RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 NOTCH2NLQ7Z3S9 236 aa3.33□□□□□ -1.88
RTTN-209ENST00000583043 SPINT4Q6UDR6 99 aa3.33□□□□□ -1.88
RTTN-209ENST00000583043 C9orf92A6NGG3 77 aa3.33□□□□□ -1.88
RTTN-209ENST00000583043 SPINK7P58062 85 aa3.32□□□□□ -1.88
RTTN-209ENST00000583043 LRBAP50851 2863 aa3.32□□□□□ -1.88
RTTN-209ENST00000583043 NOTCH1P46531 2555 aa3.32□□□□□ -1.88
RTTN-209ENST00000583043 A8MUU9 505 aa3.32□□□□□ -1.88
RTTN-209ENST00000583043 DCHS2Q6V1P9 2916 aa3.32□□□□□ -1.88
RTTN-209ENST00000583043 C20orf166-AS1Q96NR2 134 aa3.32□□□□□ -1.88
RTTN-209ENST00000583043 ZZEF1O43149 2961 aa3.31□□□□□ -1.88
RTTN-209ENST00000583043 Q8N1X5 172 aa3.31□□□□□ -1.88
RTTN-209ENST00000583043 RELNP78509 3460 aa3.31□□□□□ -1.88
RTTN-209ENST00000583043 SEC61BP60468 96 aaKnown RBP3.31□□□□□ -1.88
RTTN-209ENST00000583043 NBEAL2Q6ZNJ1 2754 aa3.31□□□□□ -1.88
RTTN-209ENST00000583043 PDZD2O15018 2839 aa3.31□□□□□ -1.88
RTTN-209ENST00000583043 ZFHX3Q15911 3703 aa3.31□□□□□ -1.88
RTTN-209ENST00000583043 CSMD1Q96PZ7 3565 aa3.31□□□□□ -1.88
RTTN-209ENST00000583043 KRTAP1-4P0C5Y4 121 aa3.3□□□□□ -1.88
RTTN-209ENST00000583043 COL12A1Q99715 3063 aa3.29□□□□□ -1.88
RTTN-209ENST00000583043 ZANQ9Y493 2812 aa3.29□□□□□ -1.88
RTTN-209ENST00000583043 CRIPTQ9P021 101 aa3.29□□□□□ -1.88
RTTN-209ENST00000583043 CSAG1Q6PB30 78 aa3.28□□□□□ -1.88
RTTN-209ENST00000583043 TACC2O95359 2948 aa3.28□□□□□ -1.88
RTTN-209ENST00000583043 FBN2P35556 2912 aa3.28□□□□□ -1.88
RTTN-209ENST00000583043 S4R3F8 94 aa3.27□□□□□ -1.89
RTTN-209ENST00000583043 MXRA5Q9NR99 2828 aa3.27□□□□□ -1.89
RTTN-209ENST00000583043 A6NN06 94 aa3.27□□□□□ -1.89
RTTN-209ENST00000583043 KRTAP13-3Q3SY46 172 aa3.27□□□□□ -1.89
RTTN-209ENST00000583043 H1FX-AS1Q4G0G2 97 aa3.27□□□□□ -1.89
RTTN-209ENST00000583043 KRTAP16-1A8MUX0 517 aa3.26□□□□□ -1.89
RTTN-209ENST00000583043 SVEP1Q4LDE5 3571 aa3.26□□□□□ -1.89
RTTN-209ENST00000583043 BAHCC1Q9P281 2608 aa3.26□□□□□ -1.89
RTTN-209ENST00000583043 ASH1LQ9NR48 2969 aaKnown RBP3.25□□□□□ -1.89
RTTN-209ENST00000583043 RPL37P61927 97 aaKnown RBP3.24□□□□□ -1.89
RTTN-209ENST00000583043 STAB2Q8WWQ8 2551 aa3.24□□□□□ -1.89
RTTN-209ENST00000583043 NBEAL1Q6ZS30 2694 aa3.23□□□□□ -1.89
RTTN-209ENST00000583043 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
RTTN-209ENST00000583043 PLAC4Q8WY50 150 aa3.22□□□□□ -1.89
RTTN-209ENST00000583043 VPS13CQ709C8 3753 aa3.22□□□□□ -1.89
RTTN-209ENST00000583043 M0QZ58 72 aa3.19□□□□□ -1.9
RTTN-209ENST00000583043 CELSR1Q9NYQ6 3014 aa3.19□□□□□ -1.9
RTTN-209ENST00000583043 ROMO1P60602 79 aa3.18□□□□□ -1.9
RTTN-209ENST00000583043 ANK3Q12955 4377 aaKnown RBP3.17□□□□□ -1.9
RTTN-209ENST00000583043 A0A1B0GVY2 172 aa3.17□□□□□ -1.9
RTTN-209ENST00000583043 CELSR2Q9HCU4 2923 aa3.16□□□□□ -1.9
RTTN-209ENST00000583043 NF1P21359 2839 aa3.16□□□□□ -1.9
RTTN-209ENST00000583043 TENM4Q6N022 2769 aa3.15□□□□□ -1.9
RTTN-209ENST00000583043 TPRXLQ17RH7 258 aa3.14□□□□□ -1.91
RTTN-209ENST00000583043 OTOGQ6ZRI0 2925 aa3.13□□□□□ -1.91
RTTN-209ENST00000583043 TENM3Q9P273 2699 aa3.13□□□□□ -1.91
RTTN-209ENST00000583043 CRYBG3Q68DQ2 2970 aa3.13□□□□□ -1.91
RTTN-209ENST00000583043 KRTAP10-8P60410 259 aa3.12□□□□□ -1.91
RTTN-209ENST00000583043 R4GN34 69 aa3.11□□□□□ -1.91
RTTN-209ENST00000583043 A0A0D9SG42 100 aa3.1□□□□□ -1.91
RTTN-209ENST00000583043 XP32Q5T750 250 aa3.1□□□□□ -1.91
RTTN-209ENST00000583043 CSMD2Q7Z408 3487 aa3.1□□□□□ -1.91
RTTN-209ENST00000583043 AKAP9Q99996 3911 aa3.09□□□□□ -1.91
RTTN-209ENST00000583043 KRTAP25-1Q3LHN0 102 aa3.09□□□□□ -1.91
RTTN-209ENST00000583043 PRAC1Q96KF2 57 aa3.09□□□□□ -1.92
RTTN-209ENST00000583043 TENM1Q9UKZ4 2725 aa3.08□□□□□ -1.92
RTTN-209ENST00000583043 ADM2Q7Z4H4 148 aa3.08□□□□□ -1.92
RTTN-209ENST00000583043 H0YAA0 97 aa3.05□□□□□ -1.92
RTTN-209ENST00000583043 NBPF19A0A087WUL8 3843 aa3.04□□□□□ -1.92
RTTN-209ENST00000583043 VWFP04275 2813 aa3.04□□□□□ -1.92
RTTN-209ENST00000583043 A8MU10 97 aa3.02□□□□□ -1.93
RTTN-209ENST00000583043 PP632Q6XCG6 107 aa3.02□□□□□ -1.93
RTTN-209ENST00000583043 ZNF469Q96JG9 3925 aaPredicted RBP2.99□□□□□ -1.93
RTTN-209ENST00000583043 KRTAP10-4P60372 401 aaPredicted RBP2.98□□□□□ -1.93
RTTN-209ENST00000583043 CUBNO60494 3623 aa2.98□□□□□ -1.93
RTTN-209ENST00000583043 DMBT1Q9UGM3 2413 aaPredicted RBP2.97□□□□□ -1.93
RTTN-209ENST00000583043 KRTAP3-1Q9BYR8 98 aa2.95□□□□□ -1.94
RTTN-209ENST00000583043 ALMS1Q8TCU4 4167 aa2.95□□□□□ -1.94
RTTN-209ENST00000583043 HUWE1Q7Z6Z7 4374 aaKnown RBP2.93□□□□□ -1.94
RTTN-209ENST00000583043 FBN1P35555 2871 aaKnown RBP2.93□□□□□ -1.94
RTTN-209ENST00000583043 TNP1P09430 55 aa2.9□□□□□ -1.94
RTTN-209ENST00000583043 MT1HL1P0DM35 61 aa2.88□□□□□ -1.95
RTTN-209ENST00000583043 DNAH10Q8IVF4 4471 aa2.87□□□□□ -1.95
RTTN-209ENST00000583043 KRTAP10-6P60371 365 aaPredicted RBP2.87□□□□□ -1.95
RTTN-209ENST00000583043 P0C880 135 aa2.87□□□□□ -1.95
RTTN-209ENST00000583043 TGP01266 2768 aa2.87□□□□□ -1.95
RTTN-209ENST00000583043 TENM2Q9NT68 2774 aa2.87□□□□□ -1.95
RTTN-209ENST00000583043 DNAH9Q9NYC9 4486 aa2.87□□□□□ -1.95
RTTN-209ENST00000583043 FLG2Q5D862 2391 aaPredicted RBP2.86□□□□□ -1.95
RTTN-209ENST00000583043 MEGF8Q7Z7M0 2845 aa2.86□□□□□ -1.95
RTTN-209ENST00000583043 KRTAP10-10P60014 251 aa2.85□□□□□ -1.95
RTTN-209ENST00000583043 VPS13DQ5THJ4 4388 aa2.85□□□□□ -1.95
RTTN-209ENST00000583043 DNAH17Q9UFH2 4485 aa2.84□□□□□ -1.95
RTTN-209ENST00000583043 PRO2289Q9P1D8 64 aa2.83□□□□□ -1.96
RTTN-209ENST00000583043 FBN3Q75N90 2809 aa2.83□□□□□ -1.96
RTTN-209ENST00000583043 KRTAP12-1P59990 96 aa2.83□□□□□ -1.96
RTTN-209ENST00000583043 PKD1L1Q8TDX9 2849 aa2.82□□□□□ -1.96
RTTN-209ENST00000583043 KRTAP3-3Q9BYR6 98 aa2.82□□□□□ -1.96
RTTN-209ENST00000583043 DNAH2Q9P225 4427 aa2.82□□□□□ -1.96
RTTN-209ENST00000583043 KRTAP3-2Q9BYR7 98 aa2.82□□□□□ -1.96
RTTN-209ENST00000583043 KRTAP13-4Q3LI77 160 aa2.81□□□□□ -1.96
RTTN-209ENST00000583043 DNAH1Q9P2D7 4330 aa2.8□□□□□ -1.96
RTTN-209ENST00000583043 ANK2Q01484 3957 aa2.8□□□□□ -1.96
RTTN-209ENST00000583043 TRRAPQ9Y4A5 3859 aa2.8□□□□□ -1.96
RTTN-209ENST00000583043 KRTAP23-1A1A580 65 aa2.8□□□□□ -1.96
RTTN-209ENST00000583043 PLECQ15149 4684 aaKnown RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms