RNA–Protein interactions for RNA: ENST00000587303.5

PTPRS-204, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRS, Length 6,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-204ENST00000587303 CRYBG3Q68DQ2 2970 aa7.58□□□□□ -1.2
PTPRS-204ENST00000587303 EYSQ5T1H1 3165 aa7.57□□□□□ -1.2
PTPRS-204ENST00000587303 IGSF10Q6WRI0 2623 aa7.56□□□□□ -1.2
PTPRS-204ENST00000587303 KRTAP10-8P60410 259 aa7.56□□□□□ -1.2
PTPRS-204ENST00000587303 USP34Q70CQ2 3546 aa7.55□□□□□ -1.2
PTPRS-204ENST00000587303 MYO15AQ9UKN7 3530 aa7.53□□□□□ -1.2
PTPRS-204ENST00000587303 FRYLO94915 3013 aa7.53□□□□□ -1.2
PTPRS-204ENST00000587303 ATMQ13315 3056 aa7.52□□□□□ -1.21
PTPRS-204ENST00000587303 ITPR2Q14571 2701 aa7.52□□□□□ -1.21
PTPRS-204ENST00000587303 DMXL2Q8TDJ6 3036 aa7.51□□□□□ -1.21
PTPRS-204ENST00000587303 KRTAP13-1Q8IUC0 172 aa7.5□□□□□ -1.21
PTPRS-204ENST00000587303 TACC2O95359 2948 aa7.47□□□□□ -1.21
PTPRS-204ENST00000587303 A6NN06 94 aa7.47□□□□□ -1.21
PTPRS-204ENST00000587303 COL12A1Q99715 3063 aa7.46□□□□□ -1.22
PTPRS-204ENST00000587303 UBR5O95071 2799 aaPredicted RBP7.45□□□□□ -1.22
PTPRS-204ENST00000587303 NSD1Q96L73 2696 aaPredicted RBP7.44□□□□□ -1.22
PTPRS-204ENST00000587303 ADGRG4Q8IZF6 3080 aa7.43□□□□□ -1.22
PTPRS-204ENST00000587303 ASH1LQ9NR48 2969 aaKnown RBP7.39□□□□□ -1.23
PTPRS-204ENST00000587303 KRTAP10-10P60014 251 aa7.38□□□□□ -1.23
PTPRS-204ENST00000587303 XP32Q5T750 250 aa7.38□□□□□ -1.23
PTPRS-204ENST00000587303 NBEAQ8NFP9 2946 aa7.36□□□□□ -1.23
PTPRS-204ENST00000587303 ITPR1Q14643 2758 aa7.36□□□□□ -1.23
PTPRS-204ENST00000587303 UTP20O75691 2785 aaKnown RBP7.36□□□□□ -1.23
PTPRS-204ENST00000587303 ASPMQ8IZT6 3477 aa7.33□□□□□ -1.24
PTPRS-204ENST00000587303 HIVEP1P15822 2718 aa7.33□□□□□ -1.24
PTPRS-204ENST00000587303 APCP25054 2843 aa7.32□□□□□ -1.24
PTPRS-204ENST00000587303 KMT2BQ9UMN6 2715 aaPredicted RBP7.31□□□□□ -1.24
PTPRS-204ENST00000587303 WDFY3Q8IZQ1 3526 aa7.31□□□□□ -1.24
PTPRS-204ENST00000587303 ZZEF1O43149 2961 aa7.28□□□□□ -1.24
PTPRS-204ENST00000587303 TNRC18O15417 2968 aaPredicted RBP7.27□□□□□ -1.25
PTPRS-204ENST00000587303 TPRXLQ17RH7 258 aa7.26□□□□□ -1.25
PTPRS-204ENST00000587303 PRO2289Q9P1D8 64 aa7.26□□□□□ -1.25
PTPRS-204ENST00000587303 DMXL1Q9Y485 3027 aa7.25□□□□□ -1.25
PTPRS-204ENST00000587303 KRTAP1-4P0C5Y4 121 aa7.24□□□□□ -1.25
PTPRS-204ENST00000587303 TENM4Q6N022 2769 aa7.22□□□□□ -1.25
PTPRS-204ENST00000587303 LOC400499M0QZD8 3231 aa7.2□□□□□ -1.26
PTPRS-204ENST00000587303 P0C880 135 aa7.19□□□□□ -1.26
PTPRS-204ENST00000587303 PP632Q6XCG6 107 aa7.15□□□□□ -1.26
PTPRS-204ENST00000587303 DCHS1Q96JQ0 3298 aa7.15□□□□□ -1.27
PTPRS-204ENST00000587303 FLNCQ14315 2725 aa7.13□□□□□ -1.27
PTPRS-204ENST00000587303 ZFHX4Q86UP3 3567 aa7.12□□□□□ -1.27
PTPRS-204ENST00000587303 CELSR2Q9HCU4 2923 aa7.12□□□□□ -1.27
PTPRS-204ENST00000587303 RELNP78509 3460 aa7.09□□□□□ -1.27
PTPRS-204ENST00000587303 KRTAP13-3Q3SY46 172 aa7.08□□□□□ -1.28
PTPRS-204ENST00000587303 H0YAA0 97 aa7.05□□□□□ -1.28
PTPRS-204ENST00000587303 NBPF19A0A087WUL8 3843 aa7.05□□□□□ -1.28
PTPRS-204ENST00000587303 DCHS2Q6V1P9 2916 aa7.02□□□□□ -1.29
PTPRS-204ENST00000587303 CSMD1Q96PZ7 3565 aa7.01□□□□□ -1.29
PTPRS-204ENST00000587303 LAMA5O15230 3695 aa6.99□□□□□ -1.29
PTPRS-204ENST00000587303 HRNRQ86YZ3 2850 aaPredicted RBP6.98□□□□□ -1.29
PTPRS-204ENST00000587303 ZANQ9Y493 2812 aa6.92□□□□□ -1.3
PTPRS-204ENST00000587303 FBN2P35556 2912 aa6.91□□□□□ -1.3
PTPRS-204ENST00000587303 DMDP11532 3685 aa6.9□□□□□ -1.3
PTPRS-204ENST00000587303 CELSR1Q9NYQ6 3014 aa6.87□□□□□ -1.31
PTPRS-204ENST00000587303 TENM1Q9UKZ4 2725 aa6.85□□□□□ -1.31
PTPRS-204ENST00000587303 TENM2Q9NT68 2774 aa6.85□□□□□ -1.31
PTPRS-204ENST00000587303 NIPBLQ6KC79 2804 aaeCLIP6.83□□□□□ -1.32
PTPRS-204ENST00000587303 NF1P21359 2839 aa6.81□□□□□ -1.32
PTPRS-204ENST00000587303 SMG1Q96Q15 3661 aaKnown RBP6.81□□□□□ -1.32
PTPRS-204ENST00000587303 KRTAP12-2P59991 146 aa6.79□□□□□ -1.32
PTPRS-204ENST00000587303 TENM3Q9P273 2699 aa6.75□□□□□ -1.33
PTPRS-204ENST00000587303 SVEP1Q4LDE5 3571 aa6.71□□□□□ -1.34
PTPRS-204ENST00000587303 CRCT1Q9UGL9 99 aa6.67□□□□□ -1.34
PTPRS-204ENST00000587303 SPENQ96T58 3664 aaKnown RBP6.65□□□□□ -1.34
PTPRS-204ENST00000587303 KRTAP15-1Q3LI76 137 aa6.63□□□□□ -1.35
PTPRS-204ENST00000587303 TGP01266 2768 aa6.62□□□□□ -1.35
PTPRS-204ENST00000587303 ZFHX3Q15911 3703 aa6.6□□□□□ -1.35
PTPRS-204ENST00000587303 MXRA5Q9NR99 2828 aa6.59□□□□□ -1.35
PTPRS-204ENST00000587303 PKD1L1Q8TDX9 2849 aa6.59□□□□□ -1.36
PTPRS-204ENST00000587303 CUBNO60494 3623 aa6.58□□□□□ -1.36
PTPRS-204ENST00000587303 VWFP04275 2813 aa6.57□□□□□ -1.36
PTPRS-204ENST00000587303 CSMD2Q7Z408 3487 aa6.57□□□□□ -1.36
PTPRS-204ENST00000587303 KRTAP13-4Q3LI77 160 aa6.56□□□□□ -1.36
PTPRS-204ENST00000587303 ANK3Q12955 4377 aaKnown RBP6.54□□□□□ -1.36
PTPRS-204ENST00000587303 KRTAP12-1P59990 96 aa6.48□□□□□ -1.37
PTPRS-204ENST00000587303 MUC3AQ02505 3323 aa6.47□□□□□ -1.37
PTPRS-204ENST00000587303 KRTAP3-1Q9BYR8 98 aa6.42□□□□□ -1.38
PTPRS-204ENST00000587303 PDZD2O15018 2839 aa6.42□□□□□ -1.38
PTPRS-204ENST00000587303 BSNQ9UPA5 3926 aa6.35□□□□□ -1.39
PTPRS-204ENST00000587303 TRRAPQ9Y4A5 3859 aa6.34□□□□□ -1.39
PTPRS-204ENST00000587303 FBN1P35555 2871 aaKnown RBP6.31□□□□□ -1.4
PTPRS-204ENST00000587303 VPS13CQ709C8 3753 aa6.28□□□□□ -1.4
PTPRS-204ENST00000587303 HUWE1Q7Z6Z7 4374 aaKnown RBP6.26□□□□□ -1.41
PTPRS-204ENST00000587303 MT1HL1P0DM35 61 aa6.24□□□□□ -1.41
PTPRS-204ENST00000587303 OTOGQ6ZRI0 2925 aa6.24□□□□□ -1.41
PTPRS-204ENST00000587303 KRTAP4-5Q9BYR2 181 aa6.23□□□□□ -1.41
PTPRS-204ENST00000587303 KRTAP10-12P60413 245 aa6.2□□□□□ -1.42
PTPRS-204ENST00000587303 KRTAP10-6P60371 365 aaPredicted RBP6.17□□□□□ -1.42
PTPRS-204ENST00000587303 CSMD3Q7Z407 3707 aa6.11□□□□□ -1.43
PTPRS-204ENST00000587303 FBN3Q75N90 2809 aa6.11□□□□□ -1.43
PTPRS-204ENST00000587303 SRRM2Q9UQ35 2752 aaKnown RBP6.11□□□□□ -1.43
PTPRS-204ENST00000587303 MEGF8Q7Z7M0 2845 aa6.07□□□□□ -1.44
PTPRS-204ENST00000587303 ALMS1Q8TCU4 4167 aa6.02□□□□□ -1.45
PTPRS-204ENST00000587303 AKAP9Q99996 3911 aa6.02□□□□□ -1.45
PTPRS-204ENST00000587303 INE1O15225 51 aa6.02□□□□□ -1.45
PTPRS-204ENST00000587303 COL7A1Q02388 2944 aa5.99□□□□□ -1.45
PTPRS-204ENST00000587303 KRTAP3-3Q9BYR6 98 aa5.98□□□□□ -1.45
PTPRS-204ENST00000587303 KRTAP10-5P60370 271 aa5.97□□□□□ -1.45
PTPRS-204ENST00000587303 KRTAP12-3P60328 96 aa5.95□□□□□ -1.46
PTPRS-204ENST00000587303 KRTAP3-2Q9BYR7 98 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms