RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 C9orf118A6NHY6 69 aa9.25□□□□□ -0.93
CIRBP-227ENST00000590188 JMJD7-PLA2G4BH0Y9G9 81 aa9.25□□□□□ -0.93
CIRBP-227ENST00000590188 LORP23490 312 aaPredicted RBP9.25□□□□□ -0.93
CIRBP-227ENST00000590188 COL5A1-AS1Q5SY13 56 aa9.25□□□□□ -0.93
CIRBP-227ENST00000590188 LYRM7Q5U5X0 104 aa9.25□□□□□ -0.93
CIRBP-227ENST00000590188 Q6ZQT0 140 aa9.25□□□□□ -0.93
CIRBP-227ENST00000590188 C14orf132Q9NPU4 83 aa9.24□□□□□ -0.93
CIRBP-227ENST00000590188 KRTAP9-6A0A140TA67 174 aa9.23□□□□□ -0.93
CIRBP-227ENST00000590188 TRBV20-1A0A075B6N2 111 aa9.22□□□□□ -0.93
CIRBP-227ENST00000590188 C8orf87E5RJ46 101 aa9.22□□□□□ -0.93
CIRBP-227ENST00000590188 LOC110117498A0A087WWA1 95 aa9.21□□□□□ -0.94
CIRBP-227ENST00000590188 C21orf62-AS1Q17RA5 79 aa9.21□□□□□ -0.94
CIRBP-227ENST00000590188 A0A1W2PPM0 123 aa9.2□□□□□ -0.94
CIRBP-227ENST00000590188 J3KT08 172 aa9.2□□□□□ -0.94
CIRBP-227ENST00000590188 MTURNQ8N3F0 131 aa9.18□□□□□ -0.94
CIRBP-227ENST00000590188 NDUFB1O75438 58 aa9.15□□□□□ -0.94
CIRBP-227ENST00000590188 PDE6GP18545 87 aa9.15□□□□□ -0.94
CIRBP-227ENST00000590188 SPCS1Q9Y6A9 102 aa9.14□□□□□ -0.95
CIRBP-227ENST00000590188 FAM236DA0A1B0GTK5 79 aa9.13□□□□□ -0.95
CIRBP-227ENST00000590188 FAM236CP0DP71 79 aa9.13□□□□□ -0.95
CIRBP-227ENST00000590188 FSIP2Q5CZC0 6907 aa9.12□□□□□ -0.95
CIRBP-227ENST00000590188 A0A1B0GW54 56 aa9.11□□□□□ -0.95
CIRBP-227ENST00000590188 A8MWP4 228 aa9.11□□□□□ -0.95
CIRBP-227ENST00000590188 C8orf17Q9NRJ1 99 aa9.11□□□□□ -0.95
CIRBP-227ENST00000590188 IGKV3D-7A0A0C4DH55 119 aa9.1□□□□□ -0.95
CIRBP-227ENST00000590188 HRES1P13985 223 aa9.1□□□□□ -0.95
CIRBP-227ENST00000590188 NREPQ16612 68 aa9.1□□□□□ -0.95
CIRBP-227ENST00000590188 H3BT86 120 aa9.09□□□□□ -0.95
CIRBP-227ENST00000590188 ZCCHC13Q8WW36 166 aaKnown RBP9.09□□□□□ -0.95
CIRBP-227ENST00000590188 RBM12B-AS1Q9P1G2 102 aa9.06□□□□□ -0.96
CIRBP-227ENST00000590188 K7EP34 96 aa9.05□□□□□ -0.96
CIRBP-227ENST00000590188 Q8N9P0 234 aaPredicted RBP9.04□□□□□ -0.96
CIRBP-227ENST00000590188 CRCT1Q9UGL9 99 aa9.04□□□□□ -0.96
CIRBP-227ENST00000590188 PRR15Q8IV56 129 aa9.03□□□□□ -0.96
CIRBP-227ENST00000590188 MPLKIPQ8TAP9 179 aa9.03□□□□□ -0.96
CIRBP-227ENST00000590188 Q6ZVQ6 151 aa9.02□□□□□ -0.97
CIRBP-227ENST00000590188 SPINK7P58062 85 aa9□□□□□ -0.97
CIRBP-227ENST00000590188 GTF2H5Q6ZYL4 71 aa9□□□□□ -0.97
CIRBP-227ENST00000590188 MMP24-AS1A0A0U1RRL7 71 aa8.98□□□□□ -0.97
CIRBP-227ENST00000590188 K7EQZ3 153 aa8.98□□□□□ -0.97
CIRBP-227ENST00000590188 SMCPP49901 116 aaPredicted RBP8.95□□□□□ -0.98
CIRBP-227ENST00000590188 MRPL34Q9BQ48 92 aaKnown RBP8.95□□□□□ -0.98
CIRBP-227ENST00000590188 KRTAP9-8Q9BYQ0 159 aa8.95□□□□□ -0.98
CIRBP-227ENST00000590188 A0A1B0GV90 55 aa8.94□□□□□ -0.98
CIRBP-227ENST00000590188 TMEM254Q8TBM7 123 aa8.94□□□□□ -0.98
CIRBP-227ENST00000590188 BPY2O14599 106 aa8.93□□□□□ -0.98
CIRBP-227ENST00000590188 hDV103S1A0JD37 113 aa8.92□□□□□ -0.98
CIRBP-227ENST00000590188 NDUFS5O43920 106 aa8.92□□□□□ -0.98
CIRBP-227ENST00000590188 PRO0461Q9UI25 63 aa8.91□□□□□ -0.98
CIRBP-227ENST00000590188 WFDC13Q8IUB5 93 aa8.9□□□□□ -0.98
CIRBP-227ENST00000590188 Q8N9L7 120 aa8.9□□□□□ -0.98
CIRBP-227ENST00000590188 MT2AP02795 61 aa8.86□□□□□ -0.99
CIRBP-227ENST00000590188 F8W1H4 67 aa8.84□□□□□ -0.99
CIRBP-227ENST00000590188 ETDBQ3ZM63 59 aa8.81□□□□□ -1
CIRBP-227ENST00000590188 LINC00846Q9NV44 126 aa8.81□□□□□ -1
CIRBP-227ENST00000590188 USH2AO75445 5202 aa8.8□□□□□ -1
CIRBP-227ENST00000590188 MT1FP04733 61 aa8.8□□□□□ -1
CIRBP-227ENST00000590188 CASC2Q6XLA1 102 aa8.8□□□□□ -1
CIRBP-227ENST00000590188 IGKV2D-30A0A075B6S6 120 aa8.78□□□□□ -1
CIRBP-227ENST00000590188 HCG22E2RYF7 251 aa8.78□□□□□ -1
CIRBP-227ENST00000590188 IGKV2-30P06310 120 aa8.78□□□□□ -1
CIRBP-227ENST00000590188 Q5W150 140 aa8.78□□□□□ -1
CIRBP-227ENST00000590188 UBL5Q9BZL1 73 aa8.78□□□□□ -1
CIRBP-227ENST00000590188 KRTAP10-10P60014 251 aa8.76□□□□□ -1.01
CIRBP-227ENST00000590188 SSPOA2VEC9 5147 aa8.72□□□□□ -1.01
CIRBP-227ENST00000590188 C7orf65Q6ZTY9 151 aa8.71□□□□□ -1.02
CIRBP-227ENST00000590188 KRTAP9-3Q9BYQ3 159 aa8.67□□□□□ -1.02
CIRBP-227ENST00000590188 H1FX-AS1Q4G0G2 97 aa8.66□□□□□ -1.02
CIRBP-227ENST00000590188 LCE2BO14633 110 aa8.65□□□□□ -1.02
CIRBP-227ENST00000590188 CXCL6P80162 114 aa8.65□□□□□ -1.02
CIRBP-227ENST00000590188 C4orf26Q17RF5 130 aa8.61□□□□□ -1.03
CIRBP-227ENST00000590188 ACYP1P07311 99 aa8.5□□□□□ -1.05
CIRBP-227ENST00000590188 FAM240AA0A1B0GVK7 77 aa8.49□□□□□ -1.05
CIRBP-227ENST00000590188 KRTAP19-1Q8IUB9 90 aa8.49□□□□□ -1.05
CIRBP-227ENST00000590188 TP53AIP1Q9HCN2 124 aa8.48□□□□□ -1.05
CIRBP-227ENST00000590188 J3QR89 54 aa8.47□□□□□ -1.05
CIRBP-227ENST00000590188 FCGBPQ9Y6R7 5405 aaPredicted RBP8.47□□□□□ -1.05
CIRBP-227ENST00000590188 KRTAP3-1Q9BYR8 98 aa8.46□□□□□ -1.06
CIRBP-227ENST00000590188 C5orf47Q569G3 176 aa8.44□□□□□ -1.06
CIRBP-227ENST00000590188 C1orf64Q8NEQ6 169 aa8.44□□□□□ -1.06
CIRBP-227ENST00000590188 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.42□□□□□ -1.06
CIRBP-227ENST00000590188 S4R3F8 94 aa8.4□□□□□ -1.06
CIRBP-227ENST00000590188 HIST1H4AP62805 103 aaKnown RBP8.39□□□□□ -1.07
CIRBP-227ENST00000590188 K7ERU9 68 aa8.36□□□□□ -1.07
CIRBP-227ENST00000590188 ATP5EP2Q5VTU8 51 aa8.36□□□□□ -1.07
CIRBP-227ENST00000590188 LCA10Q71F78 164 aa8.35□□□□□ -1.07
CIRBP-227ENST00000590188 LINC00643Q86TS7 51 aa8.35□□□□□ -1.07
CIRBP-227ENST00000590188 TRAV22A0A0B4J277 110 aa8.34□□□□□ -1.07
CIRBP-227ENST00000590188 CYP4F30PQ9H0H9 118 aa8.34□□□□□ -1.07
CIRBP-227ENST00000590188 FAM236AA0A1B0GUQ0 79 aa8.32□□□□□ -1.08
CIRBP-227ENST00000590188 FAM236BA0A1B0GV22 79 aa8.32□□□□□ -1.08
CIRBP-227ENST00000590188 KRTAP9-7A8MTY7 169 aa8.31□□□□□ -1.08
CIRBP-227ENST00000590188 A0A087WVE0 104 aa8.3□□□□□ -1.08
CIRBP-227ENST00000590188 CSAG1Q6PB30 78 aa8.3□□□□□ -1.08
CIRBP-227ENST00000590188 KRTAP19-6Q3LI70 58 aa8.29□□□□□ -1.08
CIRBP-227ENST00000590188 LOC101927531A0A1B0GV80 90 aa8.28□□□□□ -1.08
CIRBP-227ENST00000590188 H0Y9P7 68 aa8.25□□□□□ -1.09
CIRBP-227ENST00000590188 UQCRQO14949 82 aa8.24□□□□□ -1.09
CIRBP-227ENST00000590188 MACF1Q9UPN3 7388 aaKnown RBP8.21□□□□□ -1.09
CIRBP-227ENST00000590188 KRTAP3-3Q9BYR6 98 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms