RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 LPAP08519 4548 aa11.41□□□□□ -0.58
IRF3-221ENST00000598808 IGLV7-46A0A075B6I9 117 aa11.41□□□□□ -0.58
IRF3-221ENST00000598808 A0A087WVE0 104 aa11.4□□□□□ -0.58
IRF3-221ENST00000598808 J3KT08 172 aa11.38□□□□□ -0.59
IRF3-221ENST00000598808 FP248Q71RG6 208 aaPredicted RBP11.37□□□□□ -0.59
IRF3-221ENST00000598808 IGKV4-1P06312 121 aa11.36□□□□□ -0.59
IRF3-221ENST00000598808 SMIM20Q8N5G0 67 aa11.35□□□□□ -0.59
IRF3-221ENST00000598808 LINC00472Q9H8W2 130 aa11.34□□□□□ -0.59
IRF3-221ENST00000598808 DSCR10P59022 87 aa11.32□□□□□ -0.6
IRF3-221ENST00000598808 SERP2Q8N6R1 65 aa11.27□□□□□ -0.6
IRF3-221ENST00000598808 A8MWP4 228 aa11.26□□□□□ -0.61
IRF3-221ENST00000598808 TPRXLQ17RH7 258 aa11.26□□□□□ -0.61
IRF3-221ENST00000598808 Q5XG85 94 aa11.26□□□□□ -0.61
IRF3-221ENST00000598808 Q8N9L7 120 aa11.26□□□□□ -0.61
IRF3-221ENST00000598808 ASB16-AS1Q495Z4 193 aa11.25□□□□□ -0.61
IRF3-221ENST00000598808 K7EQZ3 153 aa11.25□□□□□ -0.61
IRF3-221ENST00000598808 UQCRQO14949 82 aa11.25□□□□□ -0.61
IRF3-221ENST00000598808 COX7CP15954 63 aa11.25□□□□□ -0.61
IRF3-221ENST00000598808 NDUFB1O75438 58 aa11.23□□□□□ -0.61
IRF3-221ENST00000598808 C1orf195Q5TG92 126 aa11.23□□□□□ -0.61
IRF3-221ENST00000598808 RNF213Q63HN8 5207 aa11.23□□□□□ -0.61
IRF3-221ENST00000598808 TRAV7A0A075B6U4 112 aa11.22□□□□□ -0.61
IRF3-221ENST00000598808 PRR15Q8IV56 129 aa11.22□□□□□ -0.61
IRF3-221ENST00000598808 Q96NJ1 140 aa11.21□□□□□ -0.61
IRF3-221ENST00000598808 HCG22E2RYF7 251 aa11.19□□□□□ -0.62
IRF3-221ENST00000598808 DEFB116Q30KQ4 102 aa11.19□□□□□ -0.62
IRF3-221ENST00000598808 KRTAP13-3Q3SY46 172 aa11.19□□□□□ -0.62
IRF3-221ENST00000598808 C9orf92A6NGG3 77 aa11.15□□□□□ -0.62
IRF3-221ENST00000598808 CCDC179H3BU77 68 aa11.13□□□□□ -0.63
IRF3-221ENST00000598808 OCR1Q9BZK8 76 aa11.1□□□□□ -0.63
IRF3-221ENST00000598808 A0A1B0GVX0 72 aa11.09□□□□□ -0.63
IRF3-221ENST00000598808 CASC2Q6XLA1 102 aa11.08□□□□□ -0.64
IRF3-221ENST00000598808 MMP24-AS1A0A0U1RRL7 71 aa11.04□□□□□ -0.64
IRF3-221ENST00000598808 XP32Q5T750 250 aa11.04□□□□□ -0.64
IRF3-221ENST00000598808 WFDC13Q8IUB5 93 aa11.03□□□□□ -0.64
IRF3-221ENST00000598808 C8orf17Q9NRJ1 99 aa11.03□□□□□ -0.64
IRF3-221ENST00000598808 hDV103S1A0JD37 113 aa11.01□□□□□ -0.65
IRF3-221ENST00000598808 C8orf87E5RJ46 101 aa11.01□□□□□ -0.65
IRF3-221ENST00000598808 IGHV6-1A0A0B4J1U7 121 aa11□□□□□ -0.65
IRF3-221ENST00000598808 KLKP1Q107X0 134 aa10.98□□□□□ -0.65
IRF3-221ENST00000598808 C5orf47Q569G3 176 aa10.98□□□□□ -0.65
IRF3-221ENST00000598808 TMEM254Q8TBM7 123 aa10.97□□□□□ -0.65
IRF3-221ENST00000598808 MUC17Q685J3 4493 aa10.96□□□□□ -0.65
IRF3-221ENST00000598808 SEC61BP60468 96 aaKnown RBP10.96□□□□□ -0.65
IRF3-221ENST00000598808 C20orf197Q8N268 126 aa10.96□□□□□ -0.65
IRF3-221ENST00000598808 TP53AIP1Q9HCN2 124 aa10.95□□□□□ -0.66
IRF3-221ENST00000598808 MUC2Q02817 5179 aa10.94□□□□□ -0.66
IRF3-221ENST00000598808 NDUFC1O43677 76 aa10.93□□□□□ -0.66
IRF3-221ENST00000598808 LCE2DQ5TA82 110 aaPredicted RBP10.93□□□□□ -0.66
IRF3-221ENST00000598808 MRPL34Q9BQ48 92 aaKnown RBP10.92□□□□□ -0.66
IRF3-221ENST00000598808 H3BPC8 53 aa10.89□□□□□ -0.67
IRF3-221ENST00000598808 A0A0U1RQV1 116 aa10.88□□□□□ -0.67
IRF3-221ENST00000598808 KRTAP3-3Q9BYR6 98 aa10.88□□□□□ -0.67
IRF3-221ENST00000598808 KRTAP3-2Q9BYR7 98 aa10.88□□□□□ -0.67
IRF3-221ENST00000598808 MP68P56378 58 aa10.87□□□□□ -0.67
IRF3-221ENST00000598808 LINC00313P59037 77 aa10.87□□□□□ -0.67
IRF3-221ENST00000598808 TMEM258P61165 79 aa10.87□□□□□ -0.67
IRF3-221ENST00000598808 PCOTHQ58A44 107 aa10.85□□□□□ -0.67
IRF3-221ENST00000598808 RPL37P61927 97 aaKnown RBP10.84□□□□□ -0.67
IRF3-221ENST00000598808 NOTCH2NLQ7Z3S9 236 aa10.82□□□□□ -0.68
IRF3-221ENST00000598808 SNURFQ9Y675 71 aa10.82□□□□□ -0.68
IRF3-221ENST00000598808 TRAV22A0A0B4J277 110 aa10.81□□□□□ -0.68
IRF3-221ENST00000598808 CYSTM1Q9H1C7 97 aa10.8□□□□□ -0.68
IRF3-221ENST00000598808 H7BZZ5 65 aa10.79□□□□□ -0.68
IRF3-221ENST00000598808 ZCCHC13Q8WW36 166 aaKnown RBP10.79□□□□□ -0.68
IRF3-221ENST00000598808 H0Y9P7 68 aa10.78□□□□□ -0.68
IRF3-221ENST00000598808 NDUFS5O43920 106 aa10.78□□□□□ -0.68
IRF3-221ENST00000598808 Q8N9P0 234 aaPredicted RBP10.77□□□□□ -0.69
IRF3-221ENST00000598808 Q75L30 129 aa10.75□□□□□ -0.69
IRF3-221ENST00000598808 ATP11AUNQ6ZP68 121 aa10.74□□□□□ -0.69
IRF3-221ENST00000598808 ATP5EP56381 51 aaPredicted RBP10.74□□□□□ -0.69
IRF3-221ENST00000598808 KRTAP16-1A8MUX0 517 aa10.72□□□□□ -0.69
IRF3-221ENST00000598808 FAT4Q6V0I7 4981 aa10.71□□□□□ -0.69
IRF3-221ENST00000598808 LINC00208Q96KT6 92 aa10.71□□□□□ -0.69
IRF3-221ENST00000598808 KRTAP4-1Q9BYQ7 146 aa10.71□□□□□ -0.69
IRF3-221ENST00000598808 C20orf166-AS1Q96NR2 134 aa10.7□□□□□ -0.7
IRF3-221ENST00000598808 A8MUU9 505 aa10.68□□□□□ -0.7
IRF3-221ENST00000598808 C1orf64Q8NEQ6 169 aa10.68□□□□□ -0.7
IRF3-221ENST00000598808 FAM236DA0A1B0GTK5 79 aa10.68□□□□□ -0.7
IRF3-221ENST00000598808 FAM236CP0DP71 79 aa10.68□□□□□ -0.7
IRF3-221ENST00000598808 LOC101927531A0A1B0GV80 90 aa10.63□□□□□ -0.71
IRF3-221ENST00000598808 RPS28P62857 69 aaKnown RBP10.61□□□□□ -0.71
IRF3-221ENST00000598808 SPANXA2-OT1Q8N9U9 137 aa10.59□□□□□ -0.71
IRF3-221ENST00000598808 LCE2AQ5TA79 106 aaPredicted RBP10.55□□□□□ -0.72
IRF3-221ENST00000598808 Q5W150 140 aa10.55□□□□□ -0.72
IRF3-221ENST00000598808 SERP1Q9Y6X1 66 aa10.52□□□□□ -0.73
IRF3-221ENST00000598808 CYP4F30PQ9H0H9 118 aa10.5□□□□□ -0.73
IRF3-221ENST00000598808 IGKV2-30P06310 120 aa10.46□□□□□ -0.74
IRF3-221ENST00000598808 COX6B2Q6YFQ2 88 aa10.44□□□□□ -0.74
IRF3-221ENST00000598808 C7orf65Q6ZTY9 151 aa10.35□□□□□ -0.75
IRF3-221ENST00000598808 KRTAP19-2Q3LHN2 52 aa10.33□□□□□ -0.76
IRF3-221ENST00000598808 IGKV2D-30A0A075B6S6 120 aa10.31□□□□□ -0.76
IRF3-221ENST00000598808 LCE2CQ5TA81 110 aa10.3□□□□□ -0.76
IRF3-221ENST00000598808 SPINK7P58062 85 aa10.3□□□□□ -0.76
IRF3-221ENST00000598808 HRES1P13985 223 aa10.29□□□□□ -0.76
IRF3-221ENST00000598808 SMIM26A0A096LP01 95 aa10.27□□□□□ -0.77
IRF3-221ENST00000598808 RBM12B-AS1Q9P1G2 102 aa10.26□□□□□ -0.77
IRF3-221ENST00000598808 DMAC1Q96GE9 116 aa10.23□□□□□ -0.77
IRF3-221ENST00000598808 MT1HP80294 61 aa10.22□□□□□ -0.77
IRF3-221ENST00000598808 M0R2T5 61 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms