RNA–Protein interactions for RNA: ENST00000592013.1

TNFRSF11A-204, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 2

Gene TNFRSF11A, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-204ENST00000592013 MTURNQ8N3F0 131 aa10□□□□□ -0.81
TNFRSF11A-204ENST00000592013 VPS25Q9BRG1 176 aa9.99□□□□□ -0.81
TNFRSF11A-204ENST00000592013 PYY3Q5JQD4 70 aa9.98□□□□□ -0.81
TNFRSF11A-204ENST00000592013 DEFB116Q30KQ4 102 aa9.96□□□□□ -0.82
TNFRSF11A-204ENST00000592013 A0A1B0GVX0 72 aa9.95□□□□□ -0.82
TNFRSF11A-204ENST00000592013 C9JAW5 83 aa9.94□□□□□ -0.82
TNFRSF11A-204ENST00000592013 KRTAP4-8Q9BYQ9 185 aa9.94□□□□□ -0.82
TNFRSF11A-204ENST00000592013 NDUFB1O75438 58 aa9.93□□□□□ -0.82
TNFRSF11A-204ENST00000592013 KRTAP9-8Q9BYQ0 159 aa9.92□□□□□ -0.82
TNFRSF11A-204ENST00000592013 A0A1B0GW54 56 aa9.9□□□□□ -0.82
TNFRSF11A-204ENST00000592013 NOTCH2NLQ7Z3S9 236 aa9.9□□□□□ -0.82
TNFRSF11A-204ENST00000592013 BAALC-AS2P0C853 105 aa9.88□□□□□ -0.83
TNFRSF11A-204ENST00000592013 MPLKIPQ8TAP9 179 aa9.88□□□□□ -0.83
TNFRSF11A-204ENST00000592013 HRES1P13985 223 aa9.87□□□□□ -0.83
TNFRSF11A-204ENST00000592013 JMJD7-PLA2G4BH0Y9G9 81 aa9.86□□□□□ -0.83
TNFRSF11A-204ENST00000592013 PDE6GP18545 87 aa9.85□□□□□ -0.83
TNFRSF11A-204ENST00000592013 ZCCHC13Q8WW36 166 aaKnown RBP9.85□□□□□ -0.83
TNFRSF11A-204ENST00000592013 Q6ZQT0 140 aa9.84□□□□□ -0.83
TNFRSF11A-204ENST00000592013 M0R143 59 aa9.82□□□□□ -0.84
TNFRSF11A-204ENST00000592013 ATXN8Q156A1 80 aa9.82□□□□□ -0.84
TNFRSF11A-204ENST00000592013 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF11A-204ENST00000592013 LYRM7Q5U5X0 104 aa9.81□□□□□ -0.84
TNFRSF11A-204ENST00000592013 SPINK7P58062 85 aa9.79□□□□□ -0.84
TNFRSF11A-204ENST00000592013 MT2AP02795 61 aa9.77□□□□□ -0.85
TNFRSF11A-204ENST00000592013 Q8N9P0 234 aaPredicted RBP9.77□□□□□ -0.85
TNFRSF11A-204ENST00000592013 TMA7Q9Y2S6 64 aaKnown RBP9.77□□□□□ -0.85
TNFRSF11A-204ENST00000592013 LOC110117498A0A087WWA1 95 aa9.76□□□□□ -0.85
TNFRSF11A-204ENST00000592013 A8MWP4 228 aa9.76□□□□□ -0.85
TNFRSF11A-204ENST00000592013 KRTAP10-10P60014 251 aa9.75□□□□□ -0.85
TNFRSF11A-204ENST00000592013 C8orf17Q9NRJ1 99 aa9.72□□□□□ -0.85
TNFRSF11A-204ENST00000592013 USH2AO75445 5202 aa9.68□□□□□ -0.86
TNFRSF11A-204ENST00000592013 MT1FP04733 61 aa9.67□□□□□ -0.86
TNFRSF11A-204ENST00000592013 NREPQ16612 68 aa9.67□□□□□ -0.86
TNFRSF11A-204ENST00000592013 Q6ZVQ6 151 aa9.67□□□□□ -0.86
TNFRSF11A-204ENST00000592013 LINC00846Q9NV44 126 aa9.67□□□□□ -0.86
TNFRSF11A-204ENST00000592013 WFDC13Q8IUB5 93 aa9.66□□□□□ -0.86
TNFRSF11A-204ENST00000592013 IGKV3D-7A0A0C4DH55 119 aa9.65□□□□□ -0.86
TNFRSF11A-204ENST00000592013 PRR15Q8IV56 129 aa9.64□□□□□ -0.87
TNFRSF11A-204ENST00000592013 C14orf132Q9NPU4 83 aa9.63□□□□□ -0.87
TNFRSF11A-204ENST00000592013 KRTAP9-7A8MTY7 169 aa9.62□□□□□ -0.87
TNFRSF11A-204ENST00000592013 SSPOA2VEC9 5147 aa9.62□□□□□ -0.87
TNFRSF11A-204ENST00000592013 KRTAP9-3Q9BYQ3 159 aa9.61□□□□□ -0.87
TNFRSF11A-204ENST00000592013 TMEM254Q8TBM7 123 aa9.6□□□□□ -0.87
TNFRSF11A-204ENST00000592013 MRPL34Q9BQ48 92 aaKnown RBP9.59□□□□□ -0.87
TNFRSF11A-204ENST00000592013 NAA38Q9BRA0 125 aaKnown RBP9.59□□□□□ -0.87
TNFRSF11A-204ENST00000592013 SMIM6P0DI80 62 aa9.56□□□□□ -0.88
TNFRSF11A-204ENST00000592013 hDV103S1A0JD37 113 aa9.54□□□□□ -0.88
TNFRSF11A-204ENST00000592013 TSTD3H0UI37 97 aa9.53□□□□□ -0.88
TNFRSF11A-204ENST00000592013 NDUFS5O43920 106 aa9.53□□□□□ -0.88
TNFRSF11A-204ENST00000592013 H3BT86 120 aa9.52□□□□□ -0.89
TNFRSF11A-204ENST00000592013 KRTAP19-1Q8IUB9 90 aa9.52□□□□□ -0.89
TNFRSF11A-204ENST00000592013 MMP24-AS1A0A0U1RRL7 71 aa9.51□□□□□ -0.89
TNFRSF11A-204ENST00000592013 H1FX-AS1Q4G0G2 97 aa9.49□□□□□ -0.89
TNFRSF11A-204ENST00000592013 BPY2O14599 106 aa9.48□□□□□ -0.89
TNFRSF11A-204ENST00000592013 BATFQ16520 125 aa9.47□□□□□ -0.89
TNFRSF11A-204ENST00000592013 FCGBPQ9Y6R7 5405 aaPredicted RBP9.47□□□□□ -0.89
TNFRSF11A-204ENST00000592013 KRTAP4-12Q9BQ66 201 aa9.46□□□□□ -0.9
TNFRSF11A-204ENST00000592013 K7EQZ3 153 aa9.45□□□□□ -0.9
TNFRSF11A-204ENST00000592013 C7orf65Q6ZTY9 151 aa9.44□□□□□ -0.9
TNFRSF11A-204ENST00000592013 C9orf118A6NHY6 69 aa9.42□□□□□ -0.9
TNFRSF11A-204ENST00000592013 LCE3BQ5TA77 95 aa9.4□□□□□ -0.9
TNFRSF11A-204ENST00000592013 IGKV2D-30A0A075B6S6 120 aa9.39□□□□□ -0.91
TNFRSF11A-204ENST00000592013 IGKV2-30P06310 120 aa9.39□□□□□ -0.91
TNFRSF11A-204ENST00000592013 A0A1W2PPM0 123 aa9.38□□□□□ -0.91
TNFRSF11A-204ENST00000592013 MACF1Q9UPN3 7388 aaKnown RBP9.36□□□□□ -0.91
TNFRSF11A-204ENST00000592013 KRTAP19-6Q3LI70 58 aa9.36□□□□□ -0.91
TNFRSF11A-204ENST00000592013 CASC2Q6XLA1 102 aa9.36□□□□□ -0.91
TNFRSF11A-204ENST00000592013 CXCL6P80162 114 aa9.34□□□□□ -0.91
TNFRSF11A-204ENST00000592013 KRTAP9-9Q9BYP9 154 aa9.31□□□□□ -0.92
TNFRSF11A-204ENST00000592013 KRTAP9-4Q9BYQ2 154 aa9.31□□□□□ -0.92
TNFRSF11A-204ENST00000592013 HCG22E2RYF7 251 aa9.3□□□□□ -0.92
TNFRSF11A-204ENST00000592013 TAX1BP3O14907 124 aa9.3□□□□□ -0.92
TNFRSF11A-204ENST00000592013 Q5W150 140 aa9.28□□□□□ -0.92
TNFRSF11A-204ENST00000592013 UBL5Q9BZL1 73 aa9.28□□□□□ -0.92
TNFRSF11A-204ENST00000592013 SPCS1Q9Y6A9 102 aa9.25□□□□□ -0.93
TNFRSF11A-204ENST00000592013 SYNE2Q8WXH0 6885 aaKnown RBP9.24□□□□□ -0.93
TNFRSF11A-204ENST00000592013 Q8N9L7 120 aa9.24□□□□□ -0.93
TNFRSF11A-204ENST00000592013 C4orf26Q17RF5 130 aa9.22□□□□□ -0.93
TNFRSF11A-204ENST00000592013 KRTAP4-8A0A0G2JLE6 195 aa9.16□□□□□ -0.94
TNFRSF11A-204ENST00000592013 TP53AIP1Q9HCN2 124 aa9.15□□□□□ -0.94
TNFRSF11A-204ENST00000592013 FAM236AA0A1B0GUQ0 79 aa9.14□□□□□ -0.95
TNFRSF11A-204ENST00000592013 FAM236BA0A1B0GV22 79 aa9.14□□□□□ -0.95
TNFRSF11A-204ENST00000592013 COL5A1-AS1Q5SY13 56 aa9.12□□□□□ -0.95
TNFRSF11A-204ENST00000592013 CSAG1Q6PB30 78 aa9.12□□□□□ -0.95
TNFRSF11A-204ENST00000592013 C5orf47Q569G3 176 aa9.11□□□□□ -0.95
TNFRSF11A-204ENST00000592013 S4R3F8 94 aa9.11□□□□□ -0.95
TNFRSF11A-204ENST00000592013 C1orf64Q8NEQ6 169 aa9.08□□□□□ -0.96
TNFRSF11A-204ENST00000592013 LOC105371267A0A1B0GV96 52 aa9.05□□□□□ -0.96
TNFRSF11A-204ENST00000592013 K7EP34 96 aa9.04□□□□□ -0.96
TNFRSF11A-204ENST00000592013 KRTAP6-3Q3LI67 103 aa9.03□□□□□ -0.96
TNFRSF11A-204ENST00000592013 PRO0461Q9UI25 63 aa9.02□□□□□ -0.97
TNFRSF11A-204ENST00000592013 GTF2H5Q6ZYL4 71 aa9.01□□□□□ -0.97
TNFRSF11A-204ENST00000592013 Q5VV11 94 aa8.99□□□□□ -0.97
TNFRSF11A-204ENST00000592013 LCA10Q71F78 164 aa8.97□□□□□ -0.97
TNFRSF11A-204ENST00000592013 KRTAP3-1Q9BYR8 98 aa8.97□□□□□ -0.97
TNFRSF11A-204ENST00000592013 A6NN06 94 aa8.95□□□□□ -0.98
TNFRSF11A-204ENST00000592013 F8W1H4 67 aa8.95□□□□□ -0.98
TNFRSF11A-204ENST00000592013 SPRR2GQ9BYE4 73 aa8.92□□□□□ -0.98
TNFRSF11A-204ENST00000592013 KLKP1Q107X0 134 aa8.89□□□□□ -0.99
TNFRSF11A-204ENST00000592013 LOC101927531A0A1B0GV80 90 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms