RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 HERC2O95714 4834 aa8.71□□□□□ -1.01
VRK3-207ENST00000594092 LIMD2Q9BT23 127 aa8.71□□□□□ -1.01
VRK3-207ENST00000594092 COX7CP15954 63 aa8.7□□□□□ -1.02
VRK3-207ENST00000594092 MYCBP2O75592 4640 aa8.7□□□□□ -1.02
VRK3-207ENST00000594092 HCG22E2RYF7 251 aa8.69□□□□□ -1.02
VRK3-207ENST00000594092 RPS29P62273 56 aaKnown RBP8.68□□□□□ -1.02
VRK3-207ENST00000594092 SMIM20Q8N5G0 67 aa8.68□□□□□ -1.02
VRK3-207ENST00000594092 SERP2Q8N6R1 65 aa8.66□□□□□ -1.02
VRK3-207ENST00000594092 C1orf195Q5TG92 126 aa8.66□□□□□ -1.02
VRK3-207ENST00000594092 A0A1B0GVX0 72 aa8.64□□□□□ -1.03
VRK3-207ENST00000594092 MT1HL1P0DM35 61 aa8.64□□□□□ -1.03
VRK3-207ENST00000594092 WFDC13Q8IUB5 93 aa8.64□□□□□ -1.03
VRK3-207ENST00000594092 ABCA13Q86UQ4 5058 aa8.63□□□□□ -1.03
VRK3-207ENST00000594092 TRAV7A0A075B6U4 112 aa8.63□□□□□ -1.03
VRK3-207ENST00000594092 IGHV6-1A0A0B4J1U7 121 aa8.62□□□□□ -1.03
VRK3-207ENST00000594092 OXTP01178 125 aa8.62□□□□□ -1.03
VRK3-207ENST00000594092 CASC2Q6XLA1 102 aa8.62□□□□□ -1.03
VRK3-207ENST00000594092 MMP24-AS1A0A0U1RRL7 71 aa8.61□□□□□ -1.03
VRK3-207ENST00000594092 KRTAP29-1A8MX34 341 aaPredicted RBP8.59□□□□□ -1.03
VRK3-207ENST00000594092 C8orf17Q9NRJ1 99 aa8.59□□□□□ -1.03
VRK3-207ENST00000594092 OCR1Q9BZK8 76 aa8.58□□□□□ -1.04
VRK3-207ENST00000594092 hDV103S1A0JD37 113 aa8.57□□□□□ -1.04
VRK3-207ENST00000594092 DMBT1Q9UGM3 2413 aaPredicted RBP8.56□□□□□ -1.04
VRK3-207ENST00000594092 TMEM258P61165 79 aa8.55□□□□□ -1.04
VRK3-207ENST00000594092 RPS28P62857 69 aaKnown RBP8.55□□□□□ -1.04
VRK3-207ENST00000594092 C8orf87E5RJ46 101 aa8.54□□□□□ -1.04
VRK3-207ENST00000594092 RETNLBQ9BQ08 111 aa8.52□□□□□ -1.04
VRK3-207ENST00000594092 NOTCH2NLQ7Z3S9 236 aa8.52□□□□□ -1.05
VRK3-207ENST00000594092 TMEM254Q8TBM7 123 aa8.51□□□□□ -1.05
VRK3-207ENST00000594092 LINC00313P59037 77 aa8.5□□□□□ -1.05
VRK3-207ENST00000594092 C20orf197Q8N268 126 aa8.5□□□□□ -1.05
VRK3-207ENST00000594092 MRPL34Q9BQ48 92 aaKnown RBP8.5□□□□□ -1.05
VRK3-207ENST00000594092 NDUFS5O43920 106 aa8.45□□□□□ -1.06
VRK3-207ENST00000594092 C5orf47Q569G3 176 aa8.45□□□□□ -1.06
VRK3-207ENST00000594092 TP53AIP1Q9HCN2 124 aa8.45□□□□□ -1.06
VRK3-207ENST00000594092 J3QL48 77 aa8.43□□□□□ -1.06
VRK3-207ENST00000594092 KLKP1Q107X0 134 aa8.43□□□□□ -1.06
VRK3-207ENST00000594092 SNURFQ9Y675 71 aa8.42□□□□□ -1.06
VRK3-207ENST00000594092 A0A0U1RQV1 116 aa8.4□□□□□ -1.06
VRK3-207ENST00000594092 MP68P56378 58 aa8.4□□□□□ -1.06
VRK3-207ENST00000594092 FP248Q71RG6 208 aaPredicted RBP8.4□□□□□ -1.06
VRK3-207ENST00000594092 CYSTM1Q9H1C7 97 aa8.4□□□□□ -1.07
VRK3-207ENST00000594092 TRAV22A0A0B4J277 110 aa8.38□□□□□ -1.07
VRK3-207ENST00000594092 KRTAP16-1A8MUX0 517 aa8.38□□□□□ -1.07
VRK3-207ENST00000594092 H0Y9P7 68 aa8.38□□□□□ -1.07
VRK3-207ENST00000594092 PCLOQ9Y6V0 5065 aa8.37□□□□□ -1.07
VRK3-207ENST00000594092 C9orf92A6NGG3 77 aa8.36□□□□□ -1.07
VRK3-207ENST00000594092 Q8N9P0 234 aaPredicted RBP8.36□□□□□ -1.07
VRK3-207ENST00000594092 NDUFC1O43677 76 aa8.36□□□□□ -1.07
VRK3-207ENST00000594092 IGLV7-46A0A075B6I9 117 aa8.35□□□□□ -1.07
VRK3-207ENST00000594092 H3BPC8 53 aa8.35□□□□□ -1.07
VRK3-207ENST00000594092 LINC00208Q96KT6 92 aa8.33□□□□□ -1.08
VRK3-207ENST00000594092 FAM236DA0A1B0GTK5 79 aa8.33□□□□□ -1.08
VRK3-207ENST00000594092 FAM236CP0DP71 79 aa8.33□□□□□ -1.08
VRK3-207ENST00000594092 PRR4Q16378 134 aa8.33□□□□□ -1.08
VRK3-207ENST00000594092 ZCCHC13Q8WW36 166 aaKnown RBP8.32□□□□□ -1.08
VRK3-207ENST00000594092 H7BZZ5 65 aa8.31□□□□□ -1.08
VRK3-207ENST00000594092 ATP5EP56381 51 aaPredicted RBP8.31□□□□□ -1.08
VRK3-207ENST00000594092 C1orf64Q8NEQ6 169 aa8.31□□□□□ -1.08
VRK3-207ENST00000594092 SERP1Q9Y6X1 66 aa8.29□□□□□ -1.08
VRK3-207ENST00000594092 KRTAP13-3Q3SY46 172 aa8.28□□□□□ -1.08
VRK3-207ENST00000594092 Q5W150 140 aa8.26□□□□□ -1.09
VRK3-207ENST00000594092 C20orf166-AS1Q96NR2 134 aa8.25□□□□□ -1.09
VRK3-207ENST00000594092 A8MUU9 505 aa8.24□□□□□ -1.09
VRK3-207ENST00000594092 LOC101927531A0A1B0GV80 90 aa8.22□□□□□ -1.09
VRK3-207ENST00000594092 TPRXLQ17RH7 258 aa8.22□□□□□ -1.09
VRK3-207ENST00000594092 XP32Q5T750 250 aa8.2□□□□□ -1.1
VRK3-207ENST00000594092 Q75L30 129 aa8.19□□□□□ -1.1
VRK3-207ENST00000594092 SMIM26A0A096LP01 95 aa8.17□□□□□ -1.1
VRK3-207ENST00000594092 HERC1Q15751 4861 aa8.16□□□□□ -1.1
VRK3-207ENST00000594092 PCOTHQ58A44 107 aa8.15□□□□□ -1.1
VRK3-207ENST00000594092 LPAP08519 4548 aa8.15□□□□□ -1.1
VRK3-207ENST00000594092 IGKV2-30P06310 120 aa8.14□□□□□ -1.11
VRK3-207ENST00000594092 CYP4F30PQ9H0H9 118 aa8.14□□□□□ -1.11
VRK3-207ENST00000594092 RPL37P61927 97 aaKnown RBP8.13□□□□□ -1.11
VRK3-207ENST00000594092 SPANXA2-OT1Q8N9U9 137 aa8.12□□□□□ -1.11
VRK3-207ENST00000594092 C4orf26Q17RF5 130 aa8.11□□□□□ -1.11
VRK3-207ENST00000594092 IGKV2D-30A0A075B6S6 120 aa8.09□□□□□ -1.11
VRK3-207ENST00000594092 LRP2P98164 4655 aa8.08□□□□□ -1.12
VRK3-207ENST00000594092 ATP11AUNQ6ZP68 121 aa8.07□□□□□ -1.12
VRK3-207ENST00000594092 C7orf65Q6ZTY9 151 aa8.06□□□□□ -1.12
VRK3-207ENST00000594092 HMCN2Q8NDA2 5059 aa8.05□□□□□ -1.12
VRK3-207ENST00000594092 HRES1P13985 223 aa8.02□□□□□ -1.13
VRK3-207ENST00000594092 SPINK7P58062 85 aa7.96□□□□□ -1.13
VRK3-207ENST00000594092 PRO0628Q9UI54 55 aa7.96□□□□□ -1.14
VRK3-207ENST00000594092 SEC61BP60468 96 aaKnown RBP7.92□□□□□ -1.14
VRK3-207ENST00000594092 DMAC1Q96GE9 116 aa7.91□□□□□ -1.14
VRK3-207ENST00000594092 ACYP2P14621 99 aa7.89□□□□□ -1.15
VRK3-207ENST00000594092 MUC17Q685J3 4493 aa7.89□□□□□ -1.15
VRK3-207ENST00000594092 COA5Q86WW8 74 aa7.87□□□□□ -1.15
VRK3-207ENST00000594092 MPLKIPQ8TAP9 179 aa7.86□□□□□ -1.15
VRK3-207ENST00000594092 Q1T7F1 81 aa7.85□□□□□ -1.15
VRK3-207ENST00000594092 V9GYY9 64 aa7.85□□□□□ -1.15
VRK3-207ENST00000594092 A8MUN3 132 aa7.82□□□□□ -1.16
VRK3-207ENST00000594092 BRK1Q8WUW1 75 aa7.8□□□□□ -1.16
VRK3-207ENST00000594092 KRTAP4-1Q9BYQ7 146 aa7.8□□□□□ -1.16
VRK3-207ENST00000594092 CHKB-CPT1BH3BT56 60 aa7.78□□□□□ -1.16
VRK3-207ENST00000594092 COX6B2Q6YFQ2 88 aa7.77□□□□□ -1.17
VRK3-207ENST00000594092 KRTAP3-1Q9BYR8 98 aa7.73□□□□□ -1.17
VRK3-207ENST00000594092 UBR4Q5T4S7 5183 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms