RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 CRYGAP11844 174 aa4.68□□□□□ -1.66
VMP1-204ENST00000587259 Q6ZVQ6 151 aa4.68□□□□□ -1.66
VMP1-204ENST00000587259 C3orf22Q8N5N4 141 aa4.68□□□□□ -1.66
VMP1-204ENST00000587259 MUC2Q02817 5179 aa4.67□□□□□ -1.66
VMP1-204ENST00000587259 PCP4P48539 62 aa4.67□□□□□ -1.66
VMP1-204ENST00000587259 NREPQ16612 68 aa4.67□□□□□ -1.66
VMP1-204ENST00000587259 KRTAP3-1Q9BYR8 98 aa4.67□□□□□ -1.66
VMP1-204ENST00000587259 IGFL1Q6UW32 110 aa4.66□□□□□ -1.66
VMP1-204ENST00000587259 IGKV3D-7A0A0C4DH55 119 aa4.64□□□□□ -1.67
VMP1-204ENST00000587259 A0A1W2PNM2 257 aa4.64□□□□□ -1.67
VMP1-204ENST00000587259 HIST1H4AP62805 103 aaKnown RBP4.64□□□□□ -1.67
VMP1-204ENST00000587259 C9orf153Q5TBE3 101 aa4.64□□□□□ -1.67
VMP1-204ENST00000587259 SS18L2Q9UHA2 77 aa4.64□□□□□ -1.67
VMP1-204ENST00000587259 FAM236AA0A1B0GUQ0 79 aa4.63□□□□□ -1.67
VMP1-204ENST00000587259 FAM236BA0A1B0GV22 79 aa4.63□□□□□ -1.67
VMP1-204ENST00000587259 ATOX1O00244 68 aa4.63□□□□□ -1.67
VMP1-204ENST00000587259 BPY2O14599 106 aa4.63□□□□□ -1.67
VMP1-204ENST00000587259 PRR4Q16378 134 aa4.63□□□□□ -1.67
VMP1-204ENST00000587259 FAM229BQ4G0N7 80 aa4.62□□□□□ -1.67
VMP1-204ENST00000587259 ANAPC13Q9BS18 74 aa4.62□□□□□ -1.67
VMP1-204ENST00000587259 IGLV9-49A0A0B4J1Y8 123 aa4.61□□□□□ -1.67
VMP1-204ENST00000587259 J3KT08 172 aa4.61□□□□□ -1.67
VMP1-204ENST00000587259 KRTAP1-4P0C5Y4 121 aa4.61□□□□□ -1.67
VMP1-204ENST00000587259 SMIM20Q8N5G0 67 aa4.61□□□□□ -1.67
VMP1-204ENST00000587259 CD164Q04900 197 aa4.6□□□□□ -1.67
VMP1-204ENST00000587259 SSBP3-AS1Q7Z2R9 100 aa4.6□□□□□ -1.67
VMP1-204ENST00000587259 A0A087WSZ3 146 aa4.59□□□□□ -1.67
VMP1-204ENST00000587259 MOBPQ13875 183 aa4.59□□□□□ -1.67
VMP1-204ENST00000587259 A0A087WVE0 104 aa4.55□□□□□ -1.68
VMP1-204ENST00000587259 NDUFB1O75438 58 aa4.55□□□□□ -1.68
VMP1-204ENST00000587259 IGKV4-1P06312 121 aa4.55□□□□□ -1.68
VMP1-204ENST00000587259 FAT4Q6V0I7 4981 aa4.54□□□□□ -1.68
VMP1-204ENST00000587259 UQCRQO14949 82 aa4.54□□□□□ -1.68
VMP1-204ENST00000587259 SERP2Q8N6R1 65 aa4.54□□□□□ -1.68
VMP1-204ENST00000587259 RETNLBQ9BQ08 111 aa4.54□□□□□ -1.68
VMP1-204ENST00000587259 LIMD2Q9BT23 127 aa4.54□□□□□ -1.68
VMP1-204ENST00000587259 A0A087X002 238 aa4.53□□□□□ -1.68
VMP1-204ENST00000587259 A8MWP4 228 aa4.53□□□□□ -1.68
VMP1-204ENST00000587259 ASB16-AS1Q495Z4 193 aa4.53□□□□□ -1.68
VMP1-204ENST00000587259 LINC00472Q9H8W2 130 aa4.53□□□□□ -1.68
VMP1-204ENST00000587259 ANAPC11Q9NYG5 84 aa4.53□□□□□ -1.68
VMP1-204ENST00000587259 A0A0U1RQV1 116 aa4.52□□□□□ -1.69
VMP1-204ENST00000587259 COX7CP15954 63 aa4.52□□□□□ -1.69
VMP1-204ENST00000587259 DSCR10P59022 87 aa4.52□□□□□ -1.69
VMP1-204ENST00000587259 Q5XG85 94 aa4.52□□□□□ -1.69
VMP1-204ENST00000587259 TRAV7A0A075B6U4 112 aa4.51□□□□□ -1.69
VMP1-204ENST00000587259 A0A0G2JQZ4 141 aa4.51□□□□□ -1.69
VMP1-204ENST00000587259 HCG22E2RYF7 251 aa4.51□□□□□ -1.69
VMP1-204ENST00000587259 RPS29P62273 56 aaKnown RBP4.51□□□□□ -1.69
VMP1-204ENST00000587259 K7EQZ3 153 aa4.5□□□□□ -1.69
VMP1-204ENST00000587259 SPAG11AQ6PDA7 123 aa4.5□□□□□ -1.69
VMP1-204ENST00000587259 PRR15Q8IV56 129 aa4.5□□□□□ -1.69
VMP1-204ENST00000587259 SPINK1P00995 79 aa4.49□□□□□ -1.69
VMP1-204ENST00000587259 HRCT1Q6UXD1 115 aa4.49□□□□□ -1.69
VMP1-204ENST00000587259 Q8N9L7 120 aa4.49□□□□□ -1.69
VMP1-204ENST00000587259 TYMSOSQ8TAI1 123 aa4.49□□□□□ -1.69
VMP1-204ENST00000587259 KRTAP13-2Q52LG2 175 aa4.47□□□□□ -1.69
VMP1-204ENST00000587259 Q96NJ1 140 aa4.47□□□□□ -1.69
VMP1-204ENST00000587259 A0A1B0GVX0 72 aa4.46□□□□□ -1.7
VMP1-204ENST00000587259 C8orf87E5RJ46 101 aa4.46□□□□□ -1.7
VMP1-204ENST00000587259 CASC2Q6XLA1 102 aa4.46□□□□□ -1.7
VMP1-204ENST00000587259 NDUFC1O43677 76 aa4.45□□□□□ -1.7
VMP1-204ENST00000587259 DEFB116Q30KQ4 102 aa4.45□□□□□ -1.7
VMP1-204ENST00000587259 LINC00304Q8N9R0 145 aa4.45□□□□□ -1.7
VMP1-204ENST00000587259 OCR1Q9BZK8 76 aa4.45□□□□□ -1.7
VMP1-204ENST00000587259 CCDC179H3BU77 68 aa4.44□□□□□ -1.7
VMP1-204ENST00000587259 hDV103S1A0JD37 113 aa4.43□□□□□ -1.7
VMP1-204ENST00000587259 KLKP1Q107X0 134 aa4.43□□□□□ -1.7
VMP1-204ENST00000587259 C5orf47Q569G3 176 aa4.43□□□□□ -1.7
VMP1-204ENST00000587259 TP53AIP1Q9HCN2 124 aa4.43□□□□□ -1.7
VMP1-204ENST00000587259 IGLV7-46A0A075B6I9 117 aa4.42□□□□□ -1.7
VMP1-204ENST00000587259 MMP24-AS1A0A0U1RRL7 71 aa4.42□□□□□ -1.7
VMP1-204ENST00000587259 WFDC13Q8IUB5 93 aa4.42□□□□□ -1.7
VMP1-204ENST00000587259 TMEM254Q8TBM7 123 aa4.42□□□□□ -1.7
VMP1-204ENST00000587259 KRTAP4-1Q9BYQ7 146 aa4.42□□□□□ -1.7
VMP1-204ENST00000587259 C8orf17Q9NRJ1 99 aa4.42□□□□□ -1.7
VMP1-204ENST00000587259 MUC17Q685J3 4493 aa4.42□□□□□ -1.7
VMP1-204ENST00000587259 IGHV6-1A0A0B4J1U7 121 aa4.41□□□□□ -1.7
VMP1-204ENST00000587259 H3BPC8 53 aa4.41□□□□□ -1.7
VMP1-204ENST00000587259 MP68P56378 58 aa4.41□□□□□ -1.7
VMP1-204ENST00000587259 C20orf197Q8N268 126 aa4.41□□□□□ -1.7
VMP1-204ENST00000587259 TMEM258P61165 79 aa4.4□□□□□ -1.71
VMP1-204ENST00000587259 TPRXLQ17RH7 258 aa4.4□□□□□ -1.71
VMP1-204ENST00000587259 C1orf195Q5TG92 126 aa4.39□□□□□ -1.71
VMP1-204ENST00000587259 MRPL34Q9BQ48 92 aaKnown RBP4.39□□□□□ -1.71
VMP1-204ENST00000587259 FSIP2Q5CZC0 6907 aa4.38□□□□□ -1.71
VMP1-204ENST00000587259 ATP5EP56381 51 aaPredicted RBP4.38□□□□□ -1.71
VMP1-204ENST00000587259 TRAV22A0A0B4J277 110 aa4.37□□□□□ -1.71
VMP1-204ENST00000587259 LINC00313P59037 77 aa4.37□□□□□ -1.71
VMP1-204ENST00000587259 CRCT1Q9UGL9 99 aa4.37□□□□□ -1.71
VMP1-204ENST00000587259 NDUFS5O43920 106 aa4.35□□□□□ -1.71
VMP1-204ENST00000587259 H0Y9P7 68 aa4.34□□□□□ -1.71
VMP1-204ENST00000587259 KRTAP13-3Q3SY46 172 aa4.33□□□□□ -1.72
VMP1-204ENST00000587259 SNURFQ9Y675 71 aa4.33□□□□□ -1.72
VMP1-204ENST00000587259 H7BZZ5 65 aa4.32□□□□□ -1.72
VMP1-204ENST00000587259 Q8N9P0 234 aaPredicted RBP4.32□□□□□ -1.72
VMP1-204ENST00000587259 FAM236DA0A1B0GTK5 79 aa4.31□□□□□ -1.72
VMP1-204ENST00000587259 FAM236CP0DP71 79 aa4.31□□□□□ -1.72
VMP1-204ENST00000587259 FP248Q71RG6 208 aaPredicted RBP4.31□□□□□ -1.72
VMP1-204ENST00000587259 ZCCHC13Q8WW36 166 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms