RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 TNRC18O15417 2968 aaPredicted RBP7.31□□□□□ -1.24
DNMT1-228ENST00000592705 SPATA8Q6RVD6 105 aa7.3□□□□□ -1.24
DNMT1-228ENST00000592705 USP34Q70CQ2 3546 aa7.3□□□□□ -1.24
DNMT1-228ENST00000592705 PLAC4Q8WY50 150 aa7.29□□□□□ -1.24
DNMT1-228ENST00000592705 RPL37P61927 97 aaKnown RBP7.27□□□□□ -1.25
DNMT1-228ENST00000592705 RPS29P62273 56 aaKnown RBP7.26□□□□□ -1.25
DNMT1-228ENST00000592705 A6NN06 94 aa7.25□□□□□ -1.25
DNMT1-228ENST00000592705 ROMO1P60602 79 aa7.24□□□□□ -1.25
DNMT1-228ENST00000592705 LUZP6Q538Z0 58 aa7.24□□□□□ -1.25
DNMT1-228ENST00000592705 DMXL2Q8TDJ6 3036 aa7.23□□□□□ -1.25
DNMT1-228ENST00000592705 TENM3Q9P273 2699 aa7.2□□□□□ -1.26
DNMT1-228ENST00000592705 ZZEF1O43149 2961 aa7.19□□□□□ -1.26
DNMT1-228ENST00000592705 SPEGQ15772 3267 aa7.18□□□□□ -1.26
DNMT1-228ENST00000592705 KRTAP13-2Q52LG2 175 aa7.18□□□□□ -1.26
DNMT1-228ENST00000592705 M0QZ58 72 aa7.15□□□□□ -1.27
DNMT1-228ENST00000592705 HRNRQ86YZ3 2850 aaPredicted RBP7.14□□□□□ -1.27
DNMT1-228ENST00000592705 TENM2Q9NT68 2774 aa7.12□□□□□ -1.27
DNMT1-228ENST00000592705 EYSQ5T1H1 3165 aa7.11□□□□□ -1.27
DNMT1-228ENST00000592705 MYO15AQ9UKN7 3530 aa7.11□□□□□ -1.27
DNMT1-228ENST00000592705 A8MU10 97 aa7.11□□□□□ -1.27
DNMT1-228ENST00000592705 C20orf166-AS1Q96NR2 134 aa7.11□□□□□ -1.27
DNMT1-228ENST00000592705 TENM1Q9UKZ4 2725 aa7.08□□□□□ -1.28
DNMT1-228ENST00000592705 ADM2Q7Z4H4 148 aa7.08□□□□□ -1.28
DNMT1-228ENST00000592705 CELSR2Q9HCU4 2923 aa7.07□□□□□ -1.28
DNMT1-228ENST00000592705 ASH1LQ9NR48 2969 aaKnown RBP7.07□□□□□ -1.28
DNMT1-228ENST00000592705 ZANQ9Y493 2812 aa7.04□□□□□ -1.28
DNMT1-228ENST00000592705 KRTAP25-1Q3LHN0 102 aa7.04□□□□□ -1.28
DNMT1-228ENST00000592705 DCHS2Q6V1P9 2916 aa7.03□□□□□ -1.28
DNMT1-228ENST00000592705 DMXL1Q9Y485 3027 aa7.02□□□□□ -1.29
DNMT1-228ENST00000592705 CFAP47Q6ZTR5 3102 aa7.01□□□□□ -1.29
DNMT1-228ENST00000592705 WDFY3Q8IZQ1 3526 aa7.01□□□□□ -1.29
DNMT1-228ENST00000592705 NF1P21359 2839 aa7□□□□□ -1.29
DNMT1-228ENST00000592705 LOC400499M0QZD8 3231 aa6.99□□□□□ -1.29
DNMT1-228ENST00000592705 A8MUU9 505 aa6.96□□□□□ -1.29
DNMT1-228ENST00000592705 A0A0A0MQY5 61 aa6.93□□□□□ -1.3
DNMT1-228ENST00000592705 PKD1L1Q8TDX9 2849 aa6.9□□□□□ -1.31
DNMT1-228ENST00000592705 MXRA5Q9NR99 2828 aa6.89□□□□□ -1.31
DNMT1-228ENST00000592705 KRTAP1-4P0C5Y4 121 aa6.89□□□□□ -1.31
DNMT1-228ENST00000592705 TPRXLQ17RH7 258 aa6.88□□□□□ -1.31
DNMT1-228ENST00000592705 FBN2P35556 2912 aa6.87□□□□□ -1.31
DNMT1-228ENST00000592705 KRTAP16-1A8MUX0 517 aa6.81□□□□□ -1.32
DNMT1-228ENST00000592705 XP32Q5T750 250 aa6.81□□□□□ -1.32
DNMT1-228ENST00000592705 A0A1B0GVY2 172 aa6.79□□□□□ -1.32
DNMT1-228ENST00000592705 DMDP11532 3685 aa6.77□□□□□ -1.33
DNMT1-228ENST00000592705 KRTAP10-10P60014 251 aa6.73□□□□□ -1.33
DNMT1-228ENST00000592705 H0YAA0 97 aa6.72□□□□□ -1.33
DNMT1-228ENST00000592705 MUC3AQ02505 3323 aa6.71□□□□□ -1.33
DNMT1-228ENST00000592705 KRTAP13-3Q3SY46 172 aa6.71□□□□□ -1.34
DNMT1-228ENST00000592705 RELNP78509 3460 aa6.66□□□□□ -1.34
DNMT1-228ENST00000592705 ZFHX4Q86UP3 3567 aa6.66□□□□□ -1.34
DNMT1-228ENST00000592705 NDUFAF8A1L188 74 aa6.65□□□□□ -1.34
DNMT1-228ENST00000592705 VWFP04275 2813 aa6.65□□□□□ -1.34
DNMT1-228ENST00000592705 KRTAP10-8P60410 259 aa6.63□□□□□ -1.35
DNMT1-228ENST00000592705 SMG1Q96Q15 3661 aaKnown RBP6.63□□□□□ -1.35
DNMT1-228ENST00000592705 CELSR1Q9NYQ6 3014 aa6.61□□□□□ -1.35
DNMT1-228ENST00000592705 PRO2289Q9P1D8 64 aa6.6□□□□□ -1.35
DNMT1-228ENST00000592705 TNP1P09430 55 aa6.59□□□□□ -1.35
DNMT1-228ENST00000592705 PDZD2O15018 2839 aa6.59□□□□□ -1.35
DNMT1-228ENST00000592705 SPENQ96T58 3664 aaKnown RBP6.57□□□□□ -1.36
DNMT1-228ENST00000592705 DCHS1Q96JQ0 3298 aa6.56□□□□□ -1.36
DNMT1-228ENST00000592705 ASPMQ8IZT6 3477 aa6.55□□□□□ -1.36
DNMT1-228ENST00000592705 SRRM2Q9UQ35 2752 aaKnown RBP6.55□□□□□ -1.36
DNMT1-228ENST00000592705 C10orf95Q9H7T3 257 aa6.54□□□□□ -1.36
DNMT1-228ENST00000592705 TGP01266 2768 aa6.54□□□□□ -1.36
DNMT1-228ENST00000592705 LAMA5O15230 3695 aa6.52□□□□□ -1.37
DNMT1-228ENST00000592705 PP632Q6XCG6 107 aa6.52□□□□□ -1.37
DNMT1-228ENST00000592705 FBN3Q75N90 2809 aa6.52□□□□□ -1.37
DNMT1-228ENST00000592705 CSMD1Q96PZ7 3565 aa6.5□□□□□ -1.37
DNMT1-228ENST00000592705 BSNQ9UPA5 3926 aa6.49□□□□□ -1.37
DNMT1-228ENST00000592705 OTOGQ6ZRI0 2925 aa6.46□□□□□ -1.38
DNMT1-228ENST00000592705 P0C880 135 aa6.46□□□□□ -1.38
DNMT1-228ENST00000592705 ANK3Q12955 4377 aaKnown RBP6.37□□□□□ -1.39
DNMT1-228ENST00000592705 FBN1P35555 2871 aaKnown RBP6.36□□□□□ -1.39
DNMT1-228ENST00000592705 KRTAP3-1Q9BYR8 98 aa6.31□□□□□ -1.4
DNMT1-228ENST00000592705 SVEP1Q4LDE5 3571 aa6.3□□□□□ -1.4
DNMT1-228ENST00000592705 ZFHX3Q15911 3703 aa6.28□□□□□ -1.4
DNMT1-228ENST00000592705 NBPF19A0A087WUL8 3843 aa6.28□□□□□ -1.4
DNMT1-228ENST00000592705 KRTAP12-2P59991 146 aa6.27□□□□□ -1.41
DNMT1-228ENST00000592705 KRTAP12-1P59990 96 aa6.19□□□□□ -1.42
DNMT1-228ENST00000592705 MT1HL1P0DM35 61 aa6.12□□□□□ -1.43
DNMT1-228ENST00000592705 KRTAP10-6P60371 365 aaPredicted RBP6.12□□□□□ -1.43
DNMT1-228ENST00000592705 KRTAP13-4Q3LI77 160 aa6.11□□□□□ -1.43
DNMT1-228ENST00000592705 KRTAP4-5Q9BYR2 181 aa6.09□□□□□ -1.43
DNMT1-228ENST00000592705 VPS13CQ709C8 3753 aa6.05□□□□□ -1.44
DNMT1-228ENST00000592705 TRRAPQ9Y4A5 3859 aa6.05□□□□□ -1.44
DNMT1-228ENST00000592705 CSMD2Q7Z408 3487 aa6.02□□□□□ -1.45
DNMT1-228ENST00000592705 HUWE1Q7Z6Z7 4374 aaKnown RBP5.99□□□□□ -1.45
DNMT1-228ENST00000592705 COL7A1Q02388 2944 aa5.99□□□□□ -1.45
DNMT1-228ENST00000592705 MEGF8Q7Z7M0 2845 aa5.98□□□□□ -1.45
DNMT1-228ENST00000592705 CUBNO60494 3623 aa5.97□□□□□ -1.45
DNMT1-228ENST00000592705 AKAP9Q99996 3911 aa5.96□□□□□ -1.46
DNMT1-228ENST00000592705 KRTAP3-2Q9BYR7 98 aa5.94□□□□□ -1.46
DNMT1-228ENST00000592705 KRTAP3-3Q9BYR6 98 aa5.93□□□□□ -1.46
DNMT1-228ENST00000592705 KRTAP10-4P60372 401 aaPredicted RBP5.89□□□□□ -1.47
DNMT1-228ENST00000592705 KRTAP15-1Q3LI76 137 aa5.81□□□□□ -1.48
DNMT1-228ENST00000592705 ZNF469Q96JG9 3925 aaPredicted RBP5.76□□□□□ -1.49
DNMT1-228ENST00000592705 ALMS1Q8TCU4 4167 aa5.74□□□□□ -1.49
DNMT1-228ENST00000592705 DNAH9Q9NYC9 4486 aa5.69□□□□□ -1.5
DNMT1-228ENST00000592705 DNAH1Q9P2D7 4330 aa5.61□□□□□ -1.51
DNMT1-228ENST00000592705 DNHD1Q96M86 4753 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms