RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 CRCT1Q9UGL9 99 aa10.51□□□□□ -0.73
CIRBP-226ENST00000590171 TRBV20-1A0A075B6N2 111 aa10.49□□□□□ -0.73
CIRBP-226ENST00000590171 C9JAW5 83 aa10.48□□□□□ -0.73
CIRBP-226ENST00000590171 A0A1B0GVX0 72 aa10.46□□□□□ -0.73
CIRBP-226ENST00000590171 JMJD7-PLA2G4BH0Y9G9 81 aa10.46□□□□□ -0.73
CIRBP-226ENST00000590171 C8orf87E5RJ46 101 aa10.44□□□□□ -0.74
CIRBP-226ENST00000590171 C9orf118A6NHY6 69 aa10.43□□□□□ -0.74
CIRBP-226ENST00000590171 C21orf62-AS1Q17RA5 79 aa10.43□□□□□ -0.74
CIRBP-226ENST00000590171 Q6ZQT0 140 aa10.43□□□□□ -0.74
CIRBP-226ENST00000590171 TAX1BP3O14907 124 aa10.41□□□□□ -0.74
CIRBP-226ENST00000590171 J3KT08 172 aa10.4□□□□□ -0.74
CIRBP-226ENST00000590171 A0A1W2PPM0 123 aa10.39□□□□□ -0.75
CIRBP-226ENST00000590171 LOC110117498A0A087WWA1 95 aa10.38□□□□□ -0.75
CIRBP-226ENST00000590171 HRES1P13985 223 aa10.37□□□□□ -0.75
CIRBP-226ENST00000590171 C14orf132Q9NPU4 83 aa10.37□□□□□ -0.75
CIRBP-226ENST00000590171 PDE6GP18545 87 aa10.36□□□□□ -0.75
CIRBP-226ENST00000590171 MPLKIPQ8TAP9 179 aa10.36□□□□□ -0.75
CIRBP-226ENST00000590171 FAM236DA0A1B0GTK5 79 aa10.34□□□□□ -0.75
CIRBP-226ENST00000590171 FAM236CP0DP71 79 aa10.34□□□□□ -0.75
CIRBP-226ENST00000590171 H3BT86 120 aa10.33□□□□□ -0.76
CIRBP-226ENST00000590171 A0A1B0GW54 56 aa10.32□□□□□ -0.76
CIRBP-226ENST00000590171 MTURNQ8N3F0 131 aa10.32□□□□□ -0.76
CIRBP-226ENST00000590171 NDUFB1O75438 58 aa10.31□□□□□ -0.76
CIRBP-226ENST00000590171 KRTAP9-8Q9BYQ0 159 aa10.31□□□□□ -0.76
CIRBP-226ENST00000590171 RBM12B-AS1Q9P1G2 102 aa10.31□□□□□ -0.76
CIRBP-226ENST00000590171 ZCCHC13Q8WW36 166 aaKnown RBP10.3□□□□□ -0.76
CIRBP-226ENST00000590171 A8MWP4 228 aa10.29□□□□□ -0.76
CIRBP-226ENST00000590171 Q8N9P0 234 aaPredicted RBP10.27□□□□□ -0.77
CIRBP-226ENST00000590171 C8orf17Q9NRJ1 99 aa10.27□□□□□ -0.77
CIRBP-226ENST00000590171 SPCS1Q9Y6A9 102 aa10.27□□□□□ -0.77
CIRBP-226ENST00000590171 IGKV3D-7A0A0C4DH55 119 aa10.26□□□□□ -0.77
CIRBP-226ENST00000590171 COL5A1-AS1Q5SY13 56 aa10.24□□□□□ -0.77
CIRBP-226ENST00000590171 SPINK7P58062 85 aa10.22□□□□□ -0.77
CIRBP-226ENST00000590171 NREPQ16612 68 aa10.2□□□□□ -0.78
CIRBP-226ENST00000590171 Q6ZVQ6 151 aa10.18□□□□□ -0.78
CIRBP-226ENST00000590171 PRR15Q8IV56 129 aa10.18□□□□□ -0.78
CIRBP-226ENST00000590171 MT2AP02795 61 aa10.17□□□□□ -0.78
CIRBP-226ENST00000590171 MMP24-AS1A0A0U1RRL7 71 aa10.13□□□□□ -0.79
CIRBP-226ENST00000590171 PCP4L1A6NKN8 68 aa10.12□□□□□ -0.79
CIRBP-226ENST00000590171 K7EP34 96 aa10.12□□□□□ -0.79
CIRBP-226ENST00000590171 SMCPP49901 116 aaPredicted RBP10.12□□□□□ -0.79
CIRBP-226ENST00000590171 USH2AO75445 5202 aa10.1□□□□□ -0.79
CIRBP-226ENST00000590171 K7EQZ3 153 aa10.1□□□□□ -0.79
CIRBP-226ENST00000590171 TMEM254Q8TBM7 123 aa10.1□□□□□ -0.79
CIRBP-226ENST00000590171 MRPL34Q9BQ48 92 aaKnown RBP10.1□□□□□ -0.79
CIRBP-226ENST00000590171 MT1FP04733 61 aa10.09□□□□□ -0.79
CIRBP-226ENST00000590171 WFDC13Q8IUB5 93 aa10.08□□□□□ -0.8
CIRBP-226ENST00000590171 PRO0461Q9UI25 63 aa10.07□□□□□ -0.8
CIRBP-226ENST00000590171 hDV103S1A0JD37 113 aa10.04□□□□□ -0.8
CIRBP-226ENST00000590171 BPY2O14599 106 aa10.03□□□□□ -0.8
CIRBP-226ENST00000590171 GTF2H5Q6ZYL4 71 aa10.02□□□□□ -0.81
CIRBP-226ENST00000590171 KRTAP10-10P60014 251 aa10.01□□□□□ -0.81
CIRBP-226ENST00000590171 SSPOA2VEC9 5147 aa10.01□□□□□ -0.81
CIRBP-226ENST00000590171 NDUFS5O43920 106 aa9.99□□□□□ -0.81
CIRBP-226ENST00000590171 KRTAP9-3Q9BYQ3 159 aa9.98□□□□□ -0.81
CIRBP-226ENST00000590171 LCE2BO14633 110 aa9.96□□□□□ -0.82
CIRBP-226ENST00000590171 Q8N9L7 120 aa9.95□□□□□ -0.82
CIRBP-226ENST00000590171 UBL5Q9BZL1 73 aa9.93□□□□□ -0.82
CIRBP-226ENST00000590171 LINC00846Q9NV44 126 aa9.93□□□□□ -0.82
CIRBP-226ENST00000590171 F8W1H4 67 aa9.92□□□□□ -0.82
CIRBP-226ENST00000590171 Q5W150 140 aa9.9□□□□□ -0.82
CIRBP-226ENST00000590171 CASC2Q6XLA1 102 aa9.89□□□□□ -0.83
CIRBP-226ENST00000590171 IGKV2D-30A0A075B6S6 120 aa9.87□□□□□ -0.83
CIRBP-226ENST00000590171 IGKV2-30P06310 120 aa9.87□□□□□ -0.83
CIRBP-226ENST00000590171 ETDBQ3ZM63 59 aa9.86□□□□□ -0.83
CIRBP-226ENST00000590171 HCG22E2RYF7 251 aa9.85□□□□□ -0.83
CIRBP-226ENST00000590171 H1FX-AS1Q4G0G2 97 aa9.84□□□□□ -0.83
CIRBP-226ENST00000590171 C7orf65Q6ZTY9 151 aa9.84□□□□□ -0.83
CIRBP-226ENST00000590171 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.8□□□□□ -0.84
CIRBP-226ENST00000590171 KRTAP19-1Q8IUB9 90 aa9.8□□□□□ -0.84
CIRBP-226ENST00000590171 FCGBPQ9Y6R7 5405 aaPredicted RBP9.78□□□□□ -0.84
CIRBP-226ENST00000590171 CXCL6P80162 114 aa9.76□□□□□ -0.85
CIRBP-226ENST00000590171 C4orf26Q17RF5 130 aa9.71□□□□□ -0.86
CIRBP-226ENST00000590171 KRTAP9-7A8MTY7 169 aa9.67□□□□□ -0.86
CIRBP-226ENST00000590171 ACYP1P07311 99 aa9.64□□□□□ -0.87
CIRBP-226ENST00000590171 FAM240AA0A1B0GVK7 77 aa9.6□□□□□ -0.87
CIRBP-226ENST00000590171 KRTAP19-6Q3LI70 58 aa9.6□□□□□ -0.87
CIRBP-226ENST00000590171 KRTAP3-1Q9BYR8 98 aa9.59□□□□□ -0.87
CIRBP-226ENST00000590171 TP53AIP1Q9HCN2 124 aa9.57□□□□□ -0.88
CIRBP-226ENST00000590171 A0A1B0GV90 55 aa9.56□□□□□ -0.88
CIRBP-226ENST00000590171 ATP5EP2Q5VTU8 51 aa9.54□□□□□ -0.88
CIRBP-226ENST00000590171 C5orf47Q569G3 176 aa9.53□□□□□ -0.88
CIRBP-226ENST00000590171 C1orf64Q8NEQ6 169 aa9.52□□□□□ -0.89
CIRBP-226ENST00000590171 MACF1Q9UPN3 7388 aaKnown RBP9.52□□□□□ -0.89
CIRBP-226ENST00000590171 S4R3F8 94 aa9.49□□□□□ -0.89
CIRBP-226ENST00000590171 HIST1H4AP62805 103 aaKnown RBP9.48□□□□□ -0.89
CIRBP-226ENST00000590171 SYNE2Q8WXH0 6885 aaKnown RBP9.45□□□□□ -0.9
CIRBP-226ENST00000590171 LCA10Q71F78 164 aa9.44□□□□□ -0.9
CIRBP-226ENST00000590171 CSAG1Q6PB30 78 aa9.41□□□□□ -0.9
CIRBP-226ENST00000590171 LINC00643Q86TS7 51 aa9.41□□□□□ -0.9
CIRBP-226ENST00000590171 TRAV22A0A0B4J277 110 aa9.4□□□□□ -0.9
CIRBP-226ENST00000590171 FAM236AA0A1B0GUQ0 79 aa9.4□□□□□ -0.9
CIRBP-226ENST00000590171 FAM236BA0A1B0GV22 79 aa9.4□□□□□ -0.9
CIRBP-226ENST00000590171 CYP4F30PQ9H0H9 118 aa9.4□□□□□ -0.9
CIRBP-226ENST00000590171 A0A087WVE0 104 aa9.36□□□□□ -0.91
CIRBP-226ENST00000590171 LOC101927531A0A1B0GV80 90 aa9.33□□□□□ -0.92
CIRBP-226ENST00000590171 KRTAP3-3Q9BYR6 98 aa9.32□□□□□ -0.92
CIRBP-226ENST00000590171 J3QR89 54 aa9.31□□□□□ -0.92
CIRBP-226ENST00000590171 UQCRQO14949 82 aa9.31□□□□□ -0.92
CIRBP-226ENST00000590171 H0Y9P7 68 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms