77□□□□□ -0.69
MMP28-203ENST00000612672 NAA38Q9BRA0 125 aaKnown RBP10.77□□□□□ -0.69
MMP28-203ENST00000612672 UBE2V1Q13404 147 aa10.76□□□□□ -0.69
MMP28-203ENST00000612672 C8orf17Q9NRJ1 99 aa10.76□□□□□ -0.69
MMP28-203ENST00000612672 M0R143 59 aa10.75□□□□□ -0.69
MMP28-203ENST00000612672 J3KT08 172 aa10.74□□□□□ -0.69
MMP28-203ENST00000612672 MT1BP07438 61 aa10.74□□□□□ -0.69
MMP28-203ENST00000612672 A6NN06 94 aa10.73□□□□□ -0.69
MMP28-203ENST00000612672 KMT2DO14686 5537 aa10.73□□□□□ -0.69
MMP28-203ENST00000612672 LYRM7Q5U5X0 104 aa10.72□□□□□ -0.69
MMP28-203ENST00000612672 Q6ZQT0 140 aa10.69□□□□□ -0.7
MMP28-203ENST00000612672 IGKV3D-7A0A0C4DH55 119 aa10.68□□□□□ -0.7
MMP28-203ENST00000612672 RBM3P98179 157 aaKnown RBP10.68□□□□□ -0.7
MMP28-203ENST00000612672 TSTD3H0UI37 97 aa10.67□□□□□ -0.7
MMP28-203ENST00000612672 NDUFB1O75438 58 aa10.65□□□□□ -0.7
MMP28-203ENST00000612672 BAALC-AS2P0C853 105 aa10.65□□□□□ -0.7
MMP28-203ENST00000612672 DSCR8Q96T75 97 aa10.65□□□□□ -0.7
MMP28-203ENST00000612672 BATFQ16520 125 aa10.64□□□□□ -0.71
MMP28-203ENST00000612672 Q6ZVQ6 151 aa10.64□□□□□ -0.71
MMP28-203ENST00000612672 KRTAP5-9P26371 169 aa10.63□□□□□ -0.71
MMP28-203ENST00000612672 SMCPP49901 116 aaPredicted RBP10.6□□□□□ -0.71
MMP28-203ENST00000612672 ATXN8Q156A1 80 aa10.6□□□□□ -0.71
MMP28-203ENST00000612672 C9JAW5 83 aa10.57□□□□□ -0.72
MMP28-203ENST00000612672 KRTAP10-5P60370 271 aa10.56□□□□□ -0.72
MMP28-203ENST00000612672 KRTAP19-8Q3LI54 63 aa10.55□□□□□ -0.72
MMP28-203ENST00000612672 MMP24-AS1A0A0U1RRL7 71 aa10.54□□□□□ -0.72
MMP28-203ENST00000612672 C21orf62-AS1Q17RA5 79 aa10.53□□□□□ -0.72
MMP28-203ENST00000612672 Q5VV11 94 aa10.53□□□□□ -0.72
MMP28-203ENST00000612672 TAX1BP3O14907 124 aa10.51□□□□□ -0.73
MMP28-203ENST00000612672 PRR15Q8IV56 129 aa10.51□□□□□ -0.73
MMP28-203ENST00000612672 MRPL34Q9BQ48 92 aaKnown RBP10.51□□□□□ -0.73
MMP28-203ENST00000612672 TMEM254Q8TBM7 123 aa10.5□□□□□ -0.73
MMP28-203ENST00000612672 IGKV2D-30A0A075B6S6 120 aa10.49□□□□□ -0.73
MMP28-203ENST00000612672 IGKV2-30P06310 120 aa10.49□□□□□ -0.73
MMP28-203ENST00000612672 C9orf118A6NHY6 69 aa10.48□□□□□ -0.73
MMP28-203ENST00000612672 SPRR2GQ9BYE4 73 aa10.48□□□□□ -0.73
MMP28-203ENST00000612672 Q5W150 140 aa10.46□□□□□ -0.73
MMP28-203ENST00000612672 FAM236AA0A1B0GUQ0 79 aa10.45□□□□□ -0.74
MMP28-203ENST00000612672 FAM236BA0A1B0GV22 79 aa10.45□□□□□ -0.74
MMP28-203ENST00000612672 JMJD7-PLA2G4BH0Y9G9 81 aa10.45□□□□□ -0.74
MMP28-203ENST00000612672 C5orf47Q569G3 176 aa10.45□□□□□ -0.74
MMP28-203ENST00000612672 LOC110117498A0A087WWA1 95 aa10.44□□□□□ -0.74
MMP28-203ENST00000612672 C14orf132Q9NPU4 83 aa10.44□□□□□ -0.74
MMP28-203ENST00000612672 A0A1W2PPM0 123 aa10.43□□□□□ -0.74
MMP28-203ENST00000612672 NDUFS5O43920 106 aa10.4□□□□□ -0.74
MMP28-203ENST00000612672 C4orf26Q17RF5 130 aa10.4□□□□□ -0.74
MMP28-203ENST00000612672 C7orf65Q6ZTY9 151 aa10.4□□□□□ -0.74
MMP28-203ENST00000612672 hDV103S1A0JD37 113 aa10.38□□□□□ -0.75
MMP28-203ENST00000612672 K7EQZ3 153 aa10.36□□□□□ -0.75
MMP28-203ENST00000612672 KRTAP2-3P0C7H8 128 aa10.36□□□□□ -0.75
MMP28-203ENST00000612672 KRTAP2-4Q9BYR9 128 aa10.36□□□□□ -0.75
MMP28-203ENST00000612672 A0A1B0GW54 56 aa10.35□□□□□ -0.75
MMP28-203ENST00000612672 H3BT86 120 aa10.34□□□□□ -0.75
MMP28-203ENST00000612672 PDE6GP18545 87 aa10.34□□□□□ -0.75
MMP28-203ENST00000612672 KRTAP3-1Q9BYR8 98 aa10.32□□□□□ -0.76
MMP28-203ENST00000612672 NREPQ16612 68 aa10.29□□□□□ -0.76
MMP28-203ENST00000612672 SPCS1Q9Y6A9 102 aa10.29□□□□□ -0.76
MMP28-203ENST00000612672 COL5A1-AS1Q5SY13 56 aa10.25□□□□□ -0.77
MMP28-203ENST00000612672 S4R3F8 94 aa10.23□□□□□ -0.77
MMP28-203ENST00000612672 LCA10Q71F78 164 aa10.22□□□□□ -0.77
MMP28-203ENST00000612672 KLKP1Q107X0 134 aa10.19□□□□□ -0.78
MMP28-203ENST00000612672 PRO0461Q9UI25 63 aa10.19□□□□□ -0.78
MMP28-203ENST00000612672 CSAG1Q6PB30 78 aa10.18□□□□□ -0.78
MMP28-203ENST00000612672 PCP4L1A6NKN8 68 aa10.16□□□□□ -0.78
MMP28-203ENST00000612672 K7EP34 96 aa10.16□□□□□ -0.78
MMP28-203ENST00000612672 HCG22E2RYF7 251 aa10.15□□□□□ -0.78
MMP28-203ENST00000612672 SPRR2EP22531 72 aa10.15□□□□□ -0.78
MMP28-203ENST00000612672 SPRR2BP35325 72 aa10.15□□□□□ -0.78
MMP28-203ENST00000612672 SPRR2AP35326 72 aa10.15□□□□□ -0.78
MMP28-203ENST00000612672 SPRR2FQ96RM1 72 aa10.15□□□□□ -0.78
MMP28-203ENST00000612672 Q8N9L7 120 aa10.13□□□□□ -0.79
MMP28-203ENST00000612672 IMUPQ9GZP8 106 aa10.11□□□□□ -0.79
MMP28-203ENST00000612672 CASC2Q6XLA1 102 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms