RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 Q96NJ1 140 aa7.14□□□□□ -1.27
CBWD1-220ENST00000612045 K7EQZ3 153 aa7.12□□□□□ -1.27
CBWD1-220ENST00000612045 Q8N1X5 172 aa7.12□□□□□ -1.27
CBWD1-220ENST00000612045 J3KT08 172 aa7.11□□□□□ -1.27
CBWD1-220ENST00000612045 ASB16-AS1Q495Z4 193 aa7.1□□□□□ -1.27
CBWD1-220ENST00000612045 Q5XG85 94 aa7.1□□□□□ -1.27
CBWD1-220ENST00000612045 A8MWP4 228 aa7.09□□□□□ -1.27
CBWD1-220ENST00000612045 SPINK1P00995 79 aa7.09□□□□□ -1.27
CBWD1-220ENST00000612045 LCE1DQ5T752 114 aa7.09□□□□□ -1.27
CBWD1-220ENST00000612045 LINC00304Q8N9R0 145 aa7.09□□□□□ -1.27
CBWD1-220ENST00000612045 PCP4P48539 62 aa7.08□□□□□ -1.28
CBWD1-220ENST00000612045 LIMD2Q9BT23 127 aa7.08□□□□□ -1.28
CBWD1-220ENST00000612045 MYCBP2O75592 4640 aa7.07□□□□□ -1.28
CBWD1-220ENST00000612045 SPAG11AQ6PDA7 123 aa7.07□□□□□ -1.28
CBWD1-220ENST00000612045 PRR15Q8IV56 129 aa7.07□□□□□ -1.28
CBWD1-220ENST00000612045 BIRC6Q9NR09 4857 aa7.06□□□□□ -1.28
CBWD1-220ENST00000612045 NDUFB1O75438 58 aa7.05□□□□□ -1.28
CBWD1-220ENST00000612045 ATOX1O00244 68 aa7.04□□□□□ -1.28
CBWD1-220ENST00000612045 RPS29P62273 56 aaKnown RBP7.04□□□□□ -1.28
CBWD1-220ENST00000612045 ANAPC13Q9BS18 74 aa7.04□□□□□ -1.28
CBWD1-220ENST00000612045 C1orf195Q5TG92 126 aa7.04□□□□□ -1.28
CBWD1-220ENST00000612045 HCG22E2RYF7 251 aa7.02□□□□□ -1.29
CBWD1-220ENST00000612045 FLG2Q5D862 2391 aaPredicted RBP7.02□□□□□ -1.29
CBWD1-220ENST00000612045 KRTAP10-8P60410 259 aa7.01□□□□□ -1.29
CBWD1-220ENST00000612045 A0A1B0GVX0 72 aa7.01□□□□□ -1.29
CBWD1-220ENST00000612045 IGHV6-1A0A0B4J1U7 121 aa6.99□□□□□ -1.29
CBWD1-220ENST00000612045 HERC2O95714 4834 aa6.99□□□□□ -1.29
CBWD1-220ENST00000612045 WFDC13Q8IUB5 93 aa6.99□□□□□ -1.29
CBWD1-220ENST00000612045 MMP24-AS1A0A0U1RRL7 71 aa6.98□□□□□ -1.29
CBWD1-220ENST00000612045 KRTAP29-1A8MX34 341 aaPredicted RBP6.97□□□□□ -1.29
CBWD1-220ENST00000612045 C8orf17Q9NRJ1 99 aa6.97□□□□□ -1.29
CBWD1-220ENST00000612045 CASC2Q6XLA1 102 aa6.97□□□□□ -1.29
CBWD1-220ENST00000612045 KRTAP19-1Q8IUB9 90 aa6.97□□□□□ -1.29
CBWD1-220ENST00000612045 KRTAP4-5Q9BYR2 181 aa6.96□□□□□ -1.3
CBWD1-220ENST00000612045 ABCA13Q86UQ4 5058 aa6.95□□□□□ -1.3
CBWD1-220ENST00000612045 SMIM20Q8N5G0 67 aa6.95□□□□□ -1.3
CBWD1-220ENST00000612045 SERP2Q8N6R1 65 aa6.95□□□□□ -1.3
CBWD1-220ENST00000612045 KRTAP4-9Q9BYQ8 210 aa6.95□□□□□ -1.3
CBWD1-220ENST00000612045 hDV103S1A0JD37 113 aa6.94□□□□□ -1.3
CBWD1-220ENST00000612045 NOTCH2NLQ7Z3S9 236 aa6.94□□□□□ -1.3
CBWD1-220ENST00000612045 TRAV7A0A075B6U4 112 aa6.94□□□□□ -1.3
CBWD1-220ENST00000612045 OCR1Q9BZK8 76 aa6.94□□□□□ -1.3
CBWD1-220ENST00000612045 COX7CP15954 63 aa6.93□□□□□ -1.3
CBWD1-220ENST00000612045 KRTAP4-2Q9BYR5 136 aa6.93□□□□□ -1.3
CBWD1-220ENST00000612045 MT1HL1P0DM35 61 aa6.92□□□□□ -1.3
CBWD1-220ENST00000612045 C8orf87E5RJ46 101 aa6.92□□□□□ -1.3
CBWD1-220ENST00000612045 CCDC179H3BU77 68 aa6.9□□□□□ -1.3
CBWD1-220ENST00000612045 UQCRQO14949 82 aa6.9□□□□□ -1.3
CBWD1-220ENST00000612045 DMBT1Q9UGM3 2413 aaPredicted RBP6.9□□□□□ -1.31
CBWD1-220ENST00000612045 OXTP01178 125 aa6.9□□□□□ -1.31
CBWD1-220ENST00000612045 LINC00313P59037 77 aa6.9□□□□□ -1.31
CBWD1-220ENST00000612045 TMEM254Q8TBM7 123 aa6.9□□□□□ -1.31
CBWD1-220ENST00000612045 RETNLBQ9BQ08 111 aa6.88□□□□□ -1.31
CBWD1-220ENST00000612045 MRPL34Q9BQ48 92 aaKnown RBP6.88□□□□□ -1.31
CBWD1-220ENST00000612045 KRTAP16-1A8MUX0 517 aa6.83□□□□□ -1.32
CBWD1-220ENST00000612045 NDUFS5O43920 106 aa6.83□□□□□ -1.32
CBWD1-220ENST00000612045 C20orf197Q8N268 126 aa6.83□□□□□ -1.32
CBWD1-220ENST00000612045 TP53AIP1Q9HCN2 124 aa6.83□□□□□ -1.32
CBWD1-220ENST00000612045 C5orf47Q569G3 176 aa6.8□□□□□ -1.32
CBWD1-220ENST00000612045 Q8N9P0 234 aaPredicted RBP6.8□□□□□ -1.32
CBWD1-220ENST00000612045 FP248Q71RG6 208 aaPredicted RBP6.79□□□□□ -1.32
CBWD1-220ENST00000612045 C9orf92A6NGG3 77 aa6.78□□□□□ -1.32
CBWD1-220ENST00000612045 SNURFQ9Y675 71 aa6.78□□□□□ -1.32
CBWD1-220ENST00000612045 KLKP1Q107X0 134 aa6.78□□□□□ -1.32
CBWD1-220ENST00000612045 CYSTM1Q9H1C7 97 aa6.77□□□□□ -1.33
CBWD1-220ENST00000612045 TRAV22A0A0B4J277 110 aa6.76□□□□□ -1.33
CBWD1-220ENST00000612045 A0A0U1RQV1 116 aa6.76□□□□□ -1.33
CBWD1-220ENST00000612045 H0Y9P7 68 aa6.76□□□□□ -1.33
CBWD1-220ENST00000612045 MP68P56378 58 aa6.76□□□□□ -1.33
CBWD1-220ENST00000612045 IGLV7-46A0A075B6I9 117 aa6.73□□□□□ -1.33
CBWD1-220ENST00000612045 Q5W150 140 aa6.73□□□□□ -1.33
CBWD1-220ENST00000612045 LINC00208Q96KT6 92 aa6.73□□□□□ -1.33
CBWD1-220ENST00000612045 H3BPC8 53 aa6.72□□□□□ -1.33
CBWD1-220ENST00000612045 ZCCHC13Q8WW36 166 aaKnown RBP6.72□□□□□ -1.33
CBWD1-220ENST00000612045 KRTAP13-3Q3SY46 172 aa6.71□□□□□ -1.33
CBWD1-220ENST00000612045 PCLOQ9Y6V0 5065 aa6.71□□□□□ -1.33
CBWD1-220ENST00000612045 C20orf166-AS1Q96NR2 134 aa6.71□□□□□ -1.34
CBWD1-220ENST00000612045 A8MUU9 505 aa6.7□□□□□ -1.34
CBWD1-220ENST00000612045 PRR4Q16378 134 aa6.7□□□□□ -1.34
CBWD1-220ENST00000612045 C1orf64Q8NEQ6 169 aa6.7□□□□□ -1.34
CBWD1-220ENST00000612045 H7BZZ5 65 aa6.69□□□□□ -1.34
CBWD1-220ENST00000612045 NDUFC1O43677 76 aa6.69□□□□□ -1.34
CBWD1-220ENST00000612045 KRTAP5-3Q6L8H2 238 aa6.67□□□□□ -1.34
CBWD1-220ENST00000612045 LPAP08519 4548 aa6.66□□□□□ -1.34
CBWD1-220ENST00000612045 Q75L30 129 aa6.65□□□□□ -1.34
CBWD1-220ENST00000612045 LOC101927531A0A1B0GV80 90 aa6.64□□□□□ -1.35
CBWD1-220ENST00000612045 TMEM258P61165 79 aa6.64□□□□□ -1.35
CBWD1-220ENST00000612045 TPRXLQ17RH7 258 aa6.62□□□□□ -1.35
CBWD1-220ENST00000612045 LRP2P98164 4655 aa6.61□□□□□ -1.35
CBWD1-220ENST00000612045 CYP4F30PQ9H0H9 118 aa6.6□□□□□ -1.35
CBWD1-220ENST00000612045 HERC1Q15751 4861 aa6.6□□□□□ -1.35
CBWD1-220ENST00000612045 IGKV2-30P06310 120 aa6.6□□□□□ -1.35
CBWD1-220ENST00000612045 RPL37P61927 97 aaKnown RBP6.58□□□□□ -1.36
CBWD1-220ENST00000612045 PCOTHQ58A44 107 aa6.58□□□□□ -1.36
CBWD1-220ENST00000612045 KRTAP4-11Q9BYQ6 195 aa6.58□□□□□ -1.36
CBWD1-220ENST00000612045 FAM236DA0A1B0GTK5 79 aa6.57□□□□□ -1.36
CBWD1-220ENST00000612045 FAM236CP0DP71 79 aa6.57□□□□□ -1.36
CBWD1-220ENST00000612045 IGKV2D-30A0A075B6S6 120 aa6.57□□□□□ -1.36
CBWD1-220ENST00000612045 KRTAP9-8Q9BYQ0 159 aa6.56□□□□□ -1.36
CBWD1-220ENST00000612045 ATP11AUNQ6ZP68 121 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms