RNA–Protein interactions for RNA: ENST00000602056.1

GTPBP3-227, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 2

Gene GTPBP3, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-227ENST00000602056 HSD52Q0P140 79 aa11.4□□□□□ -0.58
GTPBP3-227ENST00000602056 UBE2V1Q13404 147 aa11.4□□□□□ -0.58
GTPBP3-227ENST00000602056 A0A1B0GVX0 72 aa11.39□□□□□ -0.59
GTPBP3-227ENST00000602056 C8orf87E5RJ46 101 aa11.37□□□□□ -0.59
GTPBP3-227ENST00000602056 COX6CP09669 75 aa11.37□□□□□ -0.59
GTPBP3-227ENST00000602056 VPS25Q9BRG1 176 aa11.35□□□□□ -0.59
GTPBP3-227ENST00000602056 ZCCHC13Q8WW36 166 aaKnown RBP11.33□□□□□ -0.6
GTPBP3-227ENST00000602056 PYY3Q5JQD4 70 aa11.32□□□□□ -0.6
GTPBP3-227ENST00000602056 SPINK7P58062 85 aa11.31□□□□□ -0.6
GTPBP3-227ENST00000602056 RBM3P98179 157 aaKnown RBP11.3□□□□□ -0.6
GTPBP3-227ENST00000602056 DSCR8Q96T75 97 aa11.26□□□□□ -0.61
GTPBP3-227ENST00000602056 MTURNQ8N3F0 131 aa11.25□□□□□ -0.61
GTPBP3-227ENST00000602056 Q8N9P0 234 aaPredicted RBP11.24□□□□□ -0.61
GTPBP3-227ENST00000602056 J3KT08 172 aa11.23□□□□□ -0.61
GTPBP3-227ENST00000602056 SCGB1C2P0DMR2 95 aa11.22□□□□□ -0.61
GTPBP3-227ENST00000602056 Q6ZQT0 140 aa11.22□□□□□ -0.61
GTPBP3-227ENST00000602056 BAALC-AS2P0C853 105 aa11.2□□□□□ -0.62
GTPBP3-227ENST00000602056 MACF1Q9UPN3 7388 aaKnown RBP11.19□□□□□ -0.62
GTPBP3-227ENST00000602056 C9JAW5 83 aa11.19□□□□□ -0.62
GTPBP3-227ENST00000602056 UQCR10Q9UDW1 63 aa11.19□□□□□ -0.62
GTPBP3-227ENST00000602056 KRTAP19-6Q3LI70 58 aa11.16□□□□□ -0.62
GTPBP3-227ENST00000602056 C21orf62-AS1Q17RA5 79 aa11.15□□□□□ -0.62
GTPBP3-227ENST00000602056 WFDC13Q8IUB5 93 aa11.15□□□□□ -0.62
GTPBP3-227ENST00000602056 C8orf17Q9NRJ1 99 aa11.15□□□□□ -0.62
GTPBP3-227ENST00000602056 SYNE2Q8WXH0 6885 aaKnown RBP11.15□□□□□ -0.62
GTPBP3-227ENST00000602056 NDUFB1O75438 58 aa11.13□□□□□ -0.63
GTPBP3-227ENST00000602056 IGKV3D-7A0A0C4DH55 119 aa11.11□□□□□ -0.63
GTPBP3-227ENST00000602056 A8MWP4 228 aa11.11□□□□□ -0.63
GTPBP3-227ENST00000602056 LYRM7Q5U5X0 104 aa11.06□□□□□ -0.64
GTPBP3-227ENST00000602056 LOC110117498A0A087WWA1 95 aa11.04□□□□□ -0.64
GTPBP3-227ENST00000602056 Q6ZVQ6 151 aa11.04□□□□□ -0.64
GTPBP3-227ENST00000602056 LINC00846Q9NV44 126 aa11.03□□□□□ -0.64
GTPBP3-227ENST00000602056 A0A1B0GW54 56 aa11.01□□□□□ -0.65
GTPBP3-227ENST00000602056 JMJD7-PLA2G4BH0Y9G9 81 aa11.01□□□□□ -0.65
GTPBP3-227ENST00000602056 NAA38Q9BRA0 125 aaKnown RBP11.01□□□□□ -0.65
GTPBP3-227ENST00000602056 PRR15Q8IV56 129 aa11□□□□□ -0.65
GTPBP3-227ENST00000602056 ATXN8Q156A1 80 aa10.98□□□□□ -0.65
GTPBP3-227ENST00000602056 C14orf132Q9NPU4 83 aa10.97□□□□□ -0.65
GTPBP3-227ENST00000602056 MMP24-AS1A0A0U1RRL7 71 aa10.95□□□□□ -0.66
GTPBP3-227ENST00000602056 PDE6GP18545 87 aa10.95□□□□□ -0.66
GTPBP3-227ENST00000602056 H1FX-AS1Q4G0G2 97 aa10.93□□□□□ -0.66
GTPBP3-227ENST00000602056 TMA7Q9Y2S6 64 aaKnown RBP10.93□□□□□ -0.66
GTPBP3-227ENST00000602056 TMEM254Q8TBM7 123 aa10.92□□□□□ -0.66
GTPBP3-227ENST00000602056 MRPL34Q9BQ48 92 aaKnown RBP10.92□□□□□ -0.66
GTPBP3-227ENST00000602056 NREPQ16612 68 aa10.9□□□□□ -0.66
GTPBP3-227ENST00000602056 M0R143 59 aa10.85□□□□□ -0.67
GTPBP3-227ENST00000602056 K7EQZ3 153 aa10.84□□□□□ -0.67
GTPBP3-227ENST00000602056 hDV103S1A0JD37 113 aa10.83□□□□□ -0.68
GTPBP3-227ENST00000602056 KRTAP6-3Q3LI67 103 aa10.81□□□□□ -0.68
GTPBP3-227ENST00000602056 NDUFS5O43920 106 aa10.8□□□□□ -0.68
GTPBP3-227ENST00000602056 Q5W150 140 aa10.8□□□□□ -0.68
GTPBP3-227ENST00000602056 IGKV2D-30A0A075B6S6 120 aa10.78□□□□□ -0.68
GTPBP3-227ENST00000602056 IGKV2-30P06310 120 aa10.78□□□□□ -0.68
GTPBP3-227ENST00000602056 C7orf65Q6ZTY9 151 aa10.72□□□□□ -0.69
GTPBP3-227ENST00000602056 BPY2O14599 106 aa10.67□□□□□ -0.7
GTPBP3-227ENST00000602056 C4orf26Q17RF5 130 aa10.65□□□□□ -0.7
GTPBP3-227ENST00000602056 Q8N9L7 120 aa10.65□□□□□ -0.7
GTPBP3-227ENST00000602056 H3BT86 120 aa10.63□□□□□ -0.71
GTPBP3-227ENST00000602056 HCG22E2RYF7 251 aa10.61□□□□□ -0.71
GTPBP3-227ENST00000602056 BATFQ16520 125 aa10.6□□□□□ -0.71
GTPBP3-227ENST00000602056 CASC2Q6XLA1 102 aa10.6□□□□□ -0.71
GTPBP3-227ENST00000602056 C5orf47Q569G3 176 aa10.57□□□□□ -0.72
GTPBP3-227ENST00000602056 KRTAP3-1Q9BYR8 98 aa10.56□□□□□ -0.72
GTPBP3-227ENST00000602056 C9orf118A6NHY6 69 aa10.55□□□□□ -0.72
GTPBP3-227ENST00000602056 MT1BP07438 61 aa10.55□□□□□ -0.72
GTPBP3-227ENST00000602056 NEBP20929 6669 aa10.55□□□□□ -0.72
GTPBP3-227ENST00000602056 SMIM6P0DI80 62 aa10.54□□□□□ -0.72
GTPBP3-227ENST00000602056 A0A1W2PPM0 123 aa10.52□□□□□ -0.73
GTPBP3-227ENST00000602056 TAX1BP3O14907 124 aa10.52□□□□□ -0.73
GTPBP3-227ENST00000602056 CXCL6P80162 114 aa10.51□□□□□ -0.73
GTPBP3-227ENST00000602056 TSTD3H0UI37 97 aa10.49□□□□□ -0.73
GTPBP3-227ENST00000602056 FAM236AA0A1B0GUQ0 79 aa10.48□□□□□ -0.73
GTPBP3-227ENST00000602056 FAM236BA0A1B0GV22 79 aa10.48□□□□□ -0.73
GTPBP3-227ENST00000602056 A6NN06 94 aa10.48□□□□□ -0.73
GTPBP3-227ENST00000602056 KRTAP19-8Q3LI54 63 aa10.46□□□□□ -0.73
GTPBP3-227ENST00000602056 SPRR2GQ9BYE4 73 aa10.44□□□□□ -0.74
GTPBP3-227ENST00000602056 Q5VV11 94 aa10.43□□□□□ -0.74
GTPBP3-227ENST00000602056 S4R3F8 94 aa10.43□□□□□ -0.74
GTPBP3-227ENST00000602056 SMCPP49901 116 aaPredicted RBP10.41□□□□□ -0.74
GTPBP3-227ENST00000602056 LCA10Q71F78 164 aa10.4□□□□□ -0.74
GTPBP3-227ENST00000602056 CSAG1Q6PB30 78 aa10.39□□□□□ -0.75
GTPBP3-227ENST00000602056 C1orf64Q8NEQ6 169 aa10.39□□□□□ -0.75
GTPBP3-227ENST00000602056 MUC12Q9UKN1 5478 aa10.39□□□□□ -0.75
GTPBP3-227ENST00000602056 KRTAP10-5P60370 271 aa10.34□□□□□ -0.75
GTPBP3-227ENST00000602056 SPCS1Q9Y6A9 102 aa10.33□□□□□ -0.76
GTPBP3-227ENST00000602056 UBL5Q9BZL1 73 aa10.3□□□□□ -0.76
GTPBP3-227ENST00000602056 KLKP1Q107X0 134 aa10.28□□□□□ -0.76
GTPBP3-227ENST00000602056 KRTAP3-3Q9BYR6 98 aa10.28□□□□□ -0.76
GTPBP3-227ENST00000602056 PRO0461Q9UI25 63 aa10.26□□□□□ -0.77
GTPBP3-227ENST00000602056 KRTAP5-9P26371 169 aa10.19□□□□□ -0.78
GTPBP3-227ENST00000602056 TP53AIP1Q9HCN2 124 aa10.19□□□□□ -0.78
GTPBP3-227ENST00000602056 A0A087WVE0 104 aa10.17□□□□□ -0.78
GTPBP3-227ENST00000602056 LOC105371267A0A1B0GV96 52 aa10.16□□□□□ -0.78
GTPBP3-227ENST00000602056 KRTAP20-1Q3LI63 56 aa10.15□□□□□ -0.78
GTPBP3-227ENST00000602056 KMT2DO14686 5537 aa10.14□□□□□ -0.79
GTPBP3-227ENST00000602056 CYP4F30PQ9H0H9 118 aa10.12□□□□□ -0.79
GTPBP3-227ENST00000602056 K7EP34 96 aa10.1□□□□□ -0.79
GTPBP3-227ENST00000602056 CRIPTQ9P021 101 aa10.06□□□□□ -0.8
GTPBP3-227ENST00000602056 MDN1Q9NU22 5596 aa10.06□□□□□ -0.8
GTPBP3-227ENST00000602056 COL5A1-AS1Q5SY13 56 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms