RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 KRTAP10-8P60410 259 aa11.74□□□□□ -0.53
ATG4D-204ENST00000586417 MT1HL1P0DM35 61 aa11.72□□□□□ -0.53
ATG4D-204ENST00000586417 NDUFB1O75438 58 aa11.72□□□□□ -0.53
ATG4D-204ENST00000586417 OXTP01178 125 aa11.71□□□□□ -0.54
ATG4D-204ENST00000586417 SMIM20Q8N5G0 67 aa11.7□□□□□ -0.54
ATG4D-204ENST00000586417 TRAV7A0A075B6U4 112 aa11.69□□□□□ -0.54
ATG4D-204ENST00000586417 KRTAP29-1A8MX34 341 aaPredicted RBP11.69□□□□□ -0.54
ATG4D-204ENST00000586417 UQCRQO14949 82 aa11.69□□□□□ -0.54
ATG4D-204ENST00000586417 C4orf48Q5BLP8 95 aa11.69□□□□□ -0.54
ATG4D-204ENST00000586417 SPINK1P00995 79 aa11.69□□□□□ -0.54
ATG4D-204ENST00000586417 LINC00304Q8N9R0 145 aa11.69□□□□□ -0.54
ATG4D-204ENST00000586417 LIMD2Q9BT23 127 aa11.69□□□□□ -0.54
ATG4D-204ENST00000586417 MMP24-AS1A0A0U1RRL7 71 aa11.68□□□□□ -0.54
ATG4D-204ENST00000586417 WFDC13Q8IUB5 93 aa11.68□□□□□ -0.54
ATG4D-204ENST00000586417 OCR1Q9BZK8 76 aa11.68□□□□□ -0.54
ATG4D-204ENST00000586417 A0A1B0GVX0 72 aa11.67□□□□□ -0.54
ATG4D-204ENST00000586417 C1orf195Q5TG92 126 aa11.67□□□□□ -0.54
ATG4D-204ENST00000586417 SPAG11AQ6PDA7 123 aa11.64□□□□□ -0.55
ATG4D-204ENST00000586417 DMBT1Q9UGM3 2413 aaPredicted RBP11.64□□□□□ -0.55
ATG4D-204ENST00000586417 CASC2Q6XLA1 102 aa11.64□□□□□ -0.55
ATG4D-204ENST00000586417 IGHV6-1A0A0B4J1U7 121 aa11.63□□□□□ -0.55
ATG4D-204ENST00000586417 RPS29P62273 56 aaKnown RBP11.63□□□□□ -0.55
ATG4D-204ENST00000586417 C8orf17Q9NRJ1 99 aa11.63□□□□□ -0.55
ATG4D-204ENST00000586417 NOTCH2NLQ7Z3S9 236 aa11.59□□□□□ -0.55
ATG4D-204ENST00000586417 hDV103S1A0JD37 113 aa11.58□□□□□ -0.56
ATG4D-204ENST00000586417 J3QL48 77 aa11.56□□□□□ -0.56
ATG4D-204ENST00000586417 C20orf197Q8N268 126 aa11.53□□□□□ -0.56
ATG4D-204ENST00000586417 CYSTM1Q9H1C7 97 aa11.52□□□□□ -0.57
ATG4D-204ENST00000586417 C8orf87E5RJ46 101 aa11.5□□□□□ -0.57
ATG4D-204ENST00000586417 TMEM254Q8TBM7 123 aa11.49□□□□□ -0.57
ATG4D-204ENST00000586417 MRPL34Q9BQ48 92 aaKnown RBP11.48□□□□□ -0.57
ATG4D-204ENST00000586417 KLKP1Q107X0 134 aa11.46□□□□□ -0.58
ATG4D-204ENST00000586417 LINC00313P59037 77 aa11.44□□□□□ -0.58
ATG4D-204ENST00000586417 SNURFQ9Y675 71 aa11.44□□□□□ -0.58
ATG4D-204ENST00000586417 A0A0U1RQV1 116 aa11.42□□□□□ -0.58
ATG4D-204ENST00000586417 C5orf47Q569G3 176 aa11.41□□□□□ -0.58
ATG4D-204ENST00000586417 RETNLBQ9BQ08 111 aa11.39□□□□□ -0.59
ATG4D-204ENST00000586417 KRTAP16-1A8MUX0 517 aa11.39□□□□□ -0.59
ATG4D-204ENST00000586417 TP53AIP1Q9HCN2 124 aa11.39□□□□□ -0.59
ATG4D-204ENST00000586417 HERC1Q15751 4861 aa11.38□□□□□ -0.59
ATG4D-204ENST00000586417 NDUFS5O43920 106 aa11.36□□□□□ -0.59
ATG4D-204ENST00000586417 ZCCHC13Q8WW36 166 aaKnown RBP11.35□□□□□ -0.59
ATG4D-204ENST00000586417 H0Y9P7 68 aa11.33□□□□□ -0.59
ATG4D-204ENST00000586417 H7BZZ5 65 aa11.33□□□□□ -0.59
ATG4D-204ENST00000586417 Q8N9P0 234 aaPredicted RBP11.33□□□□□ -0.59
ATG4D-204ENST00000586417 TRAV22A0A0B4J277 110 aa11.32□□□□□ -0.6
ATG4D-204ENST00000586417 MP68P56378 58 aa11.32□□□□□ -0.6
ATG4D-204ENST00000586417 NDUFC1O43677 76 aa11.28□□□□□ -0.6
ATG4D-204ENST00000586417 LINC00208Q96KT6 92 aa11.28□□□□□ -0.6
ATG4D-204ENST00000586417 H3BPC8 53 aa11.27□□□□□ -0.61
ATG4D-204ENST00000586417 TMEM258P61165 79 aa11.26□□□□□ -0.61
ATG4D-204ENST00000586417 KRTAP13-3Q3SY46 172 aa11.26□□□□□ -0.61
ATG4D-204ENST00000586417 Q5W150 140 aa11.25□□□□□ -0.61
ATG4D-204ENST00000586417 FP248Q71RG6 208 aaPredicted RBP11.23□□□□□ -0.61
ATG4D-204ENST00000586417 C1orf64Q8NEQ6 169 aa11.22□□□□□ -0.61
ATG4D-204ENST00000586417 PRR4Q16378 134 aa11.21□□□□□ -0.61
ATG4D-204ENST00000586417 C9orf92A6NGG3 77 aa11.2□□□□□ -0.62
ATG4D-204ENST00000586417 IGLV7-46A0A075B6I9 117 aa11.16□□□□□ -0.62
ATG4D-204ENST00000586417 FAM236DA0A1B0GTK5 79 aa11.13□□□□□ -0.63
ATG4D-204ENST00000586417 FAM236CP0DP71 79 aa11.13□□□□□ -0.63
ATG4D-204ENST00000586417 C20orf166-AS1Q96NR2 134 aa11.12□□□□□ -0.63
ATG4D-204ENST00000586417 A8MUU9 505 aa11.11□□□□□ -0.63
ATG4D-204ENST00000586417 LPAP08519 4548 aa11.1□□□□□ -0.63
ATG4D-204ENST00000586417 HMCN2Q8NDA2 5059 aa11.1□□□□□ -0.63
ATG4D-204ENST00000586417 LOC101927531A0A1B0GV80 90 aa11.08□□□□□ -0.64
ATG4D-204ENST00000586417 ATP5EP56381 51 aaPredicted RBP11.05□□□□□ -0.64
ATG4D-204ENST00000586417 CYP4F30PQ9H0H9 118 aa11.03□□□□□ -0.64
ATG4D-204ENST00000586417 PCOTHQ58A44 107 aa11.03□□□□□ -0.64
ATG4D-204ENST00000586417 IGKV2-30P06310 120 aa11.02□□□□□ -0.65
ATG4D-204ENST00000586417 TPRXLQ17RH7 258 aa11.01□□□□□ -0.65
ATG4D-204ENST00000586417 SPANXA2-OT1Q8N9U9 137 aa11□□□□□ -0.65
ATG4D-204ENST00000586417 Q75L30 129 aa10.99□□□□□ -0.65
ATG4D-204ENST00000586417 LRP2P98164 4655 aa10.96□□□□□ -0.65
ATG4D-204ENST00000586417 RPS28P62857 69 aaKnown RBP10.93□□□□□ -0.66
ATG4D-204ENST00000586417 XP32Q5T750 250 aa10.93□□□□□ -0.66
ATG4D-204ENST00000586417 IGKV2D-30A0A075B6S6 120 aa10.92□□□□□ -0.66
ATG4D-204ENST00000586417 SERP1Q9Y6X1 66 aa10.92□□□□□ -0.66
ATG4D-204ENST00000586417 RPL37P61927 97 aaKnown RBP10.88□□□□□ -0.67
ATG4D-204ENST00000586417 HRES1P13985 223 aa10.86□□□□□ -0.67
ATG4D-204ENST00000586417 C7orf65Q6ZTY9 151 aa10.85□□□□□ -0.67
ATG4D-204ENST00000586417 ATP11AUNQ6ZP68 121 aa10.79□□□□□ -0.68
ATG4D-204ENST00000586417 SPINK7P58062 85 aa10.75□□□□□ -0.69
ATG4D-204ENST00000586417 UBR4Q5T4S7 5183 aa10.74□□□□□ -0.69
ATG4D-204ENST00000586417 DMAC1Q96GE9 116 aa10.72□□□□□ -0.69
ATG4D-204ENST00000586417 COA5Q86WW8 74 aa10.68□□□□□ -0.7
ATG4D-204ENST00000586417 C4orf26Q17RF5 130 aa10.65□□□□□ -0.71
ATG4D-204ENST00000586417 SMIM26A0A096LP01 95 aa10.64□□□□□ -0.71
ATG4D-204ENST00000586417 MUC17Q685J3 4493 aa10.63□□□□□ -0.71
ATG4D-204ENST00000586417 ACYP2P14621 99 aa10.62□□□□□ -0.71
ATG4D-204ENST00000586417 SEC61BP60468 96 aaKnown RBP10.62□□□□□ -0.71
ATG4D-204ENST00000586417 MUC2Q02817 5179 aa10.58□□□□□ -0.72
ATG4D-204ENST00000586417 RNF213Q63HN8 5207 aa10.56□□□□□ -0.72
ATG4D-204ENST00000586417 KRTAP4-1Q9BYQ7 146 aa10.54□□□□□ -0.72
ATG4D-204ENST00000586417 KRTAP3-1Q9BYR8 98 aa10.54□□□□□ -0.72
ATG4D-204ENST00000586417 A8MUN3 132 aa10.54□□□□□ -0.72
ATG4D-204ENST00000586417 COX6B2Q6YFQ2 88 aa10.49□□□□□ -0.73
ATG4D-204ENST00000586417 MPLKIPQ8TAP9 179 aa10.45□□□□□ -0.74
ATG4D-204ENST00000586417 CHKB-CPT1BH3BT56 60 aa10.44□□□□□ -0.74
ATG4D-204ENST00000586417 Q1T7F1 81 aa10.42□□□□□ -0.74
ATG4D-204ENST00000586417 V9GYY9 64 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms