RNA–Protein interactions for RNA: ENST00000609795.5

HNF4A-208, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,192 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-208ENST00000609795 NDUFB1O75438 58 aa9.67□□□□□ -0.86
HNF4A-208ENST00000609795 RPL37P61927 97 aaKnown RBP9.67□□□□□ -0.86
HNF4A-208ENST00000609795 Q6ZVQ6 151 aa9.66□□□□□ -0.86
HNF4A-208ENST00000609795 A8MWP4 228 aa9.65□□□□□ -0.86
HNF4A-208ENST00000609795 LINC00846Q9NV44 126 aa9.65□□□□□ -0.86
HNF4A-208ENST00000609795 C8orf87E5RJ46 101 aa9.64□□□□□ -0.87
HNF4A-208ENST00000609795 NOTCH2NLQ7Z3S9 236 aa9.64□□□□□ -0.87
HNF4A-208ENST00000609795 RNF213Q63HN8 5207 aa9.64□□□□□ -0.87
HNF4A-208ENST00000609795 UBL5Q9BZL1 73 aa9.63□□□□□ -0.87
HNF4A-208ENST00000609795 BPY2O14599 106 aa9.62□□□□□ -0.87
HNF4A-208ENST00000609795 Q75L30 129 aa9.62□□□□□ -0.87
HNF4A-208ENST00000609795 IGKV3D-7A0A0C4DH55 119 aa9.61□□□□□ -0.87
HNF4A-208ENST00000609795 PCOTHQ58A44 107 aa9.61□□□□□ -0.87
HNF4A-208ENST00000609795 C20orf166-AS1Q96NR2 134 aa9.61□□□□□ -0.87
HNF4A-208ENST00000609795 KRTAP16-1A8MUX0 517 aa9.6□□□□□ -0.87
HNF4A-208ENST00000609795 A8MUU9 505 aa9.59□□□□□ -0.87
HNF4A-208ENST00000609795 PRR15Q8IV56 129 aa9.59□□□□□ -0.87
HNF4A-208ENST00000609795 ATP11AUNQ6ZP68 121 aa9.56□□□□□ -0.88
HNF4A-208ENST00000609795 C8orf17Q9NRJ1 99 aa9.56□□□□□ -0.88
HNF4A-208ENST00000609795 ACYP1P07311 99 aa9.55□□□□□ -0.88
HNF4A-208ENST00000609795 K7EQZ3 153 aa9.54□□□□□ -0.88
HNF4A-208ENST00000609795 KRTAP4-1Q9BYQ7 146 aa9.53□□□□□ -0.88
HNF4A-208ENST00000609795 MUC2Q02817 5179 aa9.52□□□□□ -0.89
HNF4A-208ENST00000609795 FAM240AA0A1B0GVK7 77 aa9.51□□□□□ -0.89
HNF4A-208ENST00000609795 Q8N9L7 120 aa9.49□□□□□ -0.89
HNF4A-208ENST00000609795 MMP24-AS1A0A0U1RRL7 71 aa9.48□□□□□ -0.89
HNF4A-208ENST00000609795 Q8N9P0 234 aaPredicted RBP9.46□□□□□ -0.9
HNF4A-208ENST00000609795 CXCL6P80162 114 aa9.45□□□□□ -0.9
HNF4A-208ENST00000609795 hDV103S1A0JD37 113 aa9.44□□□□□ -0.9
HNF4A-208ENST00000609795 TMEM254Q8TBM7 123 aa9.44□□□□□ -0.9
HNF4A-208ENST00000609795 MRPL34Q9BQ48 92 aaKnown RBP9.43□□□□□ -0.9
HNF4A-208ENST00000609795 A0A0U1RQV1 116 aa9.4□□□□□ -0.9
HNF4A-208ENST00000609795 J3QR89 54 aa9.4□□□□□ -0.9
HNF4A-208ENST00000609795 CASC2Q6XLA1 102 aa9.39□□□□□ -0.91
HNF4A-208ENST00000609795 WFDC13Q8IUB5 93 aa9.39□□□□□ -0.91
HNF4A-208ENST00000609795 ZCCHC13Q8WW36 166 aaKnown RBP9.37□□□□□ -0.91
HNF4A-208ENST00000609795 HCG22E2RYF7 251 aa9.35□□□□□ -0.91
HNF4A-208ENST00000609795 ATP5EP2Q5VTU8 51 aa9.35□□□□□ -0.91
HNF4A-208ENST00000609795 NDUFS5O43920 106 aa9.34□□□□□ -0.91
HNF4A-208ENST00000609795 LINC00643Q86TS7 51 aa9.34□□□□□ -0.91
HNF4A-208ENST00000609795 FAT4Q6V0I7 4981 aa9.27□□□□□ -0.93
HNF4A-208ENST00000609795 HIST1H4AP62805 103 aaKnown RBP9.26□□□□□ -0.93
HNF4A-208ENST00000609795 KRTAP19-2Q3LHN2 52 aa9.24□□□□□ -0.93
HNF4A-208ENST00000609795 K7ERU9 68 aa9.23□□□□□ -0.93
HNF4A-208ENST00000609795 SPINK7P58062 85 aa9.21□□□□□ -0.94
HNF4A-208ENST00000609795 LCE2CQ5TA81 110 aa9.2□□□□□ -0.94
HNF4A-208ENST00000609795 Q5W150 140 aa9.2□□□□□ -0.94
HNF4A-208ENST00000609795 TP53AIP1Q9HCN2 124 aa9.18□□□□□ -0.94
HNF4A-208ENST00000609795 COX6B2Q6YFQ2 88 aa9.17□□□□□ -0.94
HNF4A-208ENST00000609795 HRES1P13985 223 aa9.16□□□□□ -0.94
HNF4A-208ENST00000609795 A0A087WVE0 104 aa9.15□□□□□ -0.94
HNF4A-208ENST00000609795 LCE2AQ5TA79 106 aaPredicted RBP9.14□□□□□ -0.95
HNF4A-208ENST00000609795 MPLKIPQ8TAP9 179 aa9.11□□□□□ -0.95
HNF4A-208ENST00000609795 RBM12B-AS1Q9P1G2 102 aa9.11□□□□□ -0.95
HNF4A-208ENST00000609795 IGKV2D-30A0A075B6S6 120 aa9.08□□□□□ -0.96
HNF4A-208ENST00000609795 IGKV2-30P06310 120 aa9.08□□□□□ -0.96
HNF4A-208ENST00000609795 C7orf65Q6ZTY9 151 aa9.07□□□□□ -0.96
HNF4A-208ENST00000609795 MT1HP80294 61 aa9.06□□□□□ -0.96
HNF4A-208ENST00000609795 FAM236DA0A1B0GTK5 79 aa9.05□□□□□ -0.96
HNF4A-208ENST00000609795 FAM236CP0DP71 79 aa9.05□□□□□ -0.96
HNF4A-208ENST00000609795 MT-ATP8P03928 68 aa9.03□□□□□ -0.96
HNF4A-208ENST00000609795 IMUPQ9GZP8 106 aa9.03□□□□□ -0.96
HNF4A-208ENST00000609795 UQCRQO14949 82 aa9.02□□□□□ -0.97
HNF4A-208ENST00000609795 TRAV22A0A0B4J277 110 aa8.99□□□□□ -0.97
HNF4A-208ENST00000609795 FLGP20930 4061 aaPredicted RBP8.95□□□□□ -0.98
HNF4A-208ENST00000609795 OCR1Q9BZK8 76 aa8.95□□□□□ -0.98
HNF4A-208ENST00000609795 M0R2T5 61 aa8.94□□□□□ -0.98
HNF4A-208ENST00000609795 SCGB1A1P11684 91 aa8.94□□□□□ -0.98
HNF4A-208ENST00000609795 H0Y9P7 68 aa8.93□□□□□ -0.98
HNF4A-208ENST00000609795 ATOX1O00244 68 aa8.92□□□□□ -0.98
HNF4A-208ENST00000609795 LOC101927531A0A1B0GV80 90 aa8.91□□□□□ -0.98
HNF4A-208ENST00000609795 CYP4F30PQ9H0H9 118 aa8.91□□□□□ -0.98
HNF4A-208ENST00000609795 C4orf26Q17RF5 130 aa8.89□□□□□ -0.99
HNF4A-208ENST00000609795 C5orf47Q569G3 176 aa8.86□□□□□ -0.99
HNF4A-208ENST00000609795 MP68P56378 58 aa8.85□□□□□ -0.99
HNF4A-208ENST00000609795 FAM236AA0A1B0GUQ0 79 aa8.84□□□□□ -0.99
HNF4A-208ENST00000609795 FAM236BA0A1B0GV22 79 aa8.84□□□□□ -0.99
HNF4A-208ENST00000609795 H1FX-AS1Q4G0G2 97 aa8.84□□□□□ -0.99
HNF4A-208ENST00000609795 C1orf64Q8NEQ6 169 aa8.84□□□□□ -0.99
HNF4A-208ENST00000609795 LINC00208Q96KT6 92 aa8.83□□□□□ -1
HNF4A-208ENST00000609795 KRTAP10-6P60371 365 aaPredicted RBP8.82□□□□□ -1
HNF4A-208ENST00000609795 LORP23490 312 aaPredicted RBP8.79□□□□□ -1
HNF4A-208ENST00000609795 SMIM20Q8N5G0 67 aa8.79□□□□□ -1
HNF4A-208ENST00000609795 H3BPC8 53 aa8.77□□□□□ -1.01
HNF4A-208ENST00000609795 KRTAP3-1Q9BYR8 98 aa8.77□□□□□ -1.01
HNF4A-208ENST00000609795 TRAV7A0A075B6U4 112 aa8.76□□□□□ -1.01
HNF4A-208ENST00000609795 KLKP1Q107X0 134 aa8.72□□□□□ -1.01
HNF4A-208ENST00000609795 KRTAP9-8Q9BYQ0 159 aa8.64□□□□□ -1.03
HNF4A-208ENST00000609795 S4R3F8 94 aa8.62□□□□□ -1.03
HNF4A-208ENST00000609795 SERP2Q8N6R1 65 aa8.61□□□□□ -1.03
HNF4A-208ENST00000609795 A8MUN3 132 aa8.58□□□□□ -1.04
HNF4A-208ENST00000609795 LCA10Q71F78 164 aa8.57□□□□□ -1.04
HNF4A-208ENST00000609795 MT2AP02795 61 aa8.55□□□□□ -1.04
HNF4A-208ENST00000609795 LCE2DQ5TA82 110 aaPredicted RBP8.54□□□□□ -1.04
HNF4A-208ENST00000609795 SNURFQ9Y675 71 aa8.53□□□□□ -1.04
HNF4A-208ENST00000609795 CSAG1Q6PB30 78 aa8.52□□□□□ -1.05
HNF4A-208ENST00000609795 KRTAP9-2Q9BYQ4 174 aa8.52□□□□□ -1.05
HNF4A-208ENST00000609795 C20orf197Q8N268 126 aa8.51□□□□□ -1.05
HNF4A-208ENST00000609795 KRTAP3-3Q9BYR6 98 aa8.49□□□□□ -1.05
HNF4A-208ENST00000609795 MT1FP04733 61 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms