RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 C9orf92A6NGG3 77 aa12.64□□□□□ -0.39
IRF3-227ENST00000600911 K7EQZ3 153 aa12.64□□□□□ -0.39
IRF3-227ENST00000600911 KRTAP13-3Q3SY46 172 aa12.63□□□□□ -0.39
IRF3-227ENST00000600911 A8MWP4 228 aa12.62□□□□□ -0.39
IRF3-227ENST00000600911 LRP2P98164 4655 aa12.62□□□□□ -0.39
IRF3-227ENST00000600911 IGHV6-1A0A0B4J1U7 121 aa12.61□□□□□ -0.39
IRF3-227ENST00000600911 A0A1B0GVX0 72 aa12.6□□□□□ -0.39
IRF3-227ENST00000600911 LINC00643Q86TS7 51 aa12.58□□□□□ -0.4
IRF3-227ENST00000600911 PRR15Q8IV56 129 aa12.58□□□□□ -0.4
IRF3-227ENST00000600911 CXCL6P80162 114 aa12.56□□□□□ -0.4
IRF3-227ENST00000600911 TPRXLQ17RH7 258 aa12.55□□□□□ -0.4
IRF3-227ENST00000600911 NDUFB1O75438 58 aa12.51□□□□□ -0.41
IRF3-227ENST00000600911 KRTAP16-1A8MUX0 517 aa12.51□□□□□ -0.41
IRF3-227ENST00000600911 MMP24-AS1A0A0U1RRL7 71 aa12.5□□□□□ -0.41
IRF3-227ENST00000600911 C8orf17Q9NRJ1 99 aa12.5□□□□□ -0.41
IRF3-227ENST00000600911 LINC00313P59037 77 aa12.48□□□□□ -0.41
IRF3-227ENST00000600911 ATP5EP2Q5VTU8 51 aa12.48□□□□□ -0.41
IRF3-227ENST00000600911 MT-ATP8P03928 68 aa12.48□□□□□ -0.41
IRF3-227ENST00000600911 XP32Q5T750 250 aa12.48□□□□□ -0.41
IRF3-227ENST00000600911 A0A087WVE0 104 aa12.44□□□□□ -0.42
IRF3-227ENST00000600911 C8orf87E5RJ46 101 aa12.44□□□□□ -0.42
IRF3-227ENST00000600911 HIST1H4AP62805 103 aaKnown RBP12.4□□□□□ -0.42
IRF3-227ENST00000600911 WFDC13Q8IUB5 93 aa12.4□□□□□ -0.42
IRF3-227ENST00000600911 hDV103S1A0JD37 113 aa12.35□□□□□ -0.43
IRF3-227ENST00000600911 HCG22E2RYF7 251 aa12.35□□□□□ -0.43
IRF3-227ENST00000600911 MUC17Q685J3 4493 aa12.34□□□□□ -0.43
IRF3-227ENST00000600911 CASC2Q6XLA1 102 aa12.33□□□□□ -0.44
IRF3-227ENST00000600911 C20orf166-AS1Q96NR2 134 aa12.33□□□□□ -0.44
IRF3-227ENST00000600911 A8MUU9 505 aa12.32□□□□□ -0.44
IRF3-227ENST00000600911 TMEM254Q8TBM7 123 aa12.32□□□□□ -0.44
IRF3-227ENST00000600911 MRPL34Q9BQ48 92 aaKnown RBP12.3□□□□□ -0.44
IRF3-227ENST00000600911 RPL37P61927 97 aaKnown RBP12.29□□□□□ -0.44
IRF3-227ENST00000600911 Q8N9P0 234 aaPredicted RBP12.29□□□□□ -0.44
IRF3-227ENST00000600911 UBR4Q5T4S7 5183 aa12.28□□□□□ -0.44
IRF3-227ENST00000600911 Q75L30 129 aa12.27□□□□□ -0.44
IRF3-227ENST00000600911 IMUPQ9GZP8 106 aa12.22□□□□□ -0.45
IRF3-227ENST00000600911 NDUFS5O43920 106 aa12.18□□□□□ -0.46
IRF3-227ENST00000600911 PCOTHQ58A44 107 aa12.18□□□□□ -0.46
IRF3-227ENST00000600911 Q5W150 140 aa12.12□□□□□ -0.47
IRF3-227ENST00000600911 KRTAP4-1Q9BYQ7 146 aa12.11□□□□□ -0.47
IRF3-227ENST00000600911 FAM236AA0A1B0GUQ0 79 aa12.11□□□□□ -0.47
IRF3-227ENST00000600911 FAM236BA0A1B0GV22 79 aa12.11□□□□□ -0.47
IRF3-227ENST00000600911 RNF213Q63HN8 5207 aa12.09□□□□□ -0.47
IRF3-227ENST00000600911 ZCCHC13Q8WW36 166 aaKnown RBP12.09□□□□□ -0.47
IRF3-227ENST00000600911 ATP11AUNQ6ZP68 121 aa12.08□□□□□ -0.48
IRF3-227ENST00000600911 SEC61BP60468 96 aaKnown RBP12.07□□□□□ -0.48
IRF3-227ENST00000600911 MUC2Q02817 5179 aa12.06□□□□□ -0.48
IRF3-227ENST00000600911 OCR1Q9BZK8 76 aa12.03□□□□□ -0.48
IRF3-227ENST00000600911 TP53AIP1Q9HCN2 124 aa11.97□□□□□ -0.49
IRF3-227ENST00000600911 SCGB1A1P11684 91 aa11.97□□□□□ -0.49
IRF3-227ENST00000600911 UQCRQO14949 82 aa11.91□□□□□ -0.5
IRF3-227ENST00000600911 TRAV22A0A0B4J277 110 aa11.88□□□□□ -0.51
IRF3-227ENST00000600911 ATOX1O00244 68 aa11.86□□□□□ -0.51
IRF3-227ENST00000600911 H0Y9P7 68 aa11.85□□□□□ -0.51
IRF3-227ENST00000600911 SPINK7P58062 85 aa11.85□□□□□ -0.51
IRF3-227ENST00000600911 IGKV2D-30A0A075B6S6 120 aa11.82□□□□□ -0.52
IRF3-227ENST00000600911 IGKV2-30P06310 120 aa11.82□□□□□ -0.52
IRF3-227ENST00000600911 TRAV7A0A075B6U4 112 aa11.82□□□□□ -0.52
IRF3-227ENST00000600911 HRES1P13985 223 aa11.77□□□□□ -0.53
IRF3-227ENST00000600911 SMIM20Q8N5G0 67 aa11.76□□□□□ -0.53
IRF3-227ENST00000600911 C5orf47Q569G3 176 aa11.75□□□□□ -0.53
IRF3-227ENST00000600911 C7orf65Q6ZTY9 151 aa11.75□□□□□ -0.53
IRF3-227ENST00000600911 LINC00208Q96KT6 92 aa11.75□□□□□ -0.53
IRF3-227ENST00000600911 SERP2Q8N6R1 65 aa11.72□□□□□ -0.53
IRF3-227ENST00000600911 C1orf64Q8NEQ6 169 aa11.71□□□□□ -0.53
IRF3-227ENST00000600911 CYP4F30PQ9H0H9 118 aa11.71□□□□□ -0.53
IRF3-227ENST00000600911 KRTAP19-2Q3LHN2 52 aa11.7□□□□□ -0.54
IRF3-227ENST00000600911 MP68P56378 58 aa11.69□□□□□ -0.54
IRF3-227ENST00000600911 LOC101927531A0A1B0GV80 90 aa11.68□□□□□ -0.54
IRF3-227ENST00000600911 MPLKIPQ8TAP9 179 aa11.68□□□□□ -0.54
IRF3-227ENST00000600911 KLKP1Q107X0 134 aa11.64□□□□□ -0.55
IRF3-227ENST00000600911 FAT4Q6V0I7 4981 aa11.64□□□□□ -0.55
IRF3-227ENST00000600911 A0A0U1RQV1 116 aa11.64□□□□□ -0.55
IRF3-227ENST00000600911 ANAPC13Q9BS18 74 aa11.62□□□□□ -0.55
IRF3-227ENST00000600911 COX7CP15954 63 aa11.61□□□□□ -0.55
IRF3-227ENST00000600911 SNURFQ9Y675 71 aa11.61□□□□□ -0.55
IRF3-227ENST00000600911 H3BPC8 53 aa11.6□□□□□ -0.55
IRF3-227ENST00000600911 C20orf197Q8N268 126 aa11.6□□□□□ -0.55
IRF3-227ENST00000600911 C4orf26Q17RF5 130 aa11.58□□□□□ -0.56
IRF3-227ENST00000600911 LCE2CQ5TA81 110 aa11.58□□□□□ -0.56
IRF3-227ENST00000600911 CYSTM1Q9H1C7 97 aa11.52□□□□□ -0.57
IRF3-227ENST00000600911 KRTAP3-1Q9BYR8 98 aa11.5□□□□□ -0.57
IRF3-227ENST00000600911 CCDC179H3BU77 68 aa11.49□□□□□ -0.57
IRF3-227ENST00000600911 FLGP20930 4061 aaPredicted RBP11.47□□□□□ -0.57
IRF3-227ENST00000600911 RBM12B-AS1Q9P1G2 102 aa11.47□□□□□ -0.57
IRF3-227ENST00000600911 COX6B2Q6YFQ2 88 aa11.45□□□□□ -0.58
IRF3-227ENST00000600911 FAM236DA0A1B0GTK5 79 aa11.42□□□□□ -0.58
IRF3-227ENST00000600911 FAM236CP0DP71 79 aa11.42□□□□□ -0.58
IRF3-227ENST00000600911 MT1HP80294 61 aa11.33□□□□□ -0.6
IRF3-227ENST00000600911 H7BZZ5 65 aa11.31□□□□□ -0.6
IRF3-227ENST00000600911 H1FX-AS1Q4G0G2 97 aa11.29□□□□□ -0.6
IRF3-227ENST00000600911 LCE2AQ5TA79 106 aaPredicted RBP11.24□□□□□ -0.61
IRF3-227ENST00000600911 DMAC1Q96GE9 116 aa11.23□□□□□ -0.61
IRF3-227ENST00000600911 NDUFC1O43677 76 aa11.19□□□□□ -0.62
IRF3-227ENST00000600911 SPANXA2-OT1Q8N9U9 137 aa11.19□□□□□ -0.62
IRF3-227ENST00000600911 PCP4P48539 62 aa11.18□□□□□ -0.62
IRF3-227ENST00000600911 A8MUN3 132 aa11.15□□□□□ -0.62
IRF3-227ENST00000600911 LCA10Q71F78 164 aa11.13□□□□□ -0.63
IRF3-227ENST00000600911 KRTAP3-3Q9BYR6 98 aa11.12□□□□□ -0.63
IRF3-227ENST00000600911 S4R3F8 94 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms