RNA–Protein interactions for RNA: ENST00000595437.5

FARP1-214, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene FARP1, Length 4,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-214ENST00000595437 ZFHX4Q86UP3 3567 aa8.79□□□□□ -1
FARP1-214ENST00000595437 PDZD2O15018 2839 aa8.79□□□□□ -1
FARP1-214ENST00000595437 TENM4Q6N022 2769 aa8.78□□□□□ -1
FARP1-214ENST00000595437 DCHS1Q96JQ0 3298 aa8.77□□□□□ -1
FARP1-214ENST00000595437 NOTCH2NLQ7Z3S9 236 aa8.77□□□□□ -1.01
FARP1-214ENST00000595437 SPINK7P58062 85 aa8.76□□□□□ -1.01
FARP1-214ENST00000595437 ASPMQ8IZT6 3477 aa8.76□□□□□ -1.01
FARP1-214ENST00000595437 LCA10Q71F78 164 aa8.75□□□□□ -1.01
FARP1-214ENST00000595437 A0A1B0GU33 70 aa8.74□□□□□ -1.01
FARP1-214ENST00000595437 Q6ZSA8 131 aa8.73□□□□□ -1.01
FARP1-214ENST00000595437 Q5VSD8 79 aa8.71□□□□□ -1.01
FARP1-214ENST00000595437 COX6B2Q6YFQ2 88 aa8.71□□□□□ -1.01
FARP1-214ENST00000595437 KRTAP13-2Q52LG2 175 aa8.71□□□□□ -1.02
FARP1-214ENST00000595437 TENM3Q9P273 2699 aa8.63□□□□□ -1.03
FARP1-214ENST00000595437 CRIPTQ9P021 101 aa8.63□□□□□ -1.03
FARP1-214ENST00000595437 SMG1Q96Q15 3661 aaKnown RBP8.62□□□□□ -1.03
FARP1-214ENST00000595437 CELSR1Q9NYQ6 3014 aa8.61□□□□□ -1.03
FARP1-214ENST00000595437 S4R3F8 94 aa8.6□□□□□ -1.03
FARP1-214ENST00000595437 A0A0D9SG42 100 aa8.59□□□□□ -1.03
FARP1-214ENST00000595437 TENM1Q9UKZ4 2725 aa8.57□□□□□ -1.04
FARP1-214ENST00000595437 CSAG1Q6PB30 78 aa8.57□□□□□ -1.04
FARP1-214ENST00000595437 SPINT4Q6UDR6 99 aa8.53□□□□□ -1.04
FARP1-214ENST00000595437 OTOGQ6ZRI0 2925 aa8.52□□□□□ -1.05
FARP1-214ENST00000595437 SEC61BP60468 96 aaKnown RBP8.5□□□□□ -1.05
FARP1-214ENST00000595437 CSMD1Q96PZ7 3565 aa8.49□□□□□ -1.05
FARP1-214ENST00000595437 BSNQ9UPA5 3926 aa8.46□□□□□ -1.05
FARP1-214ENST00000595437 LINC01554Q52M75 96 aa8.46□□□□□ -1.05
FARP1-214ENST00000595437 KRTAP1-4P0C5Y4 121 aa8.46□□□□□ -1.06
FARP1-214ENST00000595437 H1FX-AS1Q4G0G2 97 aa8.46□□□□□ -1.06
FARP1-214ENST00000595437 DMBT1Q9UGM3 2413 aaPredicted RBP8.45□□□□□ -1.06
FARP1-214ENST00000595437 VWFP04275 2813 aa8.45□□□□□ -1.06
FARP1-214ENST00000595437 SPATA8Q6RVD6 105 aa8.44□□□□□ -1.06
FARP1-214ENST00000595437 A8MUU9 505 aa8.4□□□□□ -1.07
FARP1-214ENST00000595437 C20orf166-AS1Q96NR2 134 aa8.38□□□□□ -1.07
FARP1-214ENST00000595437 ANK3Q12955 4377 aaKnown RBP8.38□□□□□ -1.07
FARP1-214ENST00000595437 SPENQ96T58 3664 aaKnown RBP8.38□□□□□ -1.07
FARP1-214ENST00000595437 RPL37P61927 97 aaKnown RBP8.37□□□□□ -1.07
FARP1-214ENST00000595437 PRAC1Q96KF2 57 aa8.36□□□□□ -1.07
FARP1-214ENST00000595437 NBPF19A0A087WUL8 3843 aa8.33□□□□□ -1.08
FARP1-214ENST00000595437 SVEP1Q4LDE5 3571 aa8.31□□□□□ -1.08
FARP1-214ENST00000595437 R4GN34 69 aa8.29□□□□□ -1.08
FARP1-214ENST00000595437 A6NN06 94 aa8.29□□□□□ -1.08
FARP1-214ENST00000595437 CAMK2N1Q7Z7J9 78 aa8.26□□□□□ -1.09
FARP1-214ENST00000595437 KRTAP16-1A8MUX0 517 aa8.26□□□□□ -1.09
FARP1-214ENST00000595437 ROMO1P60602 79 aa8.25□□□□□ -1.09
FARP1-214ENST00000595437 FBN1P35555 2871 aaKnown RBP8.22□□□□□ -1.09
FARP1-214ENST00000595437 ADM2Q7Z4H4 148 aa8.21□□□□□ -1.09
FARP1-214ENST00000595437 A8MU10 97 aa8.17□□□□□ -1.1
FARP1-214ENST00000595437 TENM2Q9NT68 2774 aa8.17□□□□□ -1.1
FARP1-214ENST00000595437 M0QZ58 72 aa8.17□□□□□ -1.1
FARP1-214ENST00000595437 TGP01266 2768 aa8.14□□□□□ -1.11
FARP1-214ENST00000595437 KRTAP13-3Q3SY46 172 aa8.14□□□□□ -1.11
FARP1-214ENST00000595437 M0R2T5 61 aa8.14□□□□□ -1.11
FARP1-214ENST00000595437 FLG2Q5D862 2391 aaPredicted RBP8.13□□□□□ -1.11
FARP1-214ENST00000595437 CSMD2Q7Z408 3487 aa8.11□□□□□ -1.11
FARP1-214ENST00000595437 A0A1B0GVY2 172 aa8.07□□□□□ -1.12
FARP1-214ENST00000595437 XP32Q5T750 250 aa8.07□□□□□ -1.12
FARP1-214ENST00000595437 PKD1L1Q8TDX9 2849 aa8.06□□□□□ -1.12
FARP1-214ENST00000595437 ZFHX3Q15911 3703 aa8.02□□□□□ -1.13
FARP1-214ENST00000595437 TRRAPQ9Y4A5 3859 aa8□□□□□ -1.13
FARP1-214ENST00000595437 LUZP6Q538Z0 58 aa7.99□□□□□ -1.13
FARP1-214ENST00000595437 KRTAP25-1Q3LHN0 102 aa7.97□□□□□ -1.13
FARP1-214ENST00000595437 TPRXLQ17RH7 258 aa7.97□□□□□ -1.13
FARP1-214ENST00000595437 H3BS24 57 aa7.96□□□□□ -1.14
FARP1-214ENST00000595437 KRTAP10-8P60410 259 aa7.95□□□□□ -1.14
FARP1-214ENST00000595437 CUBNO60494 3623 aa7.87□□□□□ -1.15
FARP1-214ENST00000595437 H0YAA0 97 aa7.86□□□□□ -1.15
FARP1-214ENST00000595437 PLAC4Q8WY50 150 aa7.82□□□□□ -1.16
FARP1-214ENST00000595437 VPS13CQ709C8 3753 aa7.8□□□□□ -1.16
FARP1-214ENST00000595437 MEGF8Q7Z7M0 2845 aa7.79□□□□□ -1.16
FARP1-214ENST00000595437 HUWE1Q7Z6Z7 4374 aaKnown RBP7.77□□□□□ -1.17
FARP1-214ENST00000595437 FBN3Q75N90 2809 aa7.76□□□□□ -1.17
FARP1-214ENST00000595437 ZNF469Q96JG9 3925 aaPredicted RBP7.72□□□□□ -1.17
FARP1-214ENST00000595437 AKAP9Q99996 3911 aa7.66□□□□□ -1.18
FARP1-214ENST00000595437 SRRM2Q9UQ35 2752 aaKnown RBP7.64□□□□□ -1.19
FARP1-214ENST00000595437 P0C880 135 aa7.63□□□□□ -1.19
FARP1-214ENST00000595437 KRTAP3-1Q9BYR8 98 aa7.61□□□□□ -1.19
FARP1-214ENST00000595437 TNP1P09430 55 aa7.57□□□□□ -1.2
FARP1-214ENST00000595437 A0A0A0MQY5 61 aa7.53□□□□□ -1.2
FARP1-214ENST00000595437 PP632Q6XCG6 107 aa7.53□□□□□ -1.2
FARP1-214ENST00000595437 KRTAP10-4P60372 401 aaPredicted RBP7.51□□□□□ -1.21
FARP1-214ENST00000595437 DNAH9Q9NYC9 4486 aa7.5□□□□□ -1.21
FARP1-214ENST00000595437 C10orf95Q9H7T3 257 aa7.46□□□□□ -1.22
FARP1-214ENST00000595437 MT1HL1P0DM35 61 aa7.41□□□□□ -1.22
FARP1-214ENST00000595437 ALMS1Q8TCU4 4167 aa7.39□□□□□ -1.23
FARP1-214ENST00000595437 COL7A1Q02388 2944 aa7.38□□□□□ -1.23
FARP1-214ENST00000595437 NDUFAF8A1L188 74 aa7.35□□□□□ -1.23
FARP1-214ENST00000595437 KRTAP10-6P60371 365 aaPredicted RBP7.34□□□□□ -1.23
FARP1-214ENST00000595437 KRTAP12-2P59991 146 aa7.34□□□□□ -1.23
FARP1-214ENST00000595437 KRTAP12-1P59990 96 aa7.31□□□□□ -1.24
FARP1-214ENST00000595437 PLECQ15149 4684 aaKnown RBP7.29□□□□□ -1.24
FARP1-214ENST00000595437 DNAH1Q9P2D7 4330 aa7.27□□□□□ -1.25
FARP1-214ENST00000595437 KRTAP10-10P60014 251 aa7.26□□□□□ -1.25
FARP1-214ENST00000595437 VPS13DQ5THJ4 4388 aa7.25□□□□□ -1.25
FARP1-214ENST00000595437 KRTAP13-4Q3LI77 160 aa7.24□□□□□ -1.25
FARP1-214ENST00000595437 KRTAP3-3Q9BYR6 98 aa7.22□□□□□ -1.25
FARP1-214ENST00000595437 DNAH17Q9UFH2 4485 aa7.19□□□□□ -1.26
FARP1-214ENST00000595437 KRTAP3-2Q9BYR7 98 aa7.17□□□□□ -1.26
FARP1-214ENST00000595437 DNAH5Q8TE73 4624 aa7.13□□□□□ -1.27
FARP1-214ENST00000595437 CSMD3Q7Z407 3707 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms