RNA–Protein interactions for RNA: ENST00000601973.1

ZC3H4-205, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS ALT2 TSL 5

Gene ZC3H4, Length 4,895 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-205ENST00000601973 CELSR2Q9HCU4 2923 aa8.89□□□□□ -0.99
ZC3H4-205ENST00000601973 SPATA8Q6RVD6 105 aa8.88□□□□□ -0.99
ZC3H4-205ENST00000601973 KRTAP1-5Q9BYS1 174 aa8.87□□□□□ -0.99
ZC3H4-205ENST00000601973 NIPBLQ6KC79 2804 aaeCLIP8.87□□□□□ -0.992e-7■□□□□ 9.2
ZC3H4-205ENST00000601973 KRTAP4-16G5E9R7 235 aaPredicted RBP8.86□□□□□ -0.99
ZC3H4-205ENST00000601973 PLAC4Q8WY50 150 aa8.86□□□□□ -0.99
ZC3H4-205ENST00000601973 CRYBG3Q68DQ2 2970 aa8.85□□□□□ -0.99
ZC3H4-205ENST00000601973 PANO1I0J062 215 aa8.84□□□□□ -0.99
ZC3H4-205ENST00000601973 NF1P21359 2839 aa8.83□□□□□ -1
ZC3H4-205ENST00000601973 LCE6AA0A183 80 aa8.82□□□□□ -1
ZC3H4-205ENST00000601973 KRTAP16-1A8MUX0 517 aa8.81□□□□□ -1
ZC3H4-205ENST00000601973 Q5VSD8 79 aa8.81□□□□□ -1
ZC3H4-205ENST00000601973 A6NN06 94 aa8.81□□□□□ -1
ZC3H4-205ENST00000601973 ADM2Q7Z4H4 148 aa8.8□□□□□ -1
ZC3H4-205ENST00000601973 KMT2BQ9UMN6 2715 aaPredicted RBP8.79□□□□□ -1
ZC3H4-205ENST00000601973 KRTAP10-1P60331 282 aa8.79□□□□□ -1
ZC3H4-205ENST00000601973 DCHS2Q6V1P9 2916 aa8.78□□□□□ -1
ZC3H4-205ENST00000601973 FBN2P35556 2912 aa8.76□□□□□ -1.01
ZC3H4-205ENST00000601973 MUC3AQ02505 3323 aa8.76□□□□□ -1.01
ZC3H4-205ENST00000601973 TENM4Q6N022 2769 aa8.72□□□□□ -1.01
ZC3H4-205ENST00000601973 KRTAP25-1Q3LHN0 102 aa8.72□□□□□ -1.01
ZC3H4-205ENST00000601973 A8MU10 97 aa8.71□□□□□ -1.02
ZC3H4-205ENST00000601973 RPS29P62273 56 aaKnown RBP8.71□□□□□ -1.02
ZC3H4-205ENST00000601973 RELNP78509 3460 aa8.7□□□□□ -1.02
ZC3H4-205ENST00000601973 KRTAP10-2P60368 255 aa8.7□□□□□ -1.02
ZC3H4-205ENST00000601973 A0A087X002 238 aa8.64□□□□□ -1.03
ZC3H4-205ENST00000601973 WDFY3Q8IZQ1 3526 aa8.64□□□□□ -1.03
ZC3H4-205ENST00000601973 MXRA5Q9NR99 2828 aa8.63□□□□□ -1.03
ZC3H4-205ENST00000601973 LAMA5O15230 3695 aa8.61□□□□□ -1.03
ZC3H4-205ENST00000601973 NOTCH2NLQ7Z3S9 236 aa8.61□□□□□ -1.03
ZC3H4-205ENST00000601973 DCHS1Q96JQ0 3298 aa8.61□□□□□ -1.03
ZC3H4-205ENST00000601973 A8MUU9 505 aa8.56□□□□□ -1.04
ZC3H4-205ENST00000601973 DMDP11532 3685 aa8.55□□□□□ -1.04
ZC3H4-205ENST00000601973 ASPMQ8IZT6 3477 aa8.55□□□□□ -1.04
ZC3H4-205ENST00000601973 C20orf166-AS1Q96NR2 134 aa8.54□□□□□ -1.04
ZC3H4-205ENST00000601973 NDUFAF8A1L188 74 aa8.49□□□□□ -1.05
ZC3H4-205ENST00000601973 Q6ZRN7 208 aaPredicted RBP8.44□□□□□ -1.06
ZC3H4-205ENST00000601973 KRTAP7-1Q8IUC3 87 aa8.44□□□□□ -1.06
ZC3H4-205ENST00000601973 TNP1P09430 55 aa8.44□□□□□ -1.06
ZC3H4-205ENST00000601973 ZFHX4Q86UP3 3567 aa8.42□□□□□ -1.06
ZC3H4-205ENST00000601973 KRTAP11-1Q8IUC1 163 aa8.41□□□□□ -1.06
ZC3H4-205ENST00000601973 KRTAP13-1Q8IUC0 172 aa8.41□□□□□ -1.06
ZC3H4-205ENST00000601973 KRTAP13-2Q52LG2 175 aa8.37□□□□□ -1.07
ZC3H4-205ENST00000601973 CELSR1Q9NYQ6 3014 aa8.34□□□□□ -1.07
ZC3H4-205ENST00000601973 PP632Q6XCG6 107 aa8.34□□□□□ -1.07
ZC3H4-205ENST00000601973 PDZD2O15018 2839 aa8.32□□□□□ -1.08
ZC3H4-205ENST00000601973 TENM3Q9P273 2699 aa8.29□□□□□ -1.08
ZC3H4-205ENST00000601973 TENM1Q9UKZ4 2725 aa8.28□□□□□ -1.08
ZC3H4-205ENST00000601973 KRTAP21-3Q3LHN1 58 aa8.27□□□□□ -1.09
ZC3H4-205ENST00000601973 C10orf95Q9H7T3 257 aa8.26□□□□□ -1.09
ZC3H4-205ENST00000601973 OTOGQ6ZRI0 2925 aa8.2□□□□□ -1.1
ZC3H4-205ENST00000601973 SMG1Q96Q15 3661 aaKnown RBP8.17□□□□□ -1.1
ZC3H4-205ENST00000601973 VWFP04275 2813 aa8.14□□□□□ -1.11
ZC3H4-205ENST00000601973 FBN1P35555 2871 aaKnown RBP8.13□□□□□ -1.11
ZC3H4-205ENST00000601973 CSMD1Q96PZ7 3565 aa8.11□□□□□ -1.11
ZC3H4-205ENST00000601973 PKD1L1Q8TDX9 2849 aa8.09□□□□□ -1.11
ZC3H4-205ENST00000601973 NBPF19A0A087WUL8 3843 aa8.09□□□□□ -1.11
ZC3H4-205ENST00000601973 TENM2Q9NT68 2774 aa8.07□□□□□ -1.12
ZC3H4-205ENST00000601973 P0C880 135 aa8.07□□□□□ -1.12
ZC3H4-205ENST00000601973 KRTAP10-8P60410 259 aa8.01□□□□□ -1.13
ZC3H4-205ENST00000601973 ZFHX3Q15911 3703 aa8.01□□□□□ -1.13
ZC3H4-205ENST00000601973 SVEP1Q4LDE5 3571 aa7.99□□□□□ -1.13
ZC3H4-205ENST00000601973 TGP01266 2768 aa7.98□□□□□ -1.13
ZC3H4-205ENST00000601973 H0YAA0 97 aa7.97□□□□□ -1.13
ZC3H4-205ENST00000601973 XP32Q5T750 250 aa7.95□□□□□ -1.14
ZC3H4-205ENST00000601973 SPENQ96T58 3664 aaKnown RBP7.94□□□□□ -1.14
ZC3H4-205ENST00000601973 CSMD2Q7Z408 3487 aa7.93□□□□□ -1.14
ZC3H4-205ENST00000601973 KRTAP1-4P0C5Y4 121 aa7.92□□□□□ -1.14
ZC3H4-205ENST00000601973 TPRXLQ17RH7 258 aa7.85□□□□□ -1.15
ZC3H4-205ENST00000601973 BSNQ9UPA5 3926 aa7.84□□□□□ -1.15
ZC3H4-205ENST00000601973 PRO2289Q9P1D8 64 aa7.84□□□□□ -1.16
ZC3H4-205ENST00000601973 CUBNO60494 3623 aa7.83□□□□□ -1.16
ZC3H4-205ENST00000601973 ANK3Q12955 4377 aaKnown RBP7.78□□□□□ -1.16
ZC3H4-205ENST00000601973 KRTAP13-3Q3SY46 172 aa7.74□□□□□ -1.17
ZC3H4-205ENST00000601973 A0A1B0GVY2 172 aa7.73□□□□□ -1.17
ZC3H4-205ENST00000601973 KRTAP10-10P60014 251 aa7.72□□□□□ -1.17
ZC3H4-205ENST00000601973 TRRAPQ9Y4A5 3859 aa7.67□□□□□ -1.18
ZC3H4-205ENST00000601973 SRRM2Q9UQ35 2752 aaKnown RBP7.56□□□□□ -1.2
ZC3H4-205ENST00000601973 FBN3Q75N90 2809 aa7.54□□□□□ -1.2
ZC3H4-205ENST00000601973 KRTAP13-4Q3LI77 160 aa7.48□□□□□ -1.21
ZC3H4-205ENST00000601973 MEGF8Q7Z7M0 2845 aa7.42□□□□□ -1.22
ZC3H4-205ENST00000601973 KRTAP12-2P59991 146 aa7.42□□□□□ -1.22
ZC3H4-205ENST00000601973 KRTAP12-1P59990 96 aa7.35□□□□□ -1.23
ZC3H4-205ENST00000601973 VPS13CQ709C8 3753 aa7.35□□□□□ -1.23
ZC3H4-205ENST00000601973 COL7A1Q02388 2944 aa7.33□□□□□ -1.24
ZC3H4-205ENST00000601973 ZNF469Q96JG9 3925 aaPredicted RBP7.3□□□□□ -1.24
ZC3H4-205ENST00000601973 KRTAP3-1Q9BYR8 98 aa7.24□□□□□ -1.25
ZC3H4-205ENST00000601973 HUWE1Q7Z6Z7 4374 aaKnown RBP7.18□□□□□ -1.26
ZC3H4-205ENST00000601973 KRTAP15-1Q3LI76 137 aa7.17□□□□□ -1.26
ZC3H4-205ENST00000601973 AKAP9Q99996 3911 aa7.1□□□□□ -1.27
ZC3H4-205ENST00000601973 INE1O15225 51 aa7.1□□□□□ -1.27
ZC3H4-205ENST00000601973 KRTAP10-6P60371 365 aaPredicted RBP7.09□□□□□ -1.27
ZC3H4-205ENST00000601973 DNAH9Q9NYC9 4486 aa6.96□□□□□ -1.3
ZC3H4-205ENST00000601973 MT1HL1P0DM35 61 aa6.94□□□□□ -1.3
ZC3H4-205ENST00000601973 KRTAP10-4P60372 401 aaPredicted RBP6.94□□□□□ -1.3
ZC3H4-205ENST00000601973 CSMD3Q7Z407 3707 aa6.89□□□□□ -1.31
ZC3H4-205ENST00000601973 KRTAP3-2Q9BYR7 98 aa6.85□□□□□ -1.31
ZC3H4-205ENST00000601973 DNHD1Q96M86 4753 aa6.84□□□□□ -1.31
ZC3H4-205ENST00000601973 KRTAP4-5Q9BYR2 181 aa6.79□□□□□ -1.32
ZC3H4-205ENST00000601973 KRTAP3-3Q9BYR6 98 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms