RNA–Protein interactions for RNA: ENST00000587235.5

TCF3-210, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-210ENST00000587235 TRBV20-1A0A075B6N2 111 aa13.01□□□□□ -0.33
TCF3-210ENST00000587235 KRTAP16-1A8MUX0 517 aa13.01□□□□□ -0.33
TCF3-210ENST00000587235 J3KT08 172 aa13□□□□□ -0.33
TCF3-210ENST00000587235 PDE6GP18545 87 aa13□□□□□ -0.33
TCF3-210ENST00000587235 IGHV6-1A0A0B4J1U7 121 aa12.99□□□□□ -0.33
TCF3-210ENST00000587235 Q6ZQT0 140 aa12.99□□□□□ -0.33
TCF3-210ENST00000587235 LOC110117498A0A087WWA1 95 aa12.98□□□□□ -0.33
TCF3-210ENST00000587235 C8orf87E5RJ46 101 aa12.97□□□□□ -0.33
TCF3-210ENST00000587235 NOTCH2NLQ7Z3S9 236 aa12.96□□□□□ -0.33
TCF3-210ENST00000587235 A0A1B0GVX0 72 aa12.95□□□□□ -0.34
TCF3-210ENST00000587235 LOC105371267A0A1B0GV96 52 aa12.93□□□□□ -0.34
TCF3-210ENST00000587235 BATFQ16520 125 aa12.93□□□□□ -0.34
TCF3-210ENST00000587235 NDUFB1O75438 58 aa12.88□□□□□ -0.35
TCF3-210ENST00000587235 C9orf118A6NHY6 69 aa12.86□□□□□ -0.35
TCF3-210ENST00000587235 C14orf132Q9NPU4 83 aa12.85□□□□□ -0.35
TCF3-210ENST00000587235 A0A1W2PPM0 123 aa12.79□□□□□ -0.36
TCF3-210ENST00000587235 A8MWP4 228 aa12.79□□□□□ -0.36
TCF3-210ENST00000587235 H3BT86 120 aa12.79□□□□□ -0.36
TCF3-210ENST00000587235 TAX1BP3O14907 124 aa12.79□□□□□ -0.36
TCF3-210ENST00000587235 KRTAP9-8Q9BYQ0 159 aa12.78□□□□□ -0.36
TCF3-210ENST00000587235 NREPQ16612 68 aa12.75□□□□□ -0.37
TCF3-210ENST00000587235 Q8N9P0 234 aaPredicted RBP12.73□□□□□ -0.37
TCF3-210ENST00000587235 ZCCHC13Q8WW36 166 aaKnown RBP12.72□□□□□ -0.37
TCF3-210ENST00000587235 RBM12B-AS1Q9P1G2 102 aa12.72□□□□□ -0.37
TCF3-210ENST00000587235 IGKV3D-7A0A0C4DH55 119 aa12.71□□□□□ -0.37
TCF3-210ENST00000587235 C8orf17Q9NRJ1 99 aa12.71□□□□□ -0.37
TCF3-210ENST00000587235 FAM236DA0A1B0GTK5 79 aa12.7□□□□□ -0.38
TCF3-210ENST00000587235 FAM236CP0DP71 79 aa12.7□□□□□ -0.38
TCF3-210ENST00000587235 MPLKIPQ8TAP9 179 aa12.69□□□□□ -0.38
TCF3-210ENST00000587235 HRES1P13985 223 aa12.68□□□□□ -0.38
TCF3-210ENST00000587235 PRR15Q8IV56 129 aa12.67□□□□□ -0.38
TCF3-210ENST00000587235 Q6ZVQ6 151 aa12.63□□□□□ -0.39
TCF3-210ENST00000587235 MTURNQ8N3F0 131 aa12.62□□□□□ -0.39
TCF3-210ENST00000587235 SPCS1Q9Y6A9 102 aa12.61□□□□□ -0.39
TCF3-210ENST00000587235 SPINK7P58062 85 aa12.58□□□□□ -0.4
TCF3-210ENST00000587235 USH2AO75445 5202 aa12.58□□□□□ -0.4
TCF3-210ENST00000587235 MT2AP02795 61 aa12.57□□□□□ -0.4
TCF3-210ENST00000587235 COL5A1-AS1Q5SY13 56 aa12.57□□□□□ -0.4
TCF3-210ENST00000587235 TMEM254Q8TBM7 123 aa12.54□□□□□ -0.4
TCF3-210ENST00000587235 MMP24-AS1A0A0U1RRL7 71 aa12.52□□□□□ -0.41
TCF3-210ENST00000587235 MRPL34Q9BQ48 92 aaKnown RBP12.52□□□□□ -0.41
TCF3-210ENST00000587235 BPY2O14599 106 aa12.51□□□□□ -0.41
TCF3-210ENST00000587235 SSPOA2VEC9 5147 aa12.51□□□□□ -0.41
TCF3-210ENST00000587235 hDV103S1A0JD37 113 aa12.49□□□□□ -0.41
TCF3-210ENST00000587235 K7EQZ3 153 aa12.49□□□□□ -0.41
TCF3-210ENST00000587235 MT1FP04733 61 aa12.47□□□□□ -0.41
TCF3-210ENST00000587235 SMCPP49901 116 aaPredicted RBP12.46□□□□□ -0.41
TCF3-210ENST00000587235 KRTAP10-10P60014 251 aa12.42□□□□□ -0.42
TCF3-210ENST00000587235 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.41□□□□□ -0.42
TCF3-210ENST00000587235 K7EP34 96 aa12.41□□□□□ -0.42
TCF3-210ENST00000587235 PRO0461Q9UI25 63 aa12.41□□□□□ -0.42
TCF3-210ENST00000587235 LCE2BO14633 110 aa12.38□□□□□ -0.43
TCF3-210ENST00000587235 NDUFS5O43920 106 aa12.38□□□□□ -0.43
TCF3-210ENST00000587235 KRTAP9-3Q9BYQ3 159 aa12.38□□□□□ -0.43
TCF3-210ENST00000587235 WFDC13Q8IUB5 93 aa12.37□□□□□ -0.43
TCF3-210ENST00000587235 UBL5Q9BZL1 73 aa12.34□□□□□ -0.43
TCF3-210ENST00000587235 KRTAP9-7A8MTY7 169 aa12.33□□□□□ -0.44
TCF3-210ENST00000587235 GTF2H5Q6ZYL4 71 aa12.32□□□□□ -0.44
TCF3-210ENST00000587235 CASC2Q6XLA1 102 aa12.31□□□□□ -0.44
TCF3-210ENST00000587235 LINC00846Q9NV44 126 aa12.3□□□□□ -0.44
TCF3-210ENST00000587235 Q8N9L7 120 aa12.29□□□□□ -0.44
TCF3-210ENST00000587235 FCGBPQ9Y6R7 5405 aaPredicted RBP12.27□□□□□ -0.44
TCF3-210ENST00000587235 KRTAP19-1Q8IUB9 90 aa12.26□□□□□ -0.45
TCF3-210ENST00000587235 F8W1H4 67 aa12.25□□□□□ -0.45
TCF3-210ENST00000587235 CXCL6P80162 114 aa12.21□□□□□ -0.45
TCF3-210ENST00000587235 Q5W150 140 aa12.21□□□□□ -0.45
TCF3-210ENST00000587235 HCG22E2RYF7 251 aa12.2□□□□□ -0.46
TCF3-210ENST00000587235 C7orf65Q6ZTY9 151 aa12.2□□□□□ -0.46
TCF3-210ENST00000587235 PCP4L1A6NKN8 68 aa12.18□□□□□ -0.46
TCF3-210ENST00000587235 IGKV2D-30A0A075B6S6 120 aa12.17□□□□□ -0.46
TCF3-210ENST00000587235 IGKV2-30P06310 120 aa12.17□□□□□ -0.46
TCF3-210ENST00000587235 H1FX-AS1Q4G0G2 97 aa12.16□□□□□ -0.46
TCF3-210ENST00000587235 ETDBQ3ZM63 59 aa12.11□□□□□ -0.47
TCF3-210ENST00000587235 TP53AIP1Q9HCN2 124 aa12.02□□□□□ -0.49
TCF3-210ENST00000587235 KRTAP19-6Q3LI70 58 aa11.98□□□□□ -0.49
TCF3-210ENST00000587235 ACYP1P07311 99 aa11.96□□□□□ -0.49
TCF3-210ENST00000587235 C4orf26Q17RF5 130 aa11.95□□□□□ -0.5
TCF3-210ENST00000587235 MACF1Q9UPN3 7388 aaKnown RBP11.91□□□□□ -0.5
TCF3-210ENST00000587235 FAM240AA0A1B0GVK7 77 aa11.87□□□□□ -0.51
TCF3-210ENST00000587235 ATP5EP2Q5VTU8 51 aa11.83□□□□□ -0.52
TCF3-210ENST00000587235 SYNE2Q8WXH0 6885 aaKnown RBP11.83□□□□□ -0.52
TCF3-210ENST00000587235 C1orf64Q8NEQ6 169 aa11.78□□□□□ -0.52
TCF3-210ENST00000587235 KRTAP3-1Q9BYR8 98 aa11.78□□□□□ -0.52
TCF3-210ENST00000587235 S4R3F8 94 aa11.72□□□□□ -0.53
TCF3-210ENST00000587235 TRAV22A0A0B4J277 110 aa11.7□□□□□ -0.54
TCF3-210ENST00000587235 CYP4F30PQ9H0H9 118 aa11.7□□□□□ -0.54
TCF3-210ENST00000587235 C5orf47Q569G3 176 aa11.69□□□□□ -0.54
TCF3-210ENST00000587235 LOC101927531A0A1B0GV80 90 aa11.67□□□□□ -0.54
TCF3-210ENST00000587235 HIST1H4AP62805 103 aaKnown RBP11.67□□□□□ -0.54
TCF3-210ENST00000587235 CSAG1Q6PB30 78 aa11.67□□□□□ -0.54
TCF3-210ENST00000587235 UQCRQO14949 82 aa11.62□□□□□ -0.55
TCF3-210ENST00000587235 LINC00643Q86TS7 51 aa11.62□□□□□ -0.55
TCF3-210ENST00000587235 LCA10Q71F78 164 aa11.61□□□□□ -0.55
TCF3-210ENST00000587235 ATOX1O00244 68 aa11.59□□□□□ -0.55
TCF3-210ENST00000587235 FAM236AA0A1B0GUQ0 79 aa11.54□□□□□ -0.56
TCF3-210ENST00000587235 FAM236BA0A1B0GV22 79 aa11.54□□□□□ -0.56
TCF3-210ENST00000587235 KRTAP6-3Q3LI67 103 aa11.54□□□□□ -0.56
TCF3-210ENST00000587235 A0A1B0GV90 55 aa11.52□□□□□ -0.57
TCF3-210ENST00000587235 H0Y9P7 68 aa11.5□□□□□ -0.57
TCF3-210ENST00000587235 A0A087WVE0 104 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms