RNA–Protein interactions for RNA: ENST00000612349.1

SMAD6-205, Transcript of SMAD family member 6, humanhuman

Gene SMAD6, Length 5,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-205ENST00000612349 ASH1LQ9NR48 2969 aaKnown RBP12.03□□□□□ -0.48
SMAD6-205ENST00000612349 SPTBN5Q9NRC6 3674 aaKnown RBP12.01□□□□□ -0.49
SMAD6-205ENST00000612349 CELSR2Q9HCU4 2923 aa11.99□□□□□ -0.49
SMAD6-205ENST00000612349 KRTAP11-1Q8IUC1 163 aa11.96□□□□□ -0.49
SMAD6-205ENST00000612349 EYSQ5T1H1 3165 aa11.96□□□□□ -0.5
SMAD6-205ENST00000612349 ROMO1P60602 79 aa11.95□□□□□ -0.5
SMAD6-205ENST00000612349 ZANQ9Y493 2812 aa11.92□□□□□ -0.5
SMAD6-205ENST00000612349 ADM2Q7Z4H4 148 aa11.92□□□□□ -0.5
SMAD6-205ENST00000612349 PLAC4Q8WY50 150 aa11.91□□□□□ -0.5
SMAD6-205ENST00000612349 SPEGQ15772 3267 aa11.91□□□□□ -0.5
SMAD6-205ENST00000612349 CRYBG3Q68DQ2 2970 aa11.89□□□□□ -0.51
SMAD6-205ENST00000612349 KRTAP7-1Q8IUC3 87 aa11.89□□□□□ -0.51
SMAD6-205ENST00000612349 NOTCH2NLQ7Z3S9 236 aa11.89□□□□□ -0.51
SMAD6-205ENST00000612349 TNRC18O15417 2968 aaPredicted RBP11.88□□□□□ -0.51
SMAD6-205ENST00000612349 DCHS2Q6V1P9 2916 aa11.84□□□□□ -0.51
SMAD6-205ENST00000612349 KRTAP13-1Q8IUC0 172 aa11.83□□□□□ -0.52
SMAD6-205ENST00000612349 KRTAP13-2Q52LG2 175 aa11.8□□□□□ -0.52
SMAD6-205ENST00000612349 A6NN06 94 aa11.78□□□□□ -0.52
SMAD6-205ENST00000612349 CFAP47Q6ZTR5 3102 aa11.77□□□□□ -0.53
SMAD6-205ENST00000612349 SPATA8Q6RVD6 105 aa11.77□□□□□ -0.53
SMAD6-205ENST00000612349 DMXL1Q9Y485 3027 aa11.75□□□□□ -0.53
SMAD6-205ENST00000612349 A0A0A0MQY5 61 aa11.75□□□□□ -0.53
SMAD6-205ENST00000612349 A8MUU9 505 aa11.62□□□□□ -0.55
SMAD6-205ENST00000612349 USP34Q70CQ2 3546 aa11.62□□□□□ -0.55
SMAD6-205ENST00000612349 NF1P21359 2839 aa11.59□□□□□ -0.55
SMAD6-205ENST00000612349 HRNRQ86YZ3 2850 aaPredicted RBP11.58□□□□□ -0.56
SMAD6-205ENST00000612349 A8MU10 97 aa11.56□□□□□ -0.56
SMAD6-205ENST00000612349 MYO15AQ9UKN7 3530 aa11.55□□□□□ -0.56
SMAD6-205ENST00000612349 LOC400499M0QZD8 3231 aa11.55□□□□□ -0.56
SMAD6-205ENST00000612349 C20orf166-AS1Q96NR2 134 aa11.55□□□□□ -0.56
SMAD6-205ENST00000612349 FBN2P35556 2912 aa11.53□□□□□ -0.56
SMAD6-205ENST00000612349 TENM3Q9P273 2699 aa11.51□□□□□ -0.57
SMAD6-205ENST00000612349 KRTAP25-1Q3LHN0 102 aa11.49□□□□□ -0.57
SMAD6-205ENST00000612349 TENM1Q9UKZ4 2725 aa11.39□□□□□ -0.59
SMAD6-205ENST00000612349 KRTAP16-1A8MUX0 517 aa11.3□□□□□ -0.6
SMAD6-205ENST00000612349 MXRA5Q9NR99 2828 aa11.3□□□□□ -0.6
SMAD6-205ENST00000612349 KRTAP1-4P0C5Y4 121 aa11.27□□□□□ -0.61
SMAD6-205ENST00000612349 TNP1P09430 55 aa11.24□□□□□ -0.61
SMAD6-205ENST00000612349 TENM2Q9NT68 2774 aa11.22□□□□□ -0.61
SMAD6-205ENST00000612349 XP32Q5T750 250 aa11.19□□□□□ -0.62
SMAD6-205ENST00000612349 CELSR1Q9NYQ6 3014 aa11.14□□□□□ -0.63
SMAD6-205ENST00000612349 PKD1L1Q8TDX9 2849 aa11.12□□□□□ -0.63
SMAD6-205ENST00000612349 NDUFAF8A1L188 74 aa11.12□□□□□ -0.63
SMAD6-205ENST00000612349 TPRXLQ17RH7 258 aa11.1□□□□□ -0.63
SMAD6-205ENST00000612349 DCHS1Q96JQ0 3298 aa11.08□□□□□ -0.64
SMAD6-205ENST00000612349 WDFY3Q8IZQ1 3526 aa11.05□□□□□ -0.64
SMAD6-205ENST00000612349 RELNP78509 3460 aa11.03□□□□□ -0.64
SMAD6-205ENST00000612349 PP632Q6XCG6 107 aa10.95□□□□□ -0.66
SMAD6-205ENST00000612349 LAMA5O15230 3695 aa10.91□□□□□ -0.66
SMAD6-205ENST00000612349 KRTAP10-8P60410 259 aa10.9□□□□□ -0.66
SMAD6-205ENST00000612349 DMDP11532 3685 aa10.88□□□□□ -0.67
SMAD6-205ENST00000612349 MUC3AQ02505 3323 aa10.87□□□□□ -0.67
SMAD6-205ENST00000612349 ZFHX4Q86UP3 3567 aa10.87□□□□□ -0.67
SMAD6-205ENST00000612349 ASPMQ8IZT6 3477 aa10.86□□□□□ -0.67
SMAD6-205ENST00000612349 TGP01266 2768 aa10.86□□□□□ -0.67
SMAD6-205ENST00000612349 VWFP04275 2813 aa10.86□□□□□ -0.67
SMAD6-205ENST00000612349 PDZD2O15018 2839 aa10.85□□□□□ -0.67
SMAD6-205ENST00000612349 KRTAP13-3Q3SY46 172 aa10.85□□□□□ -0.67
SMAD6-205ENST00000612349 A0A1B0GVY2 172 aa10.84□□□□□ -0.67
SMAD6-205ENST00000612349 C10orf95Q9H7T3 257 aa10.79□□□□□ -0.68
SMAD6-205ENST00000612349 H0YAA0 97 aa10.76□□□□□ -0.69
SMAD6-205ENST00000612349 KRTAP10-10P60014 251 aa10.76□□□□□ -0.69
SMAD6-205ENST00000612349 FBN1P35555 2871 aaKnown RBP10.73□□□□□ -0.69
SMAD6-205ENST00000612349 PRO2289Q9P1D8 64 aa10.69□□□□□ -0.7
SMAD6-205ENST00000612349 OTOGQ6ZRI0 2925 aa10.66□□□□□ -0.7
SMAD6-205ENST00000612349 SMG1Q96Q15 3661 aaKnown RBP10.56□□□□□ -0.72
SMAD6-205ENST00000612349 P0C880 135 aa10.54□□□□□ -0.72
SMAD6-205ENST00000612349 SRRM2Q9UQ35 2752 aaKnown RBP10.53□□□□□ -0.72
SMAD6-205ENST00000612349 CSMD1Q96PZ7 3565 aa10.49□□□□□ -0.73
SMAD6-205ENST00000612349 NBPF19A0A087WUL8 3843 aa10.46□□□□□ -0.73
SMAD6-205ENST00000612349 ZFHX3Q15911 3703 aa10.44□□□□□ -0.74
SMAD6-205ENST00000612349 SVEP1Q4LDE5 3571 aa10.29□□□□□ -0.76
SMAD6-205ENST00000612349 FBN3Q75N90 2809 aa10.23□□□□□ -0.77
SMAD6-205ENST00000612349 SPENQ96T58 3664 aaKnown RBP10.19□□□□□ -0.78
SMAD6-205ENST00000612349 BSNQ9UPA5 3926 aa10.07□□□□□ -0.8
SMAD6-205ENST00000612349 ANK3Q12955 4377 aaKnown RBP10.06□□□□□ -0.8
SMAD6-205ENST00000612349 KRTAP12-2P59991 146 aa10.05□□□□□ -0.8
SMAD6-205ENST00000612349 KRTAP13-4Q3LI77 160 aa10.04□□□□□ -0.8
SMAD6-205ENST00000612349 CSMD2Q7Z408 3487 aa10.02□□□□□ -0.8
SMAD6-205ENST00000612349 COL7A1Q02388 2944 aa10.01□□□□□ -0.81
SMAD6-205ENST00000612349 MEGF8Q7Z7M0 2845 aa10□□□□□ -0.81
SMAD6-205ENST00000612349 CUBNO60494 3623 aa9.96□□□□□ -0.81
SMAD6-205ENST00000612349 KRTAP12-1P59990 96 aa9.96□□□□□ -0.81
SMAD6-205ENST00000612349 KRTAP3-1Q9BYR8 98 aa9.95□□□□□ -0.82
SMAD6-205ENST00000612349 TRRAPQ9Y4A5 3859 aa9.9□□□□□ -0.82
SMAD6-205ENST00000612349 MT1HL1P0DM35 61 aa9.8□□□□□ -0.84
SMAD6-205ENST00000612349 KRTAP10-6P60371 365 aaPredicted RBP9.68□□□□□ -0.86
SMAD6-205ENST00000612349 KRTAP15-1Q3LI76 137 aa9.6□□□□□ -0.87
SMAD6-205ENST00000612349 KRTAP10-4P60372 401 aaPredicted RBP9.59□□□□□ -0.87
SMAD6-205ENST00000612349 KRTAP4-5Q9BYR2 181 aa9.53□□□□□ -0.88
SMAD6-205ENST00000612349 VPS13CQ709C8 3753 aa9.51□□□□□ -0.89
SMAD6-205ENST00000612349 HUWE1Q7Z6Z7 4374 aaKnown RBP9.42□□□□□ -0.9
SMAD6-205ENST00000612349 KRTAP3-2Q9BYR7 98 aa9.32□□□□□ -0.92
SMAD6-205ENST00000612349 KRTAP3-3Q9BYR6 98 aa9.32□□□□□ -0.92
SMAD6-205ENST00000612349 ZNF469Q96JG9 3925 aaPredicted RBP9.29□□□□□ -0.92
SMAD6-205ENST00000612349 KRTAP10-12P60413 245 aa9.27□□□□□ -0.93
SMAD6-205ENST00000612349 AKAP9Q99996 3911 aa9.13□□□□□ -0.95
SMAD6-205ENST00000612349 INE1O15225 51 aa9.06□□□□□ -0.96
SMAD6-205ENST00000612349 ALMS1Q8TCU4 4167 aa9.05□□□□□ -0.96
SMAD6-205ENST00000612349 DNAH5Q8TE73 4624 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms