RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 LINC00208Q96KT6 92 aa8.95□□□□□ -0.98
MBD1-217ENST00000588937 DYNC1H1Q14204 4646 aaKnown RBP8.94□□□□□ -0.98
MBD1-217ENST00000588937 TRAV22A0A0B4J277 110 aa8.94□□□□□ -0.98
MBD1-217ENST00000588937 A0A087X002 238 aa8.93□□□□□ -0.98
MBD1-217ENST00000588937 KRTAP13-2Q52LG2 175 aa8.92□□□□□ -0.98
MBD1-217ENST00000588937 SPINK6Q6UWN8 80 aa8.92□□□□□ -0.98
MBD1-217ENST00000588937 MRPL34Q9BQ48 92 aaKnown RBP8.92□□□□□ -0.98
MBD1-217ENST00000588937 Q5XG85 94 aa8.91□□□□□ -0.98
MBD1-217ENST00000588937 SMIM26A0A096LP01 95 aa8.89□□□□□ -0.99
MBD1-217ENST00000588937 C1orf64Q8NEQ6 169 aa8.89□□□□□ -0.99
MBD1-217ENST00000588937 C8orf87E5RJ46 101 aa8.89□□□□□ -0.99
MBD1-217ENST00000588937 KRTAP1-4P0C5Y4 121 aa8.89□□□□□ -0.99
MBD1-217ENST00000588937 NDUFS5O43920 106 aa8.88□□□□□ -0.99
MBD1-217ENST00000588937 LIMD2Q9BT23 127 aa8.87□□□□□ -0.99
MBD1-217ENST00000588937 CYP4F30PQ9H0H9 118 aa8.86□□□□□ -0.99
MBD1-217ENST00000588937 SPANXA2-OT1Q8N9U9 137 aa8.85□□□□□ -0.99
MBD1-217ENST00000588937 APOBP04114 4563 aaKnown RBP8.84□□□□□ -0.99
MBD1-217ENST00000588937 PLA2G1BP04054 148 aaKnown RBP8.84□□□□□ -0.99
MBD1-217ENST00000588937 C4orf48Q5BLP8 95 aa8.84□□□□□ -1
MBD1-217ENST00000588937 NOTCH2NLQ7Z3S9 236 aa8.84□□□□□ -1
MBD1-217ENST00000588937 VPS13BQ7Z7G8 4022 aa8.82□□□□□ -1
MBD1-217ENST00000588937 TYMSOSQ8TAI1 123 aa8.81□□□□□ -1
MBD1-217ENST00000588937 C1orf195Q5TG92 126 aa8.81□□□□□ -1
MBD1-217ENST00000588937 LINC00313P59037 77 aa8.78□□□□□ -1
MBD1-217ENST00000588937 EPPK1P58107 5090 aaKnown RBP8.78□□□□□ -1
MBD1-217ENST00000588937 SPINK1P00995 79 aa8.78□□□□□ -1
MBD1-217ENST00000588937 FP248Q71RG6 208 aaPredicted RBP8.76□□□□□ -1.01
MBD1-217ENST00000588937 PRR4Q16378 134 aa8.76□□□□□ -1.01
MBD1-217ENST00000588937 C4orf26Q17RF5 130 aa8.75□□□□□ -1.01
MBD1-217ENST00000588937 IGLV7-46A0A075B6I9 117 aa8.73□□□□□ -1.01
MBD1-217ENST00000588937 SPAG11AQ6PDA7 123 aa8.73□□□□□ -1.01
MBD1-217ENST00000588937 LOC101927531A0A1B0GV80 90 aa8.72□□□□□ -1.01
MBD1-217ENST00000588937 RPS29P62273 56 aaKnown RBP8.72□□□□□ -1.01
MBD1-217ENST00000588937 SMR3BP02814 79 aaPredicted RBP8.71□□□□□ -1.01
MBD1-217ENST00000588937 PCOTHQ58A44 107 aa8.7□□□□□ -1.02
MBD1-217ENST00000588937 Q8N9P0 234 aaPredicted RBP8.7□□□□□ -1.02
MBD1-217ENST00000588937 LINC00304Q8N9R0 145 aa8.7□□□□□ -1.02
MBD1-217ENST00000588937 FAT1Q14517 4588 aa8.7□□□□□ -1.02
MBD1-217ENST00000588937 PRR26Q8N8Z3 221 aa8.68□□□□□ -1.02
MBD1-217ENST00000588937 FAM229AH3BQW9 127 aa8.68□□□□□ -1.02
MBD1-217ENST00000588937 KRTAP13-3Q3SY46 172 aa8.68□□□□□ -1.02
MBD1-217ENST00000588937 Q5W150 140 aa8.67□□□□□ -1.02
MBD1-217ENST00000588937 MPLKIPQ8TAP9 179 aa8.66□□□□□ -1.02
MBD1-217ENST00000588937 KRTAP10-4P60372 401 aaPredicted RBP8.64□□□□□ -1.03
MBD1-217ENST00000588937 HSPG2P98160 4391 aa8.64□□□□□ -1.03
MBD1-217ENST00000588937 KRTAP16-1A8MUX0 517 aa8.63□□□□□ -1.03
MBD1-217ENST00000588937 Q1T7F1 81 aa8.62□□□□□ -1.03
MBD1-217ENST00000588937 V9GYY9 64 aa8.61□□□□□ -1.03
MBD1-217ENST00000588937 BIRC6Q9NR09 4857 aa8.59□□□□□ -1.03
MBD1-217ENST00000588937 SVIPQ8NHG7 77 aa8.58□□□□□ -1.04
MBD1-217ENST00000588937 COA5Q86WW8 74 aa8.58□□□□□ -1.04
MBD1-217ENST00000588937 RYR1P21817 5038 aa8.57□□□□□ -1.04
MBD1-217ENST00000588937 PKHD1L1Q86WI1 4243 aa8.57□□□□□ -1.04
MBD1-217ENST00000588937 KIAA1109Q2LD37 5005 aa8.56□□□□□ -1.04
MBD1-217ENST00000588937 IGKV2-30P06310 120 aa8.54□□□□□ -1.04
MBD1-217ENST00000588937 RETNLBQ9BQ08 111 aa8.53□□□□□ -1.04
MBD1-217ENST00000588937 HRES1P13985 223 aa8.48□□□□□ -1.05
MBD1-217ENST00000588937 ACYP2P14621 99 aa8.48□□□□□ -1.05
MBD1-217ENST00000588937 Q5VSD8 79 aa8.46□□□□□ -1.05
MBD1-217ENST00000588937 DMAC1Q96GE9 116 aa8.44□□□□□ -1.06
MBD1-217ENST00000588937 IGKV2D-30A0A075B6S6 120 aa8.43□□□□□ -1.06
MBD1-217ENST00000588937 Q8N1X5 172 aa8.43□□□□□ -1.06
MBD1-217ENST00000588937 PSPHP1O15172 72 aa8.43□□□□□ -1.06
MBD1-217ENST00000588937 KRTAP17-1Q9BYP8 105 aa8.41□□□□□ -1.06
MBD1-217ENST00000588937 HERC2O95714 4834 aa8.4□□□□□ -1.07
MBD1-217ENST00000588937 PRO0628Q9UI54 55 aa8.4□□□□□ -1.07
MBD1-217ENST00000588937 C20orf166-AS1Q96NR2 134 aa8.39□□□□□ -1.07
MBD1-217ENST00000588937 A8MUN3 132 aa8.38□□□□□ -1.07
MBD1-217ENST00000588937 A8MUU9 505 aa8.38□□□□□ -1.07
MBD1-217ENST00000588937 C7orf65Q6ZTY9 151 aa8.38□□□□□ -1.07
MBD1-217ENST00000588937 BRK1Q8WUW1 75 aa8.38□□□□□ -1.07
MBD1-217ENST00000588937 C9orf92A6NGG3 77 aa8.38□□□□□ -1.07
MBD1-217ENST00000588937 CHKB-CPT1BH3BT56 60 aa8.36□□□□□ -1.07
MBD1-217ENST00000588937 PRR15LQ9BU68 103 aa8.36□□□□□ -1.07
MBD1-217ENST00000588937 LINC01558Q9Y6Z2 57 aa8.36□□□□□ -1.07
MBD1-217ENST00000588937 KRTAP10-8P60410 259 aa8.35□□□□□ -1.07
MBD1-217ENST00000588937 Q5VV11 94 aa8.35□□□□□ -1.07
MBD1-217ENST00000588937 FAT3Q8TDW7 4589 aa8.34□□□□□ -1.07
MBD1-217ENST00000588937 TNXBP22105 4242 aa8.33□□□□□ -1.08
MBD1-217ENST00000588937 LRP1Q07954 4544 aaKnown RBP8.32□□□□□ -1.08
MBD1-217ENST00000588937 Q75L30 129 aa8.3□□□□□ -1.08
MBD1-217ENST00000588937 KRTAP4-5Q9BYR2 181 aa8.26□□□□□ -1.09
MBD1-217ENST00000588937 ABCA13Q86UQ4 5058 aa8.24□□□□□ -1.09
MBD1-217ENST00000588937 FLG2Q5D862 2391 aaPredicted RBP8.24□□□□□ -1.09
MBD1-217ENST00000588937 MYCBP2O75592 4640 aa8.21□□□□□ -1.09
MBD1-217ENST00000588937 A6NED7 52 aa8.2□□□□□ -1.1
MBD1-217ENST00000588937 MT1HL1P0DM35 61 aa8.18□□□□□ -1.1
MBD1-217ENST00000588937 SPINK7P58062 85 aa8.17□□□□□ -1.1
MBD1-217ENST00000588937 ATP11AUNQ6ZP68 121 aa8.15□□□□□ -1.11
MBD1-217ENST00000588937 PCLOQ9Y6V0 5065 aa8.13□□□□□ -1.11
MBD1-217ENST00000588937 A0A1B0GU69 56 aa8.13□□□□□ -1.11
MBD1-217ENST00000588937 SPTSSBQ8NFR3 76 aa8.12□□□□□ -1.11
MBD1-217ENST00000588937 DMBT1Q9UGM3 2413 aaPredicted RBP8.12□□□□□ -1.11
MBD1-217ENST00000588937 CDC42SE1Q9NRR8 79 aa8.1□□□□□ -1.11
MBD1-217ENST00000588937 RPL37P61927 97 aaKnown RBP8.1□□□□□ -1.11
MBD1-217ENST00000588937 LCA10Q71F78 164 aa8.07□□□□□ -1.12
MBD1-217ENST00000588937 XP32Q5T750 250 aa8.05□□□□□ -1.12
MBD1-217ENST00000588937 COX6B2Q6YFQ2 88 aa8.04□□□□□ -1.12
MBD1-217ENST00000588937 KRTAP3-1Q9BYR8 98 aa8.03□□□□□ -1.12
MBD1-217ENST00000588937 A8MU10 97 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms