RNA–Protein interactions for RNA: ENST00000587451.2

CACNA1A-208, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-208ENST00000587451 ANK2Q01484 3957 aa0.34□□□□□ -2.36
CACNA1A-208ENST00000587451 PKD1L2Q7Z442 2459 aa0.34□□□□□ -2.36
CACNA1A-208ENST00000587451 ARHGAP5-AS1Q96IT6 56 aa0.34□□□□□ -2.36
CACNA1A-208ENST00000587451 SPENQ96T58 3664 aaKnown RBP0.34□□□□□ -2.36
CACNA1A-208ENST00000587451 CHD8Q9HCK8 2581 aa0.34□□□□□ -2.36
CACNA1A-208ENST00000587451 CREBBPQ92793 2442 aa0.34□□□□□ -2.36
CACNA1A-208ENST00000587451 UBR5O95071 2799 aaPredicted RBP0.34□□□□□ -2.36
CACNA1A-208ENST00000587451 CEP290O15078 2479 aa0.33□□□□□ -2.36
CACNA1A-208ENST00000587451 FAT2Q9NYQ8 4349 aa0.33□□□□□ -2.36
CACNA1A-208ENST00000587451 PRKDCP78527 4128 aaKnown RBP0.32□□□□□ -2.36
CACNA1A-208ENST00000587451 VPS13DQ5THJ4 4388 aa0.32□□□□□ -2.36
CACNA1A-208ENST00000587451 NBASA2RRP1 2371 aa0.32□□□□□ -2.36
CACNA1A-208ENST00000587451 HECTD1Q9ULT8 2610 aa0.32□□□□□ -2.36
CACNA1A-208ENST00000587451 DEFB104AQ8WTQ1 72 aa0.32□□□□□ -2.36
CACNA1A-208ENST00000587451 PKD1L1Q8TDX9 2849 aa0.32□□□□□ -2.36
CACNA1A-208ENST00000587451 ACACAQ13085 2346 aa0.31□□□□□ -2.36
CACNA1A-208ENST00000587451 UNC79Q9P2D8 2635 aa0.31□□□□□ -2.36
CACNA1A-208ENST00000587451 ACANP16112 2415 aa0.31□□□□□ -2.36
CACNA1A-208ENST00000587451 SPRR2BP35325 72 aa0.31□□□□□ -2.36
CACNA1A-208ENST00000587451 LYSTQ99698 3801 aa0.31□□□□□ -2.36
CACNA1A-208ENST00000587451 TTTY10Q9BZA0 68 aa0.31□□□□□ -2.36
CACNA1A-208ENST00000587451 ZFYVE26Q68DK2 2539 aa0.31□□□□□ -2.36
CACNA1A-208ENST00000587451 SPTBN5Q9NRC6 3674 aaKnown RBP0.31□□□□□ -2.36
CACNA1A-208ENST00000587451 DYNC2H1Q8NCM8 4307 aaKnown RBP0.3□□□□□ -2.36
CACNA1A-208ENST00000587451 SPART-AS1P0CW21 52 aa0.3□□□□□ -2.36
CACNA1A-208ENST00000587451 MGAQ8IWI9 3026 aa0.3□□□□□ -2.36
CACNA1A-208ENST00000587451 DNAH11Q96DT5 4516 aa0.3□□□□□ -2.36
CACNA1A-208ENST00000587451 SYNE1Q8NF91 8797 aaKnown RBP0.29□□□□□ -2.36
CACNA1A-208ENST00000587451 USP24Q9UPU5 2620 aa0.29□□□□□ -2.36
CACNA1A-208ENST00000587451 APC2O95996 2303 aa0.29□□□□□ -2.36
CACNA1A-208ENST00000587451 A0A0C4DFX4 3053 aa0.29□□□□□ -2.36
CACNA1A-208ENST00000587451 KRTAP6-2Q3LI66 62 aa0.29□□□□□ -2.36
CACNA1A-208ENST00000587451 WNK1Q9H4A3 2382 aa0.29□□□□□ -2.36
CACNA1A-208ENST00000587451 SRRM2Q9UQ35 2752 aaKnown RBP0.29□□□□□ -2.36
CACNA1A-208ENST00000587451 HIVEP3Q5T1R4 2406 aa0.29□□□□□ -2.36
CACNA1A-208ENST00000587451 DNAH10Q8IVF4 4471 aa0.29□□□□□ -2.36
CACNA1A-208ENST00000587451 LRP1Q07954 4544 aaKnown RBP0.29□□□□□ -2.36
CACNA1A-208ENST00000587451 CHD7Q9P2D1 2997 aa0.29□□□□□ -2.36
CACNA1A-208ENST00000587451 SACSQ9NZJ4 4579 aa0.29□□□□□ -2.36
CACNA1A-208ENST00000587451 PKHD1L1Q86WI1 4243 aa0.29□□□□□ -2.36
CACNA1A-208ENST00000587451 AKAP9Q99996 3911 aa0.29□□□□□ -2.36
CACNA1A-208ENST00000587451 ZFHX4Q86UP3 3567 aa0.29□□□□□ -2.36
CACNA1A-208ENST00000587451 NBPF19A0A087WUL8 3843 aa0.28□□□□□ -2.36
CACNA1A-208ENST00000587451 PTPN13Q12923 2485 aa0.28□□□□□ -2.36
CACNA1A-208ENST00000587451 HUWE1Q7Z6Z7 4374 aaKnown RBP0.28□□□□□ -2.36
CACNA1A-208ENST00000587451 DNAH8Q96JB1 4490 aa0.28□□□□□ -2.36
CACNA1A-208ENST00000587451 ZZEF1O43149 2961 aa0.28□□□□□ -2.36
CACNA1A-208ENST00000587451 MAP1BP46821 2468 aaKnown RBP0.28□□□□□ -2.36
CACNA1A-208ENST00000587451 COL6A5A8TX70 2615 aa0.28□□□□□ -2.37
CACNA1A-208ENST00000587451 HSPG2P98160 4391 aa0.28□□□□□ -2.37
CACNA1A-208ENST00000587451 DNAH17Q9UFH2 4485 aa0.28□□□□□ -2.37
CACNA1A-208ENST00000587451 DNAH7Q8WXX0 4024 aa0.28□□□□□ -2.37
CACNA1A-208ENST00000587451 MACF1Q9UPN3 7388 aaKnown RBP0.27□□□□□ -2.37
CACNA1A-208ENST00000587451 DCHS2Q6V1P9 2916 aa0.27□□□□□ -2.37
CACNA1A-208ENST00000587451 DNAH2Q9P225 4427 aa0.27□□□□□ -2.37
CACNA1A-208ENST00000587451 DNAH9Q9NYC9 4486 aa0.27□□□□□ -2.37
CACNA1A-208ENST00000587451 MYCBP2O75592 4640 aa0.27□□□□□ -2.37
CACNA1A-208ENST00000587451 DYNC1H1Q14204 4646 aaKnown RBP0.27□□□□□ -2.37
CACNA1A-208ENST00000587451 HRNRQ86YZ3 2850 aaPredicted RBP0.27□□□□□ -2.37
CACNA1A-208ENST00000587451 DNAH5Q8TE73 4624 aa0.27□□□□□ -2.37
CACNA1A-208ENST00000587451 VPS13BQ7Z7G8 4022 aa0.27□□□□□ -2.37
CACNA1A-208ENST00000587451 PKD1P98161 4303 aa0.27□□□□□ -2.37
CACNA1A-208ENST00000587451 ANK3Q12955 4377 aaKnown RBP0.27□□□□□ -2.37
CACNA1A-208ENST00000587451 STAB1Q9NY15 2570 aa0.27□□□□□ -2.37
CACNA1A-208ENST00000587451 PDZD2O15018 2839 aa0.27□□□□□ -2.37
CACNA1A-208ENST00000587451 SMG1Q96Q15 3661 aaKnown RBP0.26□□□□□ -2.37
CACNA1A-208ENST00000587451 NAV2Q8IVL1 2488 aa0.26□□□□□ -2.37
CACNA1A-208ENST00000587451 CCDC168Q8NDH2 2452 aa0.26□□□□□ -2.37
CACNA1A-208ENST00000587451 DNAH3Q8TD57 4116 aa0.26□□□□□ -2.37
CACNA1A-208ENST00000587451 DNAH6Q9C0G6 4158 aa0.26□□□□□ -2.37
CACNA1A-208ENST00000587451 SPTBN4Q9H254 2564 aa0.26□□□□□ -2.37
CACNA1A-208ENST00000587451 DNAH1Q9P2D7 4330 aa0.26□□□□□ -2.37
CACNA1A-208ENST00000587451 FAT3Q8TDW7 4589 aa0.26□□□□□ -2.37
CACNA1A-208ENST00000587451 H3BSH0 61 aa0.26□□□□□ -2.37
CACNA1A-208ENST00000587451 FAM186AA6NE01 2351 aa0.26□□□□□ -2.37
CACNA1A-208ENST00000587451 LRRK2Q5S007 2527 aa0.26□□□□□ -2.37
CACNA1A-208ENST00000587451 NBEAL2Q6ZNJ1 2754 aa0.26□□□□□ -2.37
CACNA1A-208ENST00000587451 HECTD4Q9Y4D8 3996 aa0.25□□□□□ -2.37
CACNA1A-208ENST00000587451 RANBP2P49792 3224 aaKnown RBP0.25□□□□□ -2.37
CACNA1A-208ENST00000587451 FLNCQ14315 2725 aa0.25□□□□□ -2.37
CACNA1A-208ENST00000587451 NCOR2Q9Y618 2525 aa0.25□□□□□ -2.37
CACNA1A-208ENST00000587451 FLGP20930 4061 aaPredicted RBP0.25□□□□□ -2.37
CACNA1A-208ENST00000587451 CMYA5Q8N3K9 4069 aa0.25□□□□□ -2.37
CACNA1A-208ENST00000587451 KMT2AQ03164 3969 aa0.25□□□□□ -2.37
CACNA1A-208ENST00000587451 SPRR2AP35326 72 aa0.25□□□□□ -2.37
CACNA1A-208ENST00000587451 RELNP78509 3460 aa0.25□□□□□ -2.37
CACNA1A-208ENST00000587451 COL12A1Q99715 3063 aa0.25□□□□□ -2.37
CACNA1A-208ENST00000587451 FRYQ5TBA9 3013 aa0.25□□□□□ -2.37
CACNA1A-208ENST00000587451 COL7A1Q02388 2944 aa0.25□□□□□ -2.37
CACNA1A-208ENST00000587451 NF1P21359 2839 aa0.25□□□□□ -2.37
CACNA1A-208ENST00000587451 ITPR1Q14643 2758 aa0.25□□□□□ -2.37
CACNA1A-208ENST00000587451 PKHD1P08F94 4074 aa0.25□□□□□ -2.37
CACNA1A-208ENST00000587451 SPG11Q96JI7 2443 aa0.25□□□□□ -2.37
CACNA1A-208ENST00000587451 DMBT1Q9UGM3 2413 aaPredicted RBP0.25□□□□□ -2.37
CACNA1A-208ENST00000587451 APOBP04114 4563 aaKnown RBP0.25□□□□□ -2.37
CACNA1A-208ENST00000587451 C5orf42Q9H799 3197 aa0.24□□□□□ -2.37
CACNA1A-208ENST00000587451 ANKRD11Q6UB99 2663 aaPredicted RBP0.24□□□□□ -2.37
CACNA1A-208ENST00000587451 RIF1Q5UIP0 2472 aaKnown RBP0.24□□□□□ -2.37
CACNA1A-208ENST00000587451 SONP18583 2426 aaKnown RBP0.24□□□□□ -2.37
CACNA1A-208ENST00000587451 PLECQ15149 4684 aaKnown RBP0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms